Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12555

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
2,928,516	+		CA264_12550	0.81	+1.6
2,928,516	+		CA264_12550	0.81	+1.5
2,928,516	+		CA264_12550	0.81	+0.4
2,928,517	-		CA264_12550	0.81	+0.2
2,928,605	+		CA264_12550	0.84	-0.4
2,928,605	+		CA264_12550	0.84	+0.7
2,928,605	+		CA264_12550	0.84	-0.4
2,928,606	-		CA264_12550	0.84	-0.1
2,928,627	+		CA264_12550	0.85	+0.2
2,928,627	+		CA264_12550	0.85	+0.5
2,928,627	+		CA264_12550	0.85	-0.2
2,928,628	-		CA264_12550	0.85	-1.0
2,928,630	-		CA264_12550	0.85	+0.6
2,928,630	-		CA264_12550	0.85	+0.0
2,928,649	-		CA264_12550	0.85	+1.2
2,928,670	+		CA264_12550	0.86	-0.5
2,928,671	-		CA264_12550	0.86	+0.3
2,928,672	+		CA264_12550	0.86	+0.3
2,928,673	-		CA264_12550	0.86	+0.4
2,928,673	-		CA264_12550	0.86	-1.2
2,928,673	-		CA264_12550	0.86	+0.6
2,928,735	+		CA264_12550	0.88	-0.5
2,928,735	+		CA264_12550	0.88	+2.6
2,928,735	+		CA264_12550	0.88	-0.1
2,928,736	-		CA264_12550	0.88	-2.0
2,928,795	+				-0.0
2,928,795	+				+0.0
2,928,795	+				-0.1
2,928,795	+				+0.8
2,928,796	-				+0.3
2,928,796	-				+0.3
2,928,799	+				-0.6
2,928,800	-				-0.1
2,928,909	+				-2.2
2,928,964	-				+0.1
2,928,977	-				+0.2
2,928,977	-				-0.4
2,928,978	+				-0.6
2,928,979	-				-0.6
2,928,979	-				+0.0
2,928,990	+				-0.8
2,928,991	-				-0.0
2,928,991	-				+0.6
2,928,995	+				-0.2
2,928,996	-				-0.5
2,928,997	+				+0.8
2,929,010	+				+0.3
2,929,037	+				-0.0
2,929,038	-				-0.2
2,929,079	-				-0.4
2,929,094	-				+0.0
2,929,094	-				+0.1
2,929,095	+				-1.8
2,929,095	+				-0.4
2,929,096	-				-1.6
2,929,096	-				-1.2
2,929,107	-				-0.4
2,929,123	-				+0.6
2,929,126	+				-1.3
2,929,126	+				+0.2
2,929,127	-				+1.1
2,929,127	-				+0.0
2,929,143	-				-0.6
2,929,150	+				-0.2
2,929,182	-				+0.5
2,929,263	-				+0.4
2,929,269	+				+0.2
2,929,274	+				+0.0
2,929,321	-				+1.0
2,929,373	-				+0.6
2,929,373	-				+1.3
2,929,464	+				-0.1
2,929,465	-				-0.1
2,929,548	+				+1.4
2,929,590	+				-0.3
2,929,591	-		CA264_12555	0.10	-0.6
2,929,591	-		CA264_12555	0.10	-0.3
2,929,591	-		CA264_12555	0.10	-0.5
2,929,608	+		CA264_12555	0.11	+0.8
2,929,609	-		CA264_12555	0.11	-1.0
2,929,620	+		CA264_12555	0.12	-0.2
2,929,621	-		CA264_12555	0.12	+0.4
2,929,621	-		CA264_12555	0.12	+0.2
2,929,621	-		CA264_12555	0.12	-0.4
2,929,621	-		CA264_12555	0.12	-0.3
2,929,625	+		CA264_12555	0.13	+0.4
2,929,634	-		CA264_12555	0.13	-0.9
2,930,062	-		CA264_12555	0.47	+0.3
2,930,062	-		CA264_12555	0.47	+0.4
2,930,134	+		CA264_12555	0.52	+0.7
2,930,134	+		CA264_12555	0.52	-0.6
2,930,214	+		CA264_12555	0.59	-0.1
2,930,215	-		CA264_12555	0.59	-0.1
2,930,215	-		CA264_12555	0.59	-0.3
2,930,215	-		CA264_12555	0.59	+0.8
2,930,215	-		CA264_12555	0.59	+0.1
2,930,338	-		CA264_12555	0.68	+0.6
2,930,391	+		CA264_12555	0.72	+0.9
2,930,460	+		CA264_12555	0.78	+0.1
2,930,560	+		CA264_12555	0.86	+1.5
2,930,583	-		CA264_12555	0.87	+0.5
2,930,711	-				+0.1
2,930,719	+				+0.5
2,930,743	+				+0.2
2,930,791	-				-0.5
2,930,814	-				+0.8
2,930,841	+				+0.5
2,930,846	-				+0.7
2,930,870	-				+0.8
2,930,880	-				+0.2
2,930,881	+				+0.7
2,930,882	-				-0.7
2,931,041	-		CA264_12560	0.21	+0.5
2,931,090	-		CA264_12560	0.27	+0.5
2,931,130	-		CA264_12560	0.33	-0.1
2,931,180	-		CA264_12560	0.40	-0.4
2,931,230	-		CA264_12560	0.46	-0.1
2,931,306	+		CA264_12560	0.57	+1.3
2,931,306	+		CA264_12560	0.57	+0.3
2,931,307	-		CA264_12560	0.57	+0.3
2,931,310	+		CA264_12560	0.57	+0.6
2,931,310	+		CA264_12560	0.57	+0.6
2,931,310	+		CA264_12560	0.57	+0.7
2,931,310	+		CA264_12560	0.57	+1.4
2,931,311	-		CA264_12560	0.58	+0.2
2,931,340	+		CA264_12560	0.61	+0.8
2,931,457	+		CA264_12560	0.77	+1.7
2,931,457	+		CA264_12560	0.77	+0.6
2,931,592	+				+0.3
2,931,593	-				+1.6
2,931,593	-				+1.3
2,931,593	-				-0.1
2,931,595	-				-0.2
2,931,595	-				-0.4
2,931,595	-				+0.1
2,931,606	-				+0.7
2,931,678	-				+1.6
2,931,678	-				+1.7
2,931,692	+				+2.8
2,931,693	-				+1.7
2,931,697	-				+1.4
2,931,706	+				+2.3