Experiment: m.b. Doxycycline hyclate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01940 and CA264_01945 are separated by 146 nucleotides CA264_01945 and CA264_01950 are separated by 97 nucleotides
CA264_01940: CA264_01940 - antibiotic biosynthesis monooxygenase, at 450,511 to 450,801
_01940
CA264_01945: CA264_01945 - hypothetical protein, at 450,948 to 451,724
_01945
CA264_01950: CA264_01950 - PhoH family protein, at 451,822 to 452,859
_01950
Position (kb) 450
451
452 Strain fitness (log2 ratio) -1
0
1
2 at 450.057 kb on - strand at 450.074 kb on + strand at 450.081 kb on - strand at 450.081 kb on - strand at 450.081 kb on - strand at 450.084 kb on + strand at 450.111 kb on + strand at 450.112 kb on - strand at 450.112 kb on - strand at 450.151 kb on + strand at 450.152 kb on - strand at 450.185 kb on + strand at 450.185 kb on + strand at 450.330 kb on - strand at 450.350 kb on + strand at 450.351 kb on - strand at 450.389 kb on - strand at 450.391 kb on - strand at 450.439 kb on + strand at 450.512 kb on + strand at 450.580 kb on + strand, within CA264_01940 at 450.581 kb on - strand, within CA264_01940 at 450.644 kb on + strand, within CA264_01940 at 450.654 kb on - strand, within CA264_01940 at 450.771 kb on + strand, within CA264_01940 at 450.802 kb on - strand at 450.810 kb on + strand at 450.811 kb on - strand at 450.867 kb on + strand at 450.868 kb on - strand at 450.900 kb on + strand at 450.901 kb on - strand at 450.910 kb on + strand at 450.911 kb on - strand at 451.057 kb on + strand, within CA264_01945 at 451.402 kb on - strand, within CA264_01945 at 451.421 kb on - strand, within CA264_01945 at 451.462 kb on + strand, within CA264_01945 at 451.490 kb on - strand, within CA264_01945 at 451.502 kb on + strand, within CA264_01945 at 451.577 kb on - strand, within CA264_01945 at 451.597 kb on + strand, within CA264_01945 at 451.689 kb on - strand at 451.717 kb on - strand at 451.717 kb on - strand at 451.728 kb on - strand at 451.735 kb on - strand at 451.800 kb on + strand at 451.807 kb on + strand at 451.851 kb on + strand at 451.851 kb on + strand at 451.851 kb on + strand at 451.851 kb on + strand at 451.854 kb on - strand at 451.929 kb on + strand, within CA264_01950 at 451.929 kb on + strand, within CA264_01950 at 451.929 kb on + strand, within CA264_01950 at 451.929 kb on + strand, within CA264_01950 at 451.942 kb on - strand, within CA264_01950 at 452.022 kb on + strand, within CA264_01950 at 452.023 kb on - strand, within CA264_01950 at 452.037 kb on + strand, within CA264_01950 at 452.043 kb on + strand, within CA264_01950 at 452.044 kb on - strand, within CA264_01950 at 452.051 kb on + strand, within CA264_01950 at 452.051 kb on + strand, within CA264_01950 at 452.055 kb on + strand, within CA264_01950 at 452.055 kb on + strand, within CA264_01950 at 452.056 kb on - strand, within CA264_01950 at 452.060 kb on - strand, within CA264_01950 at 452.142 kb on + strand, within CA264_01950 at 452.300 kb on + strand, within CA264_01950 at 452.390 kb on - strand, within CA264_01950 at 452.431 kb on + strand, within CA264_01950 at 452.435 kb on - strand, within CA264_01950 at 452.473 kb on + strand, within CA264_01950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.008 mg/ml remove 450,057 - +0.4 450,074 + -1.2 450,081 - +0.3 450,081 - -0.8 450,081 - -1.0 450,084 + +1.0 450,111 + -0.1 450,112 - -1.3 450,112 - -0.1 450,151 + +0.4 450,152 - -0.8 450,185 + +0.4 450,185 + +0.4 450,330 - -0.1 450,350 + -0.6 450,351 - +0.3 450,389 - -1.0 450,391 - -0.1 450,439 + -0.3 450,512 + -0.0 450,580 + CA264_01940 0.24 -0.5 450,581 - CA264_01940 0.24 +1.2 450,644 + CA264_01940 0.46 +0.2 450,654 - CA264_01940 0.49 -0.6 450,771 + CA264_01940 0.89 -0.1 450,802 - -0.5 450,810 + +0.8 450,811 - +0.2 450,867 + +0.2 450,868 - +0.8 450,900 + +0.6 450,901 - +0.4 450,910 + -0.5 450,911 - -0.2 451,057 + CA264_01945 0.14 +0.4 451,402 - CA264_01945 0.58 +0.3 451,421 - CA264_01945 0.61 +0.2 451,462 + CA264_01