Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08580

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
1,991,478	+				+0.5
1,991,479	-				+0.1
1,991,546	-				-0.4
1,991,548	-				+0.4
1,991,559	+				+0.9
1,991,601	-				+0.4
1,991,631	+				+0.5
1,991,637	-				-0.8
1,991,642	-				+0.1
1,991,680	+				-0.2
1,991,681	-				-0.5
1,991,695	-				+0.6
1,991,743	+		CA264_08575	0.13	+0.7
1,991,744	-		CA264_08575	0.14	-0.1
1,991,744	-		CA264_08575	0.14	-1.0
1,991,881	+		CA264_08575	0.32	-0.5
1,991,882	-		CA264_08575	0.32	-0.6
1,991,890	+		CA264_08575	0.33	+0.3
1,991,890	+		CA264_08575	0.33	-0.3
1,991,890	+		CA264_08575	0.33	-0.7
1,991,890	+		CA264_08575	0.33	+0.3
1,991,894	+		CA264_08575	0.33	+1.1
1,991,894	+		CA264_08575	0.33	+0.5
1,991,894	+		CA264_08575	0.33	-0.5
1,991,894	+		CA264_08575	0.33	-0.4
1,991,895	-		CA264_08575	0.33	-0.2
1,991,895	-		CA264_08575	0.33	-1.5
1,991,895	-		CA264_08575	0.33	-0.6
1,991,895	-		CA264_08575	0.33	+1.2
1,991,896	+		CA264_08575	0.33	+0.2
1,991,956	+		CA264_08575	0.41	-0.2
1,992,224	-		CA264_08575	0.76	+0.6
1,992,229	-		CA264_08575	0.77	+0.4
1,992,281	-		CA264_08575	0.84	-1.3
1,992,333	+				-0.2
1,992,364	-				+0.1
1,992,364	-				-0.3
1,992,537	+				-1.0
1,992,590	+				-1.6
1,992,700	-		CA264_08580	0.16	+0.6
1,992,799	+		CA264_08580	0.23	+1.1
1,992,867	-		CA264_08580	0.27	+0.0
1,992,873	+		CA264_08580	0.28	+0.2
1,992,873	+		CA264_08580	0.28	+0.0
1,992,873	+		CA264_08580	0.28	+0.0
1,992,924	+		CA264_08580	0.31	-0.1
1,992,924	+		CA264_08580	0.31	-0.4
1,992,925	-		CA264_08580	0.31	+0.2
1,992,925	-		CA264_08580	0.31	-0.4
1,992,996	-		CA264_08580	0.36	-0.2
1,993,160	+		CA264_08580	0.47	+0.8
1,993,176	+		CA264_08580	0.48	-0.4
1,993,176	+		CA264_08580	0.48	-1.0
1,993,177	-		CA264_08580	0.48	-1.7
1,993,225	+		CA264_08580	0.52	-0.2
1,993,258	-		CA264_08580	0.54	+1.4
1,993,429	-		CA264_08580	0.66	+0.0
1,993,445	-		CA264_08580	0.67	+0.6
1,993,481	-		CA264_08580	0.69	+0.4
1,993,481	-		CA264_08580	0.69	+0.2
1,993,537	+		CA264_08580	0.73	+1.4
1,993,593	+		CA264_08580	0.77	-0.0
1,993,593	+		CA264_08580	0.77	+1.1
1,993,594	-		CA264_08580	0.77	-1.1
1,993,594	-		CA264_08580	0.77	+0.3
1,993,594	-		CA264_08580	0.77	-1.0
1,993,667	+		CA264_08580	0.82	-0.3
1,993,868	+				-0.9
1,993,868	+				-1.3
1,993,868	+				-0.1
1,993,886	+				-0.4
1,993,887	-				-0.2
1,993,899	-				+0.8
1,993,899	-				-0.0
1,993,918	+				-2.8
1,993,919	-				-0.4
1,993,927	+				+0.7
1,993,927	+				-0.4
1,993,948	-				+0.4
1,993,948	-				+0.8
1,993,950	+				+1.2
1,993,975	-				+1.1
1,993,994	-				+0.8
1,994,020	+		CA264_08585	0.23	+0.2
1,994,037	+		CA264_08585	0.32	-0.3
1,994,038	-		CA264_08585	0.33	+0.7
1,994,038	-		CA264_08585	0.33	-0.1
1,994,069	+		CA264_08585	0.50	+0.3
1,994,072	+		CA264_08585	0.51	+0.2
1,994,125	-		CA264_08585	0.80	-0.5
1,994,125	-		CA264_08585	0.80	+0.2
1,994,131	+		CA264_08585	0.84	+0.1
1,994,132	-		CA264_08585	0.84	+0.8
1,994,134	-		CA264_08585	0.85	+0.3
1,994,134	-		CA264_08585	0.85	-0.8
1,994,134	-		CA264_08585	0.85	+0.4
1,994,134	-		CA264_08585	0.85	+1.5
1,994,172	-				+1.4
1,994,223	-				-0.4
1,994,357	+				-0.1
1,994,358	-				+1.1
1,994,358	-				+0.4
1,994,410	+		CA264_08590	0.18	+3.4
1,994,411	-		CA264_08590	0.18	+0.5
1,994,411	-		CA264_08590	0.18	+0.5
1,994,546	+		CA264_08590	0.53	-0.3
1,994,629	-		CA264_08590	0.74	+0.3
1,994,691	+		CA264_08590	0.90	+1.0
1,994,695	+				-0.3
1,994,695	+				+0.2
1,994,716	+				-0.2
1,994,753	+				+0.6
1,994,759	-				+2.1
1,994,908	-				+0.0
1,994,908	-				+0.9
1,994,916	+				-0.2
1,994,916	+				-0.0
1,994,916	+				-0.2
1,994,917	-				+0.9
1,994,921	+				+0.5