Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2542

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,018,509	-		Echvi_2541	0.17	+0.7
3,018,510	+		Echvi_2541	0.17	-1.6
3,018,510	+		Echvi_2541	0.17	+0.7
3,018,533	+		Echvi_2541	0.20	+0.3
3,018,541	+		Echvi_2541	0.21	-0.2
3,018,554	+		Echvi_2541	0.23	-0.5
3,018,577	+		Echvi_2541	0.26	+0.4
3,018,577	+		Echvi_2541	0.26	+2.1
3,018,577	+		Echvi_2541	0.26	+0.5
3,018,578	-		Echvi_2541	0.26	+0.3
3,018,679	+		Echvi_2541	0.38	+1.5
3,018,680	-		Echvi_2541	0.38	+0.9
3,018,680	-		Echvi_2541	0.38	+1.9
3,018,680	-		Echvi_2541	0.38	-0.6
3,018,680	-		Echvi_2541	0.38	-0.2
3,018,680	-		Echvi_2541	0.38	+0.5
3,018,682	-		Echvi_2541	0.38	+0.4
3,018,712	+		Echvi_2541	0.42	+0.6
3,018,712	+		Echvi_2541	0.42	-2.0
3,018,713	-		Echvi_2541	0.42	+0.2
3,018,713	-		Echvi_2541	0.42	+1.5
3,018,713	-		Echvi_2541	0.42	-2.1
3,018,713	-		Echvi_2541	0.42	-0.5
3,018,806	-		Echvi_2541	0.54	-0.3
3,018,809	-		Echvi_2541	0.54	-0.6
3,018,820	+		Echvi_2541	0.55	+0.2
3,018,853	+		Echvi_2541	0.59	-0.4
3,018,854	-		Echvi_2541	0.59	-0.7
3,018,861	+		Echvi_2541	0.60	+0.3
3,018,885	-		Echvi_2541	0.63	-1.6
3,018,887	-		Echvi_2541	0.63	+0.8
3,018,887	-		Echvi_2541	0.63	+1.0
3,018,887	-		Echvi_2541	0.63	+0.3
3,018,937	+		Echvi_2541	0.70	+1.1
3,018,937	+		Echvi_2541	0.70	-0.5
3,018,940	-		Echvi_2541	0.70	-1.2
3,018,949	+		Echvi_2541	0.71	+2.1
3,018,950	-		Echvi_2541	0.71	+0.5
3,018,950	-		Echvi_2541	0.71	+0.5
3,018,950	-		Echvi_2541	0.71	+0.2
3,018,950	-		Echvi_2541	0.71	-0.9
3,018,950	-		Echvi_2541	0.71	+0.8
3,018,951	+		Echvi_2541	0.71	+0.3
3,018,992	+		Echvi_2541	0.76	-1.5
3,019,012	+		Echvi_2541	0.79	-0.1
3,019,012	+		Echvi_2541	0.79	-0.6
3,019,012	+		Echvi_2541	0.79	+2.7
3,019,012	+		Echvi_2541	0.79	+0.6
3,019,013	-		Echvi_2541	0.79	-1.0
3,019,013	-		Echvi_2541	0.79	+0.4
3,019,035	+		Echvi_2541	0.82	+1.2
3,019,036	-		Echvi_2541	0.82	+2.3
3,019,045	+		Echvi_2541	0.83	-1.1
3,019,045	+		Echvi_2541	0.83	+1.2
3,019,102	-		Echvi_2541	0.90	+0.3
3,019,219	+				+1.0
3,019,220	-				-0.5
3,019,220	-				-1.1
3,019,285	+				-2.4
3,019,288	+				-0.8
3,019,289	-				-0.1
3,019,306	+				-1.2
3,019,306	+				-0.8
3,019,343	+				+0.2
3,019,345	+				-0.6
3,019,345	+				+0.2
3,019,345	+				+0.4
3,019,345	+				-0.5
3,019,345	+				-0.7
3,019,346	-				-1.1
3,019,346	-				+0.2
3,019,346	-				+0.2
3,019,346	-				-1.4
3,019,346	-				+0.7
3,019,353	+				+2.1
3,019,354	-				+0.8
3,019,358	+				+0.3
3,019,358	+				-1.1
3,019,387	+				+1.2
3,019,387	+				+0.3
