Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06240 and CA264_06245 overlap by 1 nucleotides CA264_06245 and CA264_06250 are separated by 87 nucleotides
CA264_06240: CA264_06240 - acetylornithine carbamoyltransferase, at 1,451,947 to 1,452,897
_06240
CA264_06245: CA264_06245 - aspartate aminotransferase family protein, at 1,452,897 to 1,454,051
_06245
CA264_06250: CA264_06250 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,454,139 to 1,455,143
_06250
Position (kb)
1452
1453
1454
1455 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1451.914 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.920 kb on + strand at 1451.927 kb on - strand at 1451.927 kb on - strand at 1451.933 kb on + strand at 1452.014 kb on - strand at 1452.038 kb on - strand at 1452.107 kb on - strand, within CA264_06240 at 1452.194 kb on + strand, within CA264_06240 at 1452.276 kb on - strand, within CA264_06240 at 1452.291 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.429 kb on + strand, within CA264_06240 at 1452.506 kb on - strand, within CA264_06240 at 1452.507 kb on + strand, within CA264_06240 at 1452.532 kb on - strand, within CA264_06240 at 1452.621 kb on + strand, within CA264_06240 at 1452.772 kb on + strand, within CA264_06240 at 1452.772 kb on + strand, within CA264_06240 at 1452.809 kb on + strand at 1452.809 kb on + strand at 1452.815 kb on + strand at 1452.888 kb on - strand at 1453.037 kb on - strand, within CA264_06245 at 1453.037 kb on - strand, within CA264_06245 at 1453.123 kb on - strand, within CA264_06245 at 1453.123 kb on - strand, within CA264_06245 at 1453.164 kb on + strand, within CA264_06245 at 1453.164 kb on + strand, within CA264_06245 at 1453.165 kb on - strand, within CA264_06245 at 1453.241 kb on - strand, within CA264_06245 at 1453.284 kb on + strand, within CA264_06245 at 1453.416 kb on + strand, within CA264_06245 at 1453.590 kb on - strand, within CA264_06245 at 1453.881 kb on + strand, within CA264_06245 at 1453.882 kb on - strand, within CA264_06245 at 1453.951 kb on + strand at 1453.964 kb on - strand at 1454.019 kb on - strand at 1454.054 kb on + strand at 1454.064 kb on - strand at 1454.066 kb on - strand at 1454.066 kb on - strand at 1454.421 kb on - strand, within CA264_06250 at 1454.422 kb on + strand, within CA264_06250 at 1454.552 kb on + strand, within CA264_06250 at 1454.552 kb on + strand, within CA264_06250 at 1454.554 kb on + strand, within CA264_06250 at 1454.555 kb on - strand, within CA264_06250 at 1454.641 kb on - strand, within CA264_06250
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 1,451,914 + -0.2 1,451,920 + -1.6 1,451,920 + -0.3 1,451,920 + -1.8 1,451,920 + +0.1 1,451,927 - +0.8 1,451,927 - -0.4 1,451,933 + -0.2 1,452,014 - -0.4 1,452,038 - -0.2 1,452,107 - CA264_06240 0.17 -0.5 1,452,194 + CA264_06240 0.26 -0.5 1,452,276 - CA264_06240 0.35 +0.6 1,452,291 + CA264_06240 0.36 +0.1 1,452,429 + CA264_06240 0.51 +1.0 1,452,429 + CA264_06240 0.51 -1.5 1,452,429 + CA264_06240 0.51 +0.5 1,452,506 - CA264_06240 0.59 +1.0 1,452,507 + CA264_06240 0.59 +2.0 1,452,532 - CA264_06240 0.62 -0.1 1,452,621 + CA264_06240 0.71 +0.9 1,452,772 + CA264_06240 0.87 -0.1 1,452,772 + CA264_06240 0.87 -1.1 1,452,809 + -0.1 1,452,809 + -0.5 1,452,815 + -0.1 1,452,888 - +1.7 1,453,037 - CA264_06245 0.12 +0.2 1,453,037 - CA264_06245 0.12 +0.0 1,453,123 - CA264_06245 0.20 -0.1 1,453,123 - CA264_06245 0.20 -0.4 1,453,164 + CA264_06245 0.23 +0.2 1,453,164 + CA264_06245 0.23 +0.8 1,453,165 - CA264_06245 0.23 -0.4 1,453,241 - CA264_06245 0.30 +0.2 1,453,284 + CA264_06245 0.34 -0.1 1,453,416 + CA264_06245 0.45 -0.5 1,453,590 - CA264_06245 0.60 +2.1 1,453,881 + CA264_06245 0.85 -0.8 1,453,882 - CA264_06245 0.85 -1.0 1,453,951 + -0.8 1,453,964 - +0.1 1,454,019 - -0.0 1,454,054 + -0.4 1,454,064 - +0.4 1,454,066 - -1.0 1,454,066 - -0.9 1,454,421 - CA264_06250 0.28 -0.9 1,454,422 + CA264_06250 0.28 -0.7 1,454,552 + CA264_06250 0.41 -1.0 1,454,552 + CA264_06250 0.41 -0.0 1,454,554 + CA264_06250 0.41 +0.0 1,454,555 - CA264_06250 0.41 -0.4 1,454,641 - CA264_06250 0.50 -0.2
Or see this region's nucleotide sequence