Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0564 and Echvi_0565 are separated by 231 nucleotides Echvi_0565 and Echvi_0566 are separated by 590 nucleotides
Echvi_0564: Echvi_0564 - ribosomal protein S12 methylthiotransferase RimO, at 637,698 to 639,011
_0564
Echvi_0565: Echvi_0565 - Predicted dehydrogenases and related proteins, at 639,243 to 640,709
_0565
Echvi_0566: Echvi_0566 - TonB-dependent receptor for glucose (SusC-like) <small>(from data)</small>, at 641,300 to 644,539
_0566
Position (kb) 639
640
641 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 638.246 kb on + strand, within Echvi_0564 at 638.247 kb on - strand, within Echvi_0564 at 638.259 kb on - strand, within Echvi_0564 at 638.312 kb on + strand, within Echvi_0564 at 638.324 kb on - strand, within Echvi_0564 at 638.324 kb on - strand, within Echvi_0564 at 638.416 kb on + strand, within Echvi_0564 at 638.416 kb on + strand, within Echvi_0564 at 638.416 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.581 kb on + strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.582 kb on - strand, within Echvi_0564 at 638.587 kb on + strand, within Echvi_0564 at 638.587 kb on + strand, within Echvi_0564 at 638.633 kb on + strand, within Echvi_0564 at 638.633 kb on + strand, within Echvi_0564 at 638.633 kb on + strand, within Echvi_0564 at 638.634 kb on - strand, within Echvi_0564 at 638.634 kb on - strand, within Echvi_0564 at 638.658 kb on + strand, within Echvi_0564 at 638.659 kb on - strand, within Echvi_0564 at 638.728 kb on + strand, within Echvi_0564 at 638.729 kb on - strand, within Echvi_0564 at 638.755 kb on + strand, within Echvi_0564 at 638.811 kb on + strand, within Echvi_0564 at 638.812 kb on - strand, within Echvi_0564 at 638.812 kb on - strand, within Echvi_0564 at 638.812 kb on - strand, within Echvi_0564 at 638.850 kb on - strand, within Echvi_0564 at 638.858 kb on + strand, within Echvi_0564 at 638.858 kb on + strand, within Echvi_0564 at 638.859 kb on - strand at 638.867 kb on + strand, within Echvi_0564 at 638.870 kb on + strand, within Echvi_0564 at 638.870 kb on + strand, within Echvi_0564 at 638.979 kb on + strand at 638.980 kb on - strand at 638.980 kb on - strand at 639.044 kb on + strand at 639.061 kb on + strand at 639.063 kb on + strand at 639.064 kb on - strand at 639.064 kb on - strand at 639.094 kb on + strand at 639.126 kb on + strand at 639.126 kb on + strand at 639.233 kb on + strand at 639.233 kb on + strand at 639.234 kb on - strand at 639.235 kb on + strand at 639.235 kb on + strand at 639.277 kb on - strand at 639.281 kb on - strand at 639.353 kb on - strand at 639.353 kb on - strand at 639.372 kb on - strand at 639.372 kb on - strand at 639.390 kb on - strand, within Echvi_0565 at 639.391 kb on + strand, within Echvi_0565 at 639.392 kb on - strand, within Echvi_0565 at 639.418 kb on - strand, within Echvi_0565 at 639.497 kb on + strand, within Echvi_0565 at 639.591 kb on + strand, within Echvi_0565 at 639.591 kb on + strand, within Echvi_0565 at 639.591 kb on + strand, within Echvi_0565 at 639.592 kb on - strand, within Echvi_0565 