Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_16995

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
3,953,093	-		CA264_16985	0.58	-1.6
3,953,163	+		CA264_16985	0.86	+0.4
3,953,164	-		CA264_16985	0.87	-0.5
3,953,193	+				+1.6
3,953,194	-				+0.3
3,953,236	+				+0.2
3,953,236	+				+0.2
3,953,237	-				+0.4
3,953,237	-				+0.1
3,953,237	-				-0.2
3,953,238	+				+0.2
3,953,238	+				+1.5
3,953,238	+				+0.6
3,953,264	-				-0.3
3,953,270	+				+0.9
3,953,271	-				+0.1
3,953,284	+				-0.1
3,953,284	+				-0.1
3,953,335	+		CA264_16990	0.12	-0.4
3,953,341	+		CA264_16990	0.13	-1.7
3,953,342	-		CA264_16990	0.13	+0.6
3,953,411	+		CA264_16990	0.24	-0.2
3,953,517	-		CA264_16990	0.42	+0.7
3,953,517	-		CA264_16990	0.42	-0.4
3,953,518	+		CA264_16990	0.42	-0.1
3,953,518	+		CA264_16990	0.42	-1.1
3,953,518	+		CA264_16990	0.42	+0.5
3,953,518	+		CA264_16990	0.42	-1.6
3,953,518	+		CA264_16990	0.42	-0.8
3,953,519	-		CA264_16990	0.42	-0.1
3,953,646	+		CA264_16990	0.63	-0.0
3,953,646	+		CA264_16990	0.63	+0.2
3,953,778	+		CA264_16990	0.84	+1.4
3,953,779	-		CA264_16990	0.84	-0.3
3,953,851	-				+0.0
3,953,866	-				+0.0
3,953,950	+				+1.9
3,953,950	+				+0.1
3,953,951	-				+0.1
3,953,963	+				+1.8
3,953,964	-				+0.2
3,953,964	-				+0.5
3,953,964	-				+0.3
3,953,986	-				+1.2
3,954,022	+				+0.6
3,954,024	+				-0.0
3,954,073	+				+0.1
3,954,073	+				+0.2
3,954,097	+		CA264_16995	0.11	+0.2
3,954,119	-		CA264_16995	0.14	+0.2
3,954,224	+		CA264_16995	0.30	+1.3
3,954,290	+		CA264_16995	0.40	-0.2
3,954,291	-		CA264_16995	0.40	+1.2
3,954,292	+		CA264_16995	0.40	+0.6
3,954,292	+		CA264_16995	0.40	-0.2
3,954,292	+		CA264_16995	0.40	-0.5
3,954,293	-		CA264_16995	0.40	+1.8
3,954,293	-		CA264_16995	0.40	+1.5
3,954,316	+		CA264_16995	0.43	+0.4
3,954,317	-		CA264_16995	0.43	+0.5
3,954,394	+		CA264_16995	0.55	+0.2
3,954,395	-		CA264_16995	0.55	+0.3
3,954,395	-		CA264_16995	0.55	+0.5
3,954,395	-		CA264_16995	0.55	+0.5
3,954,395	-		CA264_16995	0.55	+0.7
3,954,395	-		CA264_16995	0.55	+1.7
3,954,416	+		CA264_16995	0.58	+0.2
3,954,416	+		CA264_16995	0.58	+0.6
3,954,460	-		CA264_16995	0.64	-0.1
3,954,475	-		CA264_16995	0.67	+1.1
3,954,477	-		CA264_16995	0.67	+0.7
3,954,477	-		CA264_16995	0.67	+1.0
3,954,477	-		CA264_16995	0.67	+1.2
3,954,560	-		CA264_16995	0.79	+0.8
3,954,618	+		CA264_16995	0.88	+0.0
3,954,618	+		CA264_16995	0.88	-0.4
3,954,619	-		CA264_16995	0.88	-0.3
3,954,730	+				+0.4
3,954,730	+				+0.4
3,954,821	+				+0.3
3,954,897	-		CA264_17000	0.14	+0.9
3,954,977	-		CA264_17000	0.19	+1.9
3,954,977	-		CA264_17000	0.19	-0.3
3,954,977	-		CA264_17000	0.19	+0.6
3,955,135	+		CA264_17000	0.29	-0.2
3,955,145	+		CA264_17000	0.30	+0.5
3,955,173	+		CA264_17000	0.32	+0.1
3,955,173	+		CA264_17000	0.32	-0.1
3,955,176	-		CA264_17000	0.32	+0.4
3,955,179	+		CA264_17000	0.32	+0.5
3,955,180	-		CA264_17000	0.32	-0.8
3,955,180	-		CA264_17000	0.32	-0.7
3,955,180	-		CA264_17000	0.32	+0.4
3,955,205	+		CA264_17000	0.34	+0.1
3,955,205	+		CA264_17000	0.34	-0.4
3,955,205	+		CA264_17000	0.34	-0.6
3,955,206	-		CA264_17000	0.34	-0.1
3,955,206	-		CA264_17000	0.34	+1.1
3,955,258	-		CA264_17000	0.38	+0.3
3,955,412	-		CA264_17000	0.48	+1.0
3,955,448	-		CA264_17000	0.50	-0.2
3,955,448	-		CA264_17000	0.50	-0.2
3,955,448	-		CA264_17000	0.50	-0.0
3,955,464	-		CA264_17000	0.51	-0.8
3,955,520	+		CA264_17000	0.55	+0.6
3,955,520	+		CA264_17000	0.55	-0.2
3,955,520	+		CA264_17000	0.55	-0.1
3,955,521	-		CA264_17000	0.55	+0.0
3,955,616	+		CA264_17000	0.61	+0.9
3,955,690	-		CA264_17000	0.66	+0.4
3,955,690	-		CA264_17000	0.66	+0.4