Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3273 and Echvi_3274 overlap by 4 nucleotides Echvi_3274 and Echvi_3275 are separated by 1 nucleotides Echvi_3275 and Echvi_3276 are separated by 0 nucleotides
Echvi_3273: Echvi_3273 - riboflavin kinase/FMN adenylyltransferase, at 3,878,112 to 3,879,041
_3273
Echvi_3274: Echvi_3274 - tRNA pseudouridine 55 synthase, at 3,879,038 to 3,879,712
_3274
Echvi_3275: Echvi_3275 - Uncharacterized bacitracin resistance protein, at 3,879,714 to 3,880,511
_3275
Echvi_3276: Echvi_3276 - Protein of unknown function (DUF3098)., at 3,880,512 to 3,880,679
_3276
Position (kb)
3879
3880 Strain fitness (log2 ratio)
-1
0
1
2 at 3879.142 kb on - strand, within Echvi_3274 at 3879.142 kb on - strand, within Echvi_3274 at 3879.142 kb on - strand, within Echvi_3274 at 3879.213 kb on - strand, within Echvi_3274 at 3879.213 kb on - strand, within Echvi_3274 at 3879.291 kb on - strand, within Echvi_3274 at 3879.363 kb on - strand, within Echvi_3274 at 3879.374 kb on - strand, within Echvi_3274 at 3879.392 kb on - strand, within Echvi_3274 at 3879.414 kb on - strand, within Echvi_3274 at 3879.419 kb on - strand, within Echvi_3274 at 3879.447 kb on - strand, within Echvi_3274 at 3879.447 kb on - strand, within Echvi_3274 at 3879.524 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.629 kb on - strand, within Echvi_3274 at 3879.690 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 3,879,142 - Echvi_3274 0.15 -0.1 3,879,142 - Echvi_3274 0.15 -1.0 3,879,142 - Echvi_3274 0.15 -0.9 3,879,213 - Echvi_3274 0.26 +0.7 3,879,213 - Echvi_3274 0.26 +1.4 3,879,291 - Echvi_3274 0.37 +1.4 3,879,363 - Echvi_3274 0.48 -1.3 3,879,374 - Echvi_3274 0.50 +2.3 3,879,392 - Echvi_3274 0.52 -0.4 3,879,414 - Echvi_3274 0.56 +0.2 3,879,419 - Echvi_3274 0.56 +2.0 3,879,447 - Echvi_3274 0.61 +1.6 3,879,447 - Echvi_3274 0.61 +0.4 3,879,524 - Echvi_3274 0.72 +0.9 3,879,526 - Echvi_3274 0.72 +0.0 3,879,526 - Echvi_3274 0.72 +0.4 3,879,526 - Echvi_3274 0.72 -1.0 3,879,629 - Echvi_3274 0.88 -0.8 3,879,690 - -0.9
Or see this region's nucleotide sequence