at 639.592 kb on - strand, within Echvi_0565 at 639.611 kb on + strand, within Echvi_0565 at 639.612 kb on - strand, within Echvi_0565 at 639.615 kb on - strand, within Echvi_0565 at 639.710 kb on + strand, within Echvi_0565 at 639.710 kb on + strand, within Echvi_0565 at 639.711 kb on - strand, within Echvi_0565 at 639.711 kb on - strand, within Echvi_0565 at 639.711 kb on - strand, within Echvi_0565 at 639.711 kb on - strand, within Echvi_0565 at 639.767 kb on + strand, within Echvi_0565 at 639.801 kb on - strand, within Echvi_0565 at 639.856 kb on + strand, within Echvi_0565 at 639.857 kb on - strand, within Echvi_0565 at 639.857 kb on - strand, within Echvi_0565 at 639.872 kb on + strand, within Echvi_0565 at 639.908 kb on + strand, within Echvi_0565 at 639.918 kb on + strand, within Echvi_0565 at 639.918 kb on + strand, within Echvi_0565 at 639.918 kb on + strand, within Echvi_0565 at 639.919 kb on - strand, within Echvi_0565 at 639.919 kb on - strand, within Echvi_0565 at 639.919 kb on - strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.939 kb on + strand, within Echvi_0565 at 639.940 kb on - strand, within Echvi_0565 at 639.940 kb on - strand, within Echvi_0565 at 639.940 kb on - strand, within Echvi_0565 at 639.996 kb on + strand, within Echvi_0565 at 639.996 kb on + strand, within Echvi_0565 at 639.996 kb on + strand, within Echvi_0565 at 639.996 kb on + strand, within Echvi_0565 at 639.996 kb on + strand, within Echvi_0565 at 639.997 kb on - strand, within Echvi_0565 at 639.997 kb on - strand, within Echvi_0565 at 640.009 kb on + strand, within Echvi_0565 at 640.014 kb on + strand, within Echvi_0565 at 640.019 kb on + strand, within Echvi_0565 at 640.020 kb on - strand, within Echvi_0565 at 640.020 kb on - strand, within Echvi_0565 at 640.039 kb on - strand, within Echvi_0565 at 640.067 kb on + strand, within Echvi_0565 at 640.274 kb on + strand, within Echvi_0565 at 640.300 kb on + strand, within Echvi_0565 at 640.300 kb on + strand, within Echvi_0565 at 640.300 kb on + strand, within Echvi_0565 at 640.301 kb on - strand, within Echvi_0565 at 640.301 kb on - strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.302 kb on + strand, within Echvi_0565 at 640.303 kb on - strand, within Echvi_0565 at 640.303 kb on - strand, within Echvi_0565 at 640.303 kb on - strand, within Echvi_0565 at 640.303 kb on - strand, within Echvi_0565 at 640.303 kb on - strand, within Echvi_0565 at 640.347 kb on + strand, within Echvi_0565 at 640.348 kb on - strand, within Echvi_0565 at 640.348 kb on - strand, within Echvi_0565 at 640.348 kb on - strand, within Echvi_0565 at 640.348 kb on - strand, within Echvi_0565 at 640.348 kb on - strand, within Echvi_0565 at 640.420 kb on + strand, within Echvi_0565 at 640.420 kb on + strand, within Echvi_0565 at 640.421 kb on - strand, within Echvi_0565 at 640.477 kb on - strand, within Echvi_0565 at 640.714 kb on + strand at 640.716 kb on + strand at 640.717 kb on - strand at 640.910 kb on + strand at 640.928 kb on + strand at 640.932 kb on - strand at 640.951 kb on + strand at 641.046 kb on + strand at 