Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07090

Experiment: m.b. Doxycycline hyclate 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.008 mg/ml
1,631,688	-				+0.2
1,631,724	-				+0.4
1,631,726	+				-1.1
1,631,727	-				-0.3
1,631,733	+				-1.5
1,631,749	+				+1.1
1,631,749	+				+2.4
1,631,750	-				+0.2
1,631,750	-				-0.4
1,631,750	-				+0.3
1,631,751	+				-0.6
1,631,751	+				+0.0
1,631,792	+				-0.3
1,631,813	-				-0.9
1,631,836	-				-0.1
1,631,838	-				+0.3
1,631,838	-				-0.8
1,631,856	+				-0.6
1,631,857	-				-0.1
1,631,870	+				-0.2
1,631,870	+				-0.0
1,631,871	-				+0.2
1,631,871	-				+0.5
1,631,871	-				-0.2
1,631,871	-				+1.2
1,631,873	-				-0.0
1,631,873	-				+0.0
1,631,890	+				+0.2
1,631,890	+				-0.4
1,631,890	+				-0.1
1,631,890	+				+0.1
1,631,891	-				+1.0
1,631,892	+				-1.3
1,631,893	-				+0.0
1,631,930	-				-0.0
1,631,961	+				-0.3
1,631,961	+				-0.0
1,631,962	-				+0.3
1,632,117	+		CA264_07085	0.42	-1.2
1,632,118	-		CA264_07085	0.43	+0.1
1,632,141	+		CA264_07085	0.47	-0.2
1,632,199	+		CA264_07085	0.60	-0.1
1,632,332	+		CA264_07085	0.88	-0.6
1,632,333	-		CA264_07085	0.88	-0.4
1,632,348	-				-0.5
1,632,348	-				-1.5
1,632,353	+				-0.8
1,632,354	-				-0.2
1,632,369	+				+0.2
1,632,378	-				+1.3
1,632,413	+				-0.9
1,632,419	+				-1.5
1,632,453	-				-0.8
1,632,455	+				-0.0
1,632,455	+				+0.4
1,632,456	-				+0.8
1,632,516	+				-0.4
1,632,516	-				+0.3
1,632,566	+				-0.1
1,632,589	+				-0.2
1,632,590	-				-0.1
1,632,590	-				-0.8
1,632,644	+				-0.7
1,632,771	-				-0.3
1,632,815	-				-0.7
1,632,826	+				+0.1
1,632,852	+		CA264_07090	0.12	-1.4
1,632,860	+		CA264_07090	0.12	-0.8
1,632,868	-		CA264_07090	0.13	-0.3
1,632,919	-		CA264_07090	0.16	-0.1
1,633,031	-		CA264_07090	0.23	+0.0
1,633,040	+		CA264_07090	0.24	-0.2
1,633,040	+		CA264_07090	0.24	-1.0
1,633,040	+		CA264_07090	0.24	+0.3
1,633,040	+		CA264_07090	0.24	-0.3
1,633,041	-		CA264_07090	0.24	+0.4
1,633,041	-		CA264_07090	0.24	-0.4
1,633,046	+		CA264_07090	0.24	-0.9
1,633,047	-		CA264_07090	0.25	-0.1
1,633,047	-		CA264_07090	0.25	-0.5
1,633,068	+		CA264_07090	0.26	-0.3
1,633,069	-		CA264_07090	0.26	-1.2
1,633,072	+		CA264_07090	0.26	+1.1
1,633,073	-		CA264_07090	0.26	-0.2
1,633,136	+		CA264_07090	0.30	-0.2
1,633,175	+		CA264_07090	0.33	+0.5
1,633,182	+		CA264_07090	0.33	+1.4
1,633,207	+		CA264_07090	0.35	-0.0
1,633,211	-		CA264_07090	0.35	+0.6
1,633,288	+		CA264_07090	0.40	+0.2
1,633,289	-		CA264_07090	0.41	-0.5
1,633,312	-		CA264_07090	0.42	-0.4
1,633,321	+		CA264_07090	0.43	-0.0