3,019,388	-				-2.5
3,019,462	+				+1.1
3,019,526	+		Echvi_2542	0.38	-1.0
3,019,526	+		Echvi_2542	0.38	+2.7
3,019,527	-		Echvi_2542	0.38	+0.2
3,019,527	-		Echvi_2542	0.38	-1.2
3,019,527	-		Echvi_2542	0.38	+0.6
3,019,527	-		Echvi_2542	0.38	-1.5
3,019,527	-		Echvi_2542	0.38	-0.1
3,019,531	+		Echvi_2542	0.40	-1.8
3,019,532	-		Echvi_2542	0.41	+0.8
3,019,532	-		Echvi_2542	0.41	-0.9
3,019,535	-		Echvi_2542	0.42	-0.8
3,019,535	-		Echvi_2542	0.42	-0.5
3,019,627	+		Echvi_2542	0.89	-0.3
3,019,628	-		Echvi_2542	0.89	-0.6
3,019,628	-		Echvi_2542	0.89	-2.2
3,019,646	+				+0.1
3,019,653	+				+0.7
3,019,654	-				-1.3
3,019,661	-		Echvi_2543	0.13	-0.3
3,019,763	-		Echvi_2543	0.68	+1.7
3,019,767	-		Echvi_2543	0.70	-1.6
3,019,794	+		Echvi_2543	0.85	-2.2
3,019,971	+				+1.5
3,019,995	+				-0.9
3,019,996	-				-0.1
3,020,003	-				-0.0
3,020,018	+				-0.3
3,020,060	+				+0.0
3,020,060	+				+0.1
3,020,131	+		Echvi_2544	0.12	-0.5
3,020,174	-		Echvi_2544	0.15	+0.1
3,020,207	-		Echvi_2544	0.18	-0.7
3,020,211	+		Echvi_2544	0.19	+2.1
3,020,211	+		Echvi_2544	0.19	+0.3
3,020,212	-		Echvi_2544	0.19	-0.9
3,020,212	-		Echvi_2544	0.19	-0.4
3,020,212	-		Echvi_2544	0.19	-1.5
3,020,212	-		Echvi_2544	0.19	+3.5
3,020,212	-		Echvi_2544	0.19	-0.8
3,020,218	-		Echvi_2544	0.19	+0.7
3,020,218	-		Echvi_2544	0.19	+1.8
3,020,218	-		Echvi_2544	0.19	+0.1
3,020,218	-		Echvi_2544	0.19	-0.4
3,020,218	-		Echvi_2544	0.19	+0.5
3,020,266	+		Echvi_2544	0.23	-1.6
3,020,278	-		Echvi_2544	0.24	-2.2
3,020,278	-		Echvi_2544	0.24	+0.5
3,020,323	-		Echvi_2544	0.28	-0.6
3,020,334	+		Echvi_2544	0.29	-1.2
3,020,336	+		Echvi_2544	0.29	+0.1
3,020,481	-		Echvi_2544	0.41	-1.4
3,020,515	+		Echvi_2544	0.44	-2.9
3,020,515	+		Echvi_2544	0.44	-0.2
3,020,515	+		Echvi_2544	0.44	+0.0
3,020,515	+		Echvi_2544	0.44	-1.5
3,020,515	+		Echvi_2544	0.44	-0.1
3,020,515	+		Echvi_2544	0.44	-0.2
3,020,515	+		Echvi_2544	0.44	+0.1
3,020,515	+		Echvi_2544	0.44	-1.4
3,020,515	+		Echvi_2544	0.44	+0.1
3,020,516	-		Echvi_2544	0.44	+1.6
3,020,516	-		Echvi_2544	0.44	-0.2
3,020,516	-		Echvi_2544	0.44	-0.0
3,020,516	-		Echvi_2544	0.44	+2.3
3,020,516	-		Echvi_2544	0.44	-0.7
3,020,516	-		Echvi_2544	0.44	+0.3
3,020,516	-		Echvi_2544	0.44	-0.3
3,020,517	+		Echvi_2544	0.45	+0.6
3,020,517	+		Echvi_2544	0.45	+0.5
3,020,517	+		Echvi_2544	0.45	+0.8
3,020,518	-		Echvi_2544	0.45	-1.5
3,020,518	-		Echvi_2544	0.45	-1.6
3,020,518	-		Echvi_2544	0.45	-1.4
3,020,518	-		Echvi_2544	0.45	+0.4
3,020,558	+		Echvi_2544	0.48	-2.3
3,020,583	+		Echvi_2544	0.50	-0.3