641.054 kb on + strand at 641.055 kb on - strand at 641.090 kb on - strand at 641.120 kb on + strand at 641.120 kb on + strand at 641.120 kb on + strand at 641.120 kb on + strand at 641.148 kb on - strand at 641.172 kb on - strand at 641.177 kb on + strand at 641.198 kb on + strand at 641.198 kb on + strand at 641.204 kb on - strand at 641.204 kb on - strand at 641.204 kb on - strand at 641.204 kb on - strand at 641.225 kb on + strand at 641.245 kb on + strand at 641.245 kb on + strand at 641.277 kb on + strand at 641.278 kb on - strand at 641.284 kb on - strand at 641.287 kb on + strand at 641.293 kb on + strand at 641.350 kb on + strand at 641.398 kb on - strand at 641.455 kb on + strand at 641.455 kb on + strand at 641.455 kb on + strand at 641.456 kb on - strand at 641.456 kb on - strand at 641.508 kb on - strand at 641.520 kb on + strand at 641.521 kb on - strand at 641.521 kb on - strand at 641.533 kb on + strand at 641.558 kb on + strand at 641.599 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 638,246 + Echvi_0564 0.42 +2.2 638,247 - Echvi_0564 0.42 -1.1 638,259 - Echvi_0564 0.43 +1.8 638,312 + Echvi_0564 0.47 -1.2 638,324 - Echvi_0564 0.48 +0.1 638,324 - Echvi_0564 0.48 +0.5 638,416 + Echvi_0564 0.55 -0.2 638,416 + Echvi_0564 0.55 -1.1 638,416 + Echvi_0564 0.55 +0.7 638,581 + Echvi_0564 0.67 +1.6 638,581 + Echvi_0564 0.67 +0.7 638,581 + Echvi_0564 0.67 +0.4 638,581 + Echvi_0564 0.67 -1.2 638,581 + Echvi_0564 0.67 +0.3 638,581 + Echvi_0564 0.67 -0.6 638,581 + Echvi_0564 0.67 +1.4 638,581 + Echvi_0564 0.67 +2.0 638,582 - Echvi_0564 0.67 +0.5 638,582 - Echvi_0564 0.67 +0.6 638,582 - Echvi_0564 0.67 +2.8 638,582 - Echvi_0564 0.67 -0.3 638,582 - Echvi_0564 0.67 +0.8 638,582 - Echvi_0564 0.67 -3.7 638,582 - Echvi_0564 0.67 -0.1 638,582 - Echvi_0564 0.67 +0.4 638,582 - Echvi_0564 0.67 +0.6 638,582 - Echvi_0564 0.67 -0.1 638,582 - Echvi_0564 0.67 +0.5 638,587 + Echvi_0564 0.68 +0.8 638,587 + Echvi_0564 0.68 -1.4 638,633 + Echvi_0564 0.71 +1.6 638,633 + Echvi_0564 0.71 +0.6 638,633 + Echvi_0564 0.71 +1.5 638,634 - Echvi_0564 0.71 +0.1 638,634 - Echvi_0564 0.71 +1.0 638,658 + Echvi_0564 0.73 +1.6 638,659 - Echvi_0564 0.73 +0.8 638,728 + Echvi_0564 0.78 -0.5 638,729 - Echvi_0564 0.78 -0.1 638,755 + Echvi_0564 0.80 +1.1 638,811 + Echvi_0564 0.85 +0.6 638,812 - Echvi_0564 0.85 +0.5 638,812 - Echvi_0564 0.85 -1.5 638,812 - Echvi_0564 0.85 -0.5 638,850 - Echvi_0564 0.88 -1.5 638,858 + Echvi_0564 0.88 +0.5 638,858 + Echvi_0564 0.88 +1.8 638,859 - +0.1 638,867 + Echvi_0564 0.89 -1.2 638,870 + Echvi_0564 0.89 +1.4 638,870 + Echvi_0564 0.89 +0.4 638,979 + +1.9 638,980 - -1.7 638,980 - +0.1 639,044 + +0.3 639,061 + +0.8 639,063 + -0.9 639,064 - -1.5 639,064 - -0.9 639,094 + -0.9 639,126 + -1.2 639,126 + +0.5 639,233 + +0.9 639,233 + +1.9 639,234 - -0.9 639,235 + +1.4 639,235 + -1.5 639,277 - +1.4 639,281 - -1.2 639,353 - -1.7 639,353 - -1.5 639,372 - +0.5 639,372 - -1.7 639,390 - Echvi_0565 0.10 +2.5 639,391 + Echvi_0565 0.10 -0.6 639,392 - Echvi_0565 0.10 +0.9 639,418 - Echvi_0565 0.12 +1.1 639,497 + Echvi_0565 0.17 -0.7 639,591 + Echvi_0565 