Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14315 and CA264_14320 are separated by 175 nucleotides CA264_14320 and CA264_14325 are separated by 78 nucleotides CA264_14325 and CA264_14330 are separated by 262 nucleotides
CA264_14315: CA264_14315 - hypothetical protein, at 3,361,450 to 3,362,004
_14315
CA264_14320: CA264_14320 - tRNA-specific adenosine deaminase, at 3,362,180 to 3,362,593
_14320
CA264_14325: CA264_14325 - superoxide dismutase, at 3,362,672 to 3,363,280
_14325
CA264_14330: CA264_14330 - hypothetical protein, at 3,363,543 to 3,365,882
_14330
Position (kb)
3362
3363
3364 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3361.767 kb on + strand, within CA264_14315 at 3361.891 kb on + strand, within CA264_14315 at 3361.891 kb on + strand, within CA264_14315 at 3361.915 kb on + strand, within CA264_14315 at 3361.924 kb on - strand, within CA264_14315 at 3361.995 kb on + strand at 3361.999 kb on - strand at 3362.012 kb on + strand at 3362.012 kb on + strand at 3362.012 kb on + strand at 3362.016 kb on + strand at 3362.016 kb on + strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.020 kb on + strand at 3362.021 kb on - strand at 3362.021 kb on - strand at 3362.021 kb on - strand at 3362.024 kb on + strand at 3362.135 kb on - strand at 3362.443 kb on - strand, within CA264_14320 at 3362.486 kb on - strand, within CA264_14320 at 3362.654 kb on + strand at 3363.296 kb on + strand at 3363.303 kb on + strand at 3363.309 kb on + strand at 3363.309 kb on + strand at 3363.316 kb on + strand at 3363.340 kb on + strand at 3363.340 kb on + strand at 3363.340 kb on + strand at 3363.342 kb on + strand at 3363.388 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.420 kb on - strand at 3363.420 kb on - strand at 3363.428 kb on + strand at 3363.428 kb on + strand at 3363.429 kb on - strand at 3363.467 kb on - strand at 3363.470 kb on + strand at 3363.471 kb on - strand at 3363.503 kb on - strand at 3363.652 kb on + strand at 3363.653 kb on - strand at 3363.692 kb on + strand at 3363.693 kb on - strand at 3363.746 kb on + strand at 3363.746 kb on + strand at 3363.746 kb on + strand at 3363.746 kb on + strand at 3363.746 kb on + strand at 3363.746 kb on + strand at 3363.794 kb on + strand, within CA264_14330 at 3363.794 kb on + strand, within CA264_14330 at 3363.794 kb on + strand, within CA264_14330 at 3363.794 kb on + strand, within CA264_14330 at 3363.795 kb on - strand, within CA264_14330 at 3363.820 kb on + strand, within CA264_14330 at 3363.872 kb on + strand, within CA264_14330 at 3363.928 kb on - strand, within CA264_14330 at 3363.958 kb on + strand, within CA264_14330 at 3363.979 kb on + strand, within CA264_14330 at 3364.085 kb on + strand, within CA264_14330 at 3364.086 kb on - strand, within CA264_14330 at 3364.087 kb on + strand, within CA264_14330 at 3364.087 kb on + strand, within CA264_14330 at 3364.088 kb on - strand, within CA264_14330 at 3364.088 kb on - strand, within CA264_14330 at 3364.088 kb on - strand, within CA264_14330 at 3364.088 kb on - strand, within CA264_14330 at 3364.091 kb on + strand, within CA264_14330 at 3364.091 kb on + strand, within CA264_14330 at 3364.091 kb on + strand, within CA264_14330 at 3364.092 kb on - strand, within CA264_14330 at 3364.108 kb on - strand, within CA264_14330 at 3364.147 kb on + strand, within CA264_14330 at 3364.185 kb on + strand, within CA264_14330 at 3364.186 kb on - strand, within CA264_14330
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 3,361,767 + CA264_14315 0.57 -0.3 3,361,891 + CA264_14315 0.79 -0.3 3,361,891 + CA264_14315 0.79 -0.8 3,361,915 + CA264_14315 0.84 -0.6 3,361,924 - CA264_14315 0.85 +0.6 3,361,995 + +0.7 3,361,999 - +0.9 3,362,012 + +0.1 3,362,012 + -0.3 3,362,012 + +0.2 3,362,016 + -0.1 3,362,016 + +0.3 3,362,017 - +0.1 3,362,017 - -0.1 3,362,017 - +0.5 3,362,017 - -1.0 3,362,020 + -1.2 3,362,021 - +1.0 3,362,021 - +2.7 3,362,021 - -0.4 3,362,024 + -0.7 3,362,135 - -0.4 3,362,443 - CA264_14320 0.64 -1.7 3,362,486 - CA264_14320 0.74 -1.8 3,362,654 + +0.6 3,363,296 + -0.2 3,363,303 + -0.3 3,363,309 + +0.5 3,363,309 + -2.1 3,363,316 + +0.5 3,363,340 + -1.1 3,363,340 + -0.1 3,363,340 + -0.0 3,363,342 + -0.0 3,363,388 + +0.2 3,363,419 + -0.1 3,363,419 + -0.3 3,363,419 + -1.8 3,363,419 + +1.7 3,363,420 - +0.6 3,363,420 - -1.3 3,363,428 + -0.7 3,363,428 + +0.1 3,363,429 - -0.2 3,363,467 - -0.3 3,363,470 + +0.5 3,363,471 - -0.5 3,363,503 - -0.4 3,363,652 + -0.3 3,363,653 - -1.8 3,363,692 + +0.1 3,363,693 - +0.0 3,363,746 + -0.7 3,363,746 + +0.3 3,363,746 + -0.4 3,363,746 + +0.4 3,363,746 + +0.1 3,363,746 + -1.3 3,363,794 + CA264_14330 0.11 -0.1 3,363,794 + CA264_14330 0.11 -0.8 3,363,794 + CA264_14330 0.11 -1.6 3,363,794 + CA264_14330 0.11 -0.1 3,363,795 - CA264_14330 0.11 -0.1 3,363,820 + CA264_14330 0.12 -0.8 3,363,872 + CA264_14330 0.14 -1.1 3,363,928 - CA264_14330 0.16 +1.5 3,363,958 + CA264_14330 0.18 -0.0 3,363,979 + CA264_14330 0.19 -0.3 3,364,085 + CA264_14330 0.23 +0.3 3,364,086 - CA264_14330 0.23 +0.2 3,364,087 + CA264_14330 0.23 +0.8 3,364,087 + CA264_14330 0.23 -1.1 3,364,088 - CA264_14330 0.23 -0.2 3,364,088 - CA264_14330 0.23 +0.2 3,364,088 - CA264_14330 0.23 -0.1 3,364,088 - CA264_14330 0.23 +1.5 3,364,091 + CA264_14330 0.23 -0.4 3,364,091 + CA264_14330 0.23 -1.8 3,364,091 + CA264_14330 0.23 -0.3 3,364,092 - CA264_14330 0.23 -0.4 3,364,108 - CA264_14330 0.24 +0.1 3,364,147 + CA264_14330 0.26 -0.0 3,364,185 + CA264_14330 0.27 +0.8 3,364,186 - CA264_14330 0.27 -0.2
Or see this region's nucleotide sequence