Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02525 and CA264_02530 are separated by 111 nucleotides CA264_02530 and CA264_02535 are separated by 147 nucleotides CA264_02535 and CA264_02540 are separated by 337 nucleotides
CA264_02525: CA264_02525 - siroheme synthase, at 589,902 to 591,431
_02525
CA264_02530: CA264_02530 - O-succinylhomoserine sulfhydrylase, at 591,543 to 592,706
_02530
CA264_02535: CA264_02535 - disulfide bond formation regulator, at 592,854 to 593,270
_02535
CA264_02540: CA264_02540 - sulfate adenylyltransferase, at 593,608 to 594,864
_02540
Position (kb) 591
592
593 Strain fitness (log2 ratio) -2
-1
0
1
2 at 590.655 kb on - strand, within CA264_02525 at 590.672 kb on - strand, within CA264_02525 at 590.684 kb on - strand, within CA264_02525 at 590.732 kb on + strand, within CA264_02525 at 590.824 kb on + strand, within CA264_02525 at 590.888 kb on - strand, within CA264_02525 at 590.895 kb on - strand, within CA264_02525 at 590.895 kb on - strand, within CA264_02525 at 590.950 kb on - strand, within CA264_02525 at 591.020 kb on - strand, within CA264_02525 at 591.209 kb on - strand, within CA264_02525 at 591.374 kb on - strand at 591.400 kb on + strand at 591.519 kb on + strand at 591.536 kb on + strand at 591.543 kb on - strand at 591.591 kb on + strand at 591.608 kb on - strand at 591.608 kb on - strand at 591.613 kb on + strand at 591.615 kb on + strand at 591.615 kb on + strand at 591.615 kb on + strand at 591.616 kb on - strand at 591.616 kb on - strand at 591.619 kb on + strand at 591.694 kb on - strand, within CA264_02530 at 591.718 kb on + strand, within CA264_02530 at 591.809 kb on - strand, within CA264_02530 at 591.809 kb on - strand, within CA264_02530 at 591.913 kb on - strand, within CA264_02530 at 591.913 kb on - strand, within CA264_02530 at 591.914 kb on + strand, within CA264_02530 at 591.914 kb on + strand, within CA264_02530 at 591.915 kb on - strand, within CA264_02530 at 591.915 kb on - strand, within CA264_02530 at 591.919 kb on - strand, within CA264_02530 at 591.977 kb on + strand, within CA264_02530 at 591.977 kb on + strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.978 kb on - strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.979 kb on + strand, within CA264_02530 at 591.980 kb on - strand, within CA264_02530 at 591.984 kb on - strand, within CA264_02530 at 591.998 kb on + strand, within CA264_02530 at 592.015 kb on + strand, within CA264_02530 at 592.056 kb on - strand, within CA264_02530 at 592.067 kb on + strand at 592.067 kb on + strand, within CA264_02530 at 592.068 kb on - strand, within CA264_02530 at 592.069 kb on + strand, within CA264_02530 at 592.077 kb on - strand, within CA264_02530 at 592.077 kb on - strand, within CA264_02530 at 592.152 kb on + strand, within CA264_02530 at 592.152 kb on + strand, within CA264_02530 at 592.154 kb on + strand, within CA264_02530 at 592.155 kb on - strand, within CA264_02530 at 592.192 kb on + strand, within CA264_02530 at 592.192 kb on + strand, within CA264_02530 at 592.193 kb on - strand, within CA264_02530 at 592.196 kb on + strand, within CA264_02530 at 592.280 kb on + strand, within CA264_02530 at 592.383 kb on + strand, within CA264_02530 at 592.454 kb on - strand, within CA264_02530 at 592.522 kb on + strand, within CA264_02530 at 592.523 kb on - strand, within CA264_02530 at 592.523 kb on - strand, within CA264_02530 at 592.616 kb on + strand at 592.617 kb on - strand at 592.633 kb on + strand at 592.634 kb on - strand at 592.640 kb on - strand at 592.640 kb on - strand at 592.660 kb on + strand at 592.668 kb on - strand at 592.682 kb on + strand at 592.704 kb on + strand at 592.704 kb on + strand at 592.738 kb on - strand at 592.740 kb on + strand at 592.742 kb on + strand at 592.764 kb on + strand at 592.789 kb on - strand at 592.789 kb on - strand at 592.790 kb on + strand at 592.790 kb on + strand at 592.791 kb on - strand at 592.794 kb on + strand at 592.796 kb on + strand at 592.803 kb on - strand at 592.808 kb on + strand at 592.809 kb on - strand at 592.825 kb on + strand at 592.838 kb on + strand at 592.841 kb on + strand at 592.841 kb on + strand at 592.841 kb on + strand at 592.841 kb on + strand at 592.841 kb on + strand at 592.842 kb on - strand at 592.848 kb on + strand at 