1,633,322	-		CA264_07090	0.43	+0.2
1,633,390	-		CA264_07090	0.47	-0.4
1,633,459	+		CA264_07090	0.52	-0.1
1,633,459	+		CA264_07090	0.52	+0.0
1,633,460	-		CA264_07090	0.52	-0.3
1,633,461	+		CA264_07090	0.52	-1.0
1,633,462	-		CA264_07090	0.52	-0.4
1,633,562	-		CA264_07090	0.59	-0.1
1,633,577	+		CA264_07090	0.60	+0.7
1,633,625	+		CA264_07090	0.63	+0.0
1,633,626	-		CA264_07090	0.63	-0.5
1,633,626	-		CA264_07090	0.63	-1.0
1,633,637	+		CA264_07090	0.63	-0.3
1,633,639	+		CA264_07090	0.64	-0.7
1,633,640	-		CA264_07090	0.64	-0.0
1,633,708	+		CA264_07090	0.68	-0.5
1,633,732	+		CA264_07090	0.70	-1.7
1,633,753	+		CA264_07090	0.71	+0.5
1,633,753	+		CA264_07090	0.71	-0.6
1,633,753	+		CA264_07090	0.71	-2.0
1,633,754	-		CA264_07090	0.71	-1.6
1,633,763	+		CA264_07090	0.72	-0.4
1,633,763	+		CA264_07090	0.72	-0.1
1,633,795	+		CA264_07090	0.74	-1.7
1,633,795	+		CA264_07090	0.74	-0.4
1,633,796	-		CA264_07090	0.74	+0.2
1,633,796	-		CA264_07090	0.74	-0.6
1,633,817	+		CA264_07090	0.75	-1.1
1,633,817	+		CA264_07090	0.75	-0.6
1,633,818	-		CA264_07090	0.75	-0.4
1,633,856	+		CA264_07090	0.78	-0.1
1,633,857	-		CA264_07090	0.78	-0.8
1,633,857	-		CA264_07090	0.78	+0.6
1,633,882	+		CA264_07090	0.80	+0.2
1,633,883	-		CA264_07090	0.80	-0.5
1,633,945	+		CA264_07090	0.84	-0.5
1,633,945	+		CA264_07090	0.84	-0.5
1,633,946	-		CA264_07090	0.84	+1.8
1,634,086	+				-0.1
1,634,098	-				+0.1
1,634,098	-				-0.8
1,634,154	-				+0.6
1,634,171	-				-0.4
1,634,198	+				-1.4
1,634,204	-				+1.4
1,634,206	-				+0.1
1,634,212	+				+1.1
1,634,213	-				-0.4
1,634,213	-				+1.2
1,634,214	+				-0.2
1,634,224	-				+0.1
1,634,314	+				-0.2
1,634,328	-				+0.0
1,634,328	-				-0.3
1,634,328	-				+0.2
1,634,368	+				-0.1
1,634,369	-				+0.0
1,634,416	+		CA264_07095	0.12	+0.1
1,634,416	+		CA264_07095	0.12	-0.3
1,634,493	+		CA264_07095	0.19	-0.2
1,634,493	+		CA264_07095	0.19	-0.5
1,634,494	-		CA264_07095	0.19	-0.1
1,634,494	-		CA264_07095	0.19	-0.6
1,634,494	-		CA264_07095	0.19	-0.9
1,634,521	+		CA264_07095	0.21	-1.0
1,634,522	-		CA264_07095	0.21	+0.6
1,634,664	-		CA264_07095	0.32	-0.7
1,634,707	+		CA264_07095	0.35	-0.7
1,634,707	+		CA264_07095	0.35	+0.0
1,634,707	+		CA264_07095	0.35	+0.8
1,634,708	-		CA264_07095	0.36	-0.2
1,634,787	+		CA264_07095	0.42	+0.1
1,634,830	+		CA264_07095	0.45	-0.2
1,634,831	-		CA264_07095	0.45	-0.3
1,634,831	-		CA264_07095	0.45	-0.7
1,634,865	-		CA264_07095	0.48	-1.2
1,635,023	+		CA264_07095	0.60	-0.1
1,635,023	+		CA264_07095	0.60	-0.4
1,635,056	+		CA264_07095	0.63	-0.3
1,635,057	-		CA264_07095	0.63	-0.2