Experiment: LB_plus_SM_buffer with S16_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4913 and GFF4914 are separated by 95 nucleotides GFF4914 and GFF4915 overlap by 4 nucleotides GFF4915 and GFF4916 overlap by 4 nucleotides
GFF4913 - FIG00638862: hypothetical protein, at 16,020 to 17,453
GFF4913
GFF4914 - Putative nucleotide di-P-sugar epimerase or dehydratase, at 17,549 to 18,562
GFF4914
GFF4915 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 18,559 to 19,389
GFF4915
GFF4916 - FIG00639119: hypothetical protein, at 19,386 to 19,709
GFF4916
Position (kb) 17
18
19 Strain fitness (log2 ratio) -2
-1
0
1 at 16.585 kb on - strand, within GFF4913 at 16.769 kb on + strand, within GFF4913 at 17.186 kb on + strand, within GFF4913 at 17.528 kb on + strand at 17.556 kb on + strand at 17.777 kb on - strand, within GFF4914 at 17.882 kb on - strand, within GFF4914 at 18.045 kb on + strand, within GFF4914 at 18.082 kb on - strand, within GFF4914 at 18.082 kb on - strand, within GFF4914 at 18.104 kb on - strand, within GFF4914 at 18.117 kb on - strand, within GFF4914 at 18.167 kb on + strand, within GFF4914 at 18.167 kb on + strand, within GFF4914 at 18.243 kb on - strand, within GFF4914 at 18.243 kb on - strand, within GFF4914 at 18.243 kb on - strand, within GFF4914 at 18.274 kb on - strand, within GFF4914 at 18.286 kb on - strand, within GFF4914 at 18.353 kb on - strand, within GFF4914 at 18.445 kb on + strand, within GFF4914 at 18.572 kb on + strand at 18.573 kb on - strand at 18.710 kb on + strand, within GFF4915 at 18.711 kb on - strand, within GFF4915 at 18.921 kb on + strand, within GFF4915 at 18.921 kb on + strand, within GFF4915 at 18.934 kb on - strand, within GFF4915 at 18.937 kb on - strand, within GFF4915 at 19.051 kb on - strand, within GFF4915 at 19.149 kb on - strand, within GFF4915 at 19.149 kb on - strand, within GFF4915 at 19.175 kb on + strand, within GFF4915 at 19.434 kb on - strand, within GFF4916 at 19.434 kb on - strand, within GFF4916 at 19.460 kb on - strand, within GFF4916
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with S16_phage 15 MOI remove 16,585 - GFF4913 0.39 -0.6 16,769 + GFF4913 0.52 -0.2 17,186 + GFF4913 0.81 -1.5 17,528 + -1.5 17,556 + +0.6 17,777 - GFF4914 0.22 -1.2 17,882 - GFF4914 0.33 +0.2 18,045 + GFF4914 0.49 -0.6 18,082 - GFF4914 0.53 -0.6 18,082 - GFF4914 0.53 +1.2 18,104 - GFF4914 0.55 -1.5 18,117 - GFF4914 0.56 -1.1 18,167 + GFF4914 0.61 +0.1 18,167 + GFF4914 0.61 -0.3 18,243 - GFF4914 0.68 +0.8 18,243 - GFF4914 0.68 -0.6 18,243 - GFF4914 0.68 +0.1 18,274 - GFF4914 0.71 -0.5 18,286 - GFF4914 0.73 +0.5 18,353 - GFF4914 0.79 +0.2 18,445 + GFF4914 0.88 +0.7 18,572 + -0.9 18,573 - +0.3 18,710 + GFF4915 0.18 +1.7 18,711 - GFF4915 0.18 -1.3 18,921 + GFF4915 0.44 -0.7 18,921 + GFF4915 0.44 -0.1 18,934 - GFF4915 0.45 -0.9 18,937 - GFF4915 0.45 -0.6 19,051 - GFF4915 0.59 +1.5 19,149 - GFF4915 0.71 -0.2 19,149 - GFF4915 0.71 -0.2 19,175 + GFF4915 0.74 -1.1 19,434 - GFF4916 0.15 -2.6 19,434 - GFF4916 0.15 +0.7 19,460 - GFF4916 0.23 -1.6
Or see this region's nucleotide sequence