0.24 -0.9 639,591 + Echvi_0565 0.24 -1.7 639,591 + Echvi_0565 0.24 -0.6 639,592 - Echvi_0565 0.24 +1.3 639,592 - Echvi_0565 0.24 +0.4 639,611 + Echvi_0565 0.25 -2.0 639,612 - Echvi_0565 0.25 +1.1 639,615 - Echvi_0565 0.25 +0.2 639,710 + Echvi_0565 0.32 +1.4 639,710 + Echvi_0565 0.32 +0.4 639,711 - Echvi_0565 0.32 -0.7 639,711 - Echvi_0565 0.32 -0.3 639,711 - Echvi_0565 0.32 -1.1 639,711 - Echvi_0565 0.32 +2.4 639,767 + Echvi_0565 0.36 +0.5 639,801 - Echvi_0565 0.38 -1.5 639,856 + Echvi_0565 0.42 -0.2 639,857 - Echvi_0565 0.42 +0.4 639,857 - Echvi_0565 0.42 -1.2 639,872 + Echvi_0565 0.43 +2.9 639,908 + Echvi_0565 0.45 -0.2 639,918 + Echvi_0565 0.46 -0.3 639,918 + Echvi_0565 0.46 +1.6 639,918 + Echvi_0565 0.46 -1.8 639,919 - Echvi_0565 0.46 +0.9 639,919 - Echvi_0565 0.46 -0.5 639,919 - Echvi_0565 0.46 -0.7 639,939 + Echvi_0565 0.47 +0.9 639,939 + Echvi_0565 0.47 +0.7 639,939 + Echvi_0565 0.47 +0.9 639,939 + Echvi_0565 0.47 -1.8 639,939 + Echvi_0565 0.47 -2.6 639,939 + Echvi_0565 0.47 -0.8 639,940 - Echvi_0565 0.48 -0.7 639,940 - Echvi_0565 0.48 -2.6 639,940 - Echvi_0565 0.48 +0.4 639,996 + Echvi_0565 0.51 +1.5 639,996 + Echvi_0565 0.51 +0.8 639,996 + Echvi_0565 0.51 +0.4 639,996 + Echvi_0565 0.51 +0.1 639,996 + Echvi_0565 0.51 +0.7 639,997 - Echvi_0565 0.51 -0.4 639,997 - Echvi_0565 0.51 -0.9 640,009 + Echvi_0565 0.52 +0.4 640,014 + Echvi_0565 0.53 +0.5 640,019 + Echvi_0565 0.53 +1.8 640,020 - Echvi_0565 0.53 +2.6 640,020 - Echvi_0565 0.53 -1.7 640,039 - Echvi_0565 0.54 -0.9 640,067 + Echvi_0565 0.56 +0.9 640,274 + Echvi_0565 0.70 +1.2 640,300 + Echvi_0565 0.72 +0.3 640,300 + Echvi_0565 0.72 +1.1 640,300 + Echvi_0565 0.72 +0.4 640,301 - Echvi_0565 0.72 -1.1 640,301 - Echvi_0565 0.72 +0.2 640,302 + Echvi_0565 0.72 +1.9 640,302 + Echvi_0565 0.72 +1.7 640,302 + Echvi_0565 0.72 +0.5 640,302 + Echvi_0565 0.72 +2.0 640,302 + Echvi_0565 0.72 +0.9 640,302 + Echvi_0565 0.72 +1.1 640,303 - Echvi_0565 0.72 +0.4 640,303 - Echvi_0565 0.72 -0.6 640,303 - Echvi_0565 0.72 -0.9 640,303 - Echvi_0565 0.72 -0.8 640,303 - Echvi_0565 0.72 +0.7 640,347 + Echvi_0565 0.75 +1.8 640,348 - Echvi_0565 0.75 -0.9 640,348 - Echvi_0565 0.75 -0.1 640,348 - Echvi_0565 0.75 +0.1 640,348 - Echvi_0565 0.75 +0.3 640,348 - Echvi_0565 0.75 +0.8 640,420 + Echvi_0565 0.80 +2.6 640,420 + Echvi_0565 0.80 +1.0 640,421 - Echvi_0565 0.80 +0.9 640,477 - Echvi_0565 0.84 -0.1 640,714 + +1.9 640,716 + +1.7 640,717 - -1.1 640,910 + +1.6 640,928 + +1.9 640,932 - -1.9 640,951 + +1.5 641,046 + +0.3 641,054 + -0.2 641,055 - -0.5 641,090 - +0.5 641,120 + +1.4 641,120 + -0.1 641,120 + +1.2 641,120 + +3.3 641,148 - +1.0 641,172 - -2.0 641,177 + +0.3 641,198 + -0.3 641,198 + +0.9 641,204 - +0.6 641,204 - -0.1 641,204 - -1.1 641,204 - -0.5 641,225 + +0.7 641,245 + -0.3 641,245 + +1.1 641,277 + +1.5 641,278 - -0.9 641,284 - +0.7 641,287 + +1.2 641,293 + -2.9 641,350 + +1.1 641,398 - +1.1 641,455 + -1.6 641,455 + -0.8 641,455 + +0.0 641,456 - +1.3 641,456 - -0.9 641,508 - -1.4 641,520 + +0.0 641,521 - -0.2 641,521 - -0.1 641,533 + +1.1 641,558 + -1.3 641,599 - -2.1
Or see this region's nucleotide sequence