592.876 kb on + strand at 592.876 kb on + strand at 592.925 kb on - strand, within CA264_02535 at 592.931 kb on - strand, within CA264_02535 at 592.931 kb on - strand, within CA264_02535 at 593.056 kb on + strand, within CA264_02535 at 593.057 kb on - strand, within CA264_02535 at 593.131 kb on + strand, within CA264_02535 at 593.166 kb on - strand, within CA264_02535 at 593.188 kb on + strand, within CA264_02535 at 593.188 kb on + strand, within CA264_02535 at 593.203 kb on - strand, within CA264_02535 at 593.203 kb on - strand, within CA264_02535 at 593.221 kb on + strand, within CA264_02535 at 593.227 kb on - strand, within CA264_02535 at 593.240 kb on + strand at 593.241 kb on - strand at 593.241 kb on - strand at 593.268 kb on + strand at 593.300 kb on + strand at 593.301 kb on - strand at 593.323 kb on + strand at 593.323 kb on + strand at 593.324 kb on - strand at 593.354 kb on - strand at 593.368 kb on + strand at 593.375 kb on + strand at 593.503 kb on + strand at 593.510 kb on + strand at 593.641 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 590,655 - CA264_02525 0.49 -1.3 590,672 - CA264_02525 0.50 -0.6 590,684 - CA264_02525 0.51 +0.8 590,732 + CA264_02525 0.54 +0.4 590,824 + CA264_02525 0.60 -1.6 590,888 - CA264_02525 0.64 -1.4 590,895 - CA264_02525 0.65 -1.4 590,895 - CA264_02525 0.65 +1.5 590,950 - CA264_02525 0.68 +0.5 591,020 - CA264_02525 0.73 +0.6 591,209 - CA264_02525 0.85 -2.6 591,374 - -1.0 591,400 + -2.1 591,519 + -1.1 591,536 + +0.7 591,543 - -1.4 591,591 + +0.4 591,608 - -0.5 591,608 - +0.5 591,613 + +0.9 591,615 + -0.0 591,615 + -0.2 591,615 + +0.8 591,616 - -0.3 591,616 - -1.8 591,619 + -0.9 591,694 - CA264_02530 0.13 +0.5 591,718 + CA264_02530 0.15 -1.1 591,809 - CA264_02530 0.23 -0.6 591,809 - CA264_02530 0.23 -1.3 591,913 - CA264_02530 0.32 -0.9 591,913 - CA264_02530 0.32 -0.7 591,914 + CA264_02530 0.32 +0.2 591,914 + CA264_02530 0.32 +1.2 591,915 - CA264_02530 0.32 -0.1 591,915 - CA264_02530 0.32 -1.1 591,919 - CA264_02530 0.32 -0.6 591,977 + CA264_02530 0.37 -0.5 591,977 + CA264_02530 0.37 +0.0 591,978 - CA264_02530 0.37 +0.2 591,978 - CA264_02530 0.37 -0.8 591,978 - CA264_02530 0.37 -0.6 591,978 - CA264_02530 0.37 -2.3 591,979 + CA264_02530 0.37 -0.9 591,979 + CA264_02530 0.37 -1.0 591,979 + CA264_02530 0.37 -0.7 591,980 - CA264_02530 0.38 -0.6 591,984 - CA264_02530 0.38 -0.8 591,998 + CA264_02530 0.39 +0.0 592,015 + CA264_02530 0.41 +0.1 592,056 - CA264_02530 0.44 -0.3 592,067 + +0.2 592,067 + CA264_02530 0.45 -0.5 592,068 - CA264_02530 0.45 -0.8 592,069 + CA264_02530 0.45 +1.3 592,077 - CA264_02530 0.46 -0.7 592,077 - CA264_02530 0.46 -0.7 592,152 + CA264_02530 0.52 -0.2 592,152 + CA264_02530 0.52 -0.7 592,154 + CA264_02530 0.52 -1.9 592,155 - CA264_02530 0.53 -0.7 592,192 + CA264_02530 0.56 -1.6 592,192 + CA264_02530 0.56 +0.2 592,193 - CA264_02530 0.56 -0.2 592,196 + CA264_02530 0.56 -0.9 592,280 + CA264_02530 0.63 -1.0 592,383 + CA264_02530 0.72 +0.0 592,454 - CA264_02530 0.78 -0.3 592,522 + CA264_02530 0.84 -1.6 592,523 - CA264_02530 0.84 -1.3 592,523 - CA264_02530 0.84 -1.3 592,616 + -0.2 592,617 - -1.4 592,633 + +0.8 592,634 - -0.7 592,640 - -0.1 592,640 - +0.5 592,660 + +0.5 592,668 - -0.3 592,682 + -1.2 592,704 + +0.4 592,704 + -0.2 592,738 - -0.6 592,740 + -1.4 592,742 + +0.6 592,764 + +0.0 592,789 - -0.4 592,789 - -0.9 592,790 + -0.7 592,790 + +0.1 592,791 - -0.8 592,794 + -0.4 592,796 + -1.5 592,803 - +0.4 592,808 + +0.0 592,809 - +0.9 592,825 + -0.1 592,838 + -0.3 592,841 + -0.6 592,841 + +0.3 592,841 + -0.1 592,841 + -0.2 592,841 + +0.1 592,842 - -0.9 592,848 + +0.6 592,876 + -0.3 592,876 + +1.2 592,925 - CA264_02535 0.17 -0.9 592,931 - CA264_02535 0.18 -0.9 592,931 - CA264_02535 0.18 -0.9 593,056 + CA264_02535 0.48 -0.1 593,057 - CA264_02535 0.49 +0.5 593,131 + CA264_02535 0.66 +2.5 593,166 - CA264_02535 0.75 -1.4 593,188 + CA264_02535 0.80 +1.1 593,188 + CA264_02535 0.80 -1.0 593,203 - CA264_02535 0.84 -1.1 593,203 - CA264_02535 0.84 -0.9 593,221 + CA264_02535 0.88 +0.2 593,227 - CA264_02535 0.89 -0.0 593,240 + -0.2 593,241 - +0.6 593,241 - -0.5 593,268 + +1.5 593,300 + -0.2 593,301 - -1.7 593,323 + +2.5 593,323 + -0.2 593,324 - -0.6 593,354 - -0.6 593,368 + -1.4 593,375 + +0.4 593,503 + -0.4 593,510 + -0.1 593,641 + -0.9
Or see this region's nucleotide sequence