Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12090

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
2,818,921	-				-0.2
2,818,954	+				+1.0
2,818,966	-				+0.2
2,819,028	+				+1.0
2,819,029	-				-0.5
2,819,037	-				+0.6
2,819,069	-				+0.7
2,819,095	+				+0.2
2,819,096	-				+0.2
2,819,125	-				+1.0
2,819,158	+				+0.8
2,819,160	+				+0.8
2,819,160	+				-0.1
2,819,160	+				-0.3
2,819,160	+				+0.8
2,819,161	-				+1.6
2,819,161	-				+0.2
2,819,224	+				+0.2
2,819,225	-				+0.4
2,819,226	+				-0.2
2,819,226	+				-0.9
2,819,534	-		CA264_12080	0.77	-1.1
2,819,607	-				+0.4
2,819,609	-				-0.2
2,819,771	+		CA264_12085	0.53	-0.3
2,819,772	-		CA264_12085	0.54	-0.4
2,819,903	+				+0.2
2,819,903	+				+0.2
2,819,903	+				-0.5
2,820,254	-		CA264_12090	0.47	+0.0
2,820,390	+		CA264_12090	0.65	+1.4
2,820,391	-		CA264_12090	0.65	+1.5
2,820,391	-		CA264_12090	0.65	-0.1
2,820,394	+		CA264_12090	0.65	-0.0
2,820,394	+		CA264_12090	0.65	+0.2
2,820,395	-		CA264_12090	0.65	-0.0
2,820,553	+		CA264_12090	0.86	+0.1
2,820,554	-		CA264_12090	0.86	+0.3
2,820,620	+				-0.9
2,820,621	-				-0.1
2,820,654	-				+1.0
2,820,673	+				+0.3
2,820,755	+				+1.0
2,820,755	+				+0.6
2,820,755	-				-0.0
2,820,756	-				-0.3
2,820,767	-				+0.6
2,820,767	-				-0.3
2,820,767	-				+1.5
2,820,767	-				+0.4
2,820,774	+				-1.1
2,820,790	+				-1.3
2,820,864	-				-1.7
2,820,864	-				+0.5
2,820,897	+				-0.6
2,821,047	+		CA264_12095	0.18	-1.4
2,821,083	-		CA264_12095	0.21	-0.6
2,821,083	-		CA264_12095	0.21	-1.2
2,821,111	+		CA264_12095	0.22	-1.0
2,821,111	+		CA264_12095	0.22	-1.8
2,821,112	-		CA264_12095	0.22	-1.9
2,821,112	-		CA264_12095	0.22	-1.1
2,821,112	-		CA264_12095	0.22	-0.2
2,821,116	+		CA264_12095	0.23	-1.2
2,821,117	-		CA264_12095	0.23	-0.2
2,821,152	-		CA264_12095	0.25	-1.1
2,821,252	+		CA264_12095	0.31	-0.8
2,821,253	-		CA264_12095	0.31	-1.7
2,821,253	-		CA264_12095	0.31	-0.0
2,821,255	-		CA264_12095	0.32	-1.4
2,821,255	-		CA264_12095	0.32	-1.0
2,821,259	+		CA264_12095	0.32	-1.9
2,821,284	+		CA264_12095	0.33	-2.6
2,821,380	+		CA264_12095	0.40	+0.1
2,821,380	+		CA264_12095	0.40	-1.2
2,821,380	+		CA264_12095	0.40	+0.2
2,821,380	+		CA264_12095	0.40	-0.7
2,821,381	-		CA264_12095	0.40	-0.9
2,821,435	+		CA264_12095	0.43	-1.4
2,821,442	+		CA264_12095	0.44	-2.1
2,821,442	+		CA264_12095	0.44	-2.1
2,821,443	-		CA264_12095	0.44	-1.0
2,821,443	-		CA264_12095	0.44	-0.5
2,821,443	-		CA264_12095	0.44	-3.0
2,821,443	-		CA264_12095	0.44	-0.2
2,821,446	+		CA264_12095	0.44	-1.0
2,821,447	-		CA264_12095	0.44	-1.5
2,821,476	+		CA264_12095	0.46	-1.9
2,821,476	+		CA264_12095	0.46	-1.9
2,821,488	+		CA264_12095	0.46	-1.2
2,821,488	+		CA264_12095	0.46	-1.0
2,821,488	+		CA264_12095	0.46	-0.9
2,821,492	+		CA264_12095	0.47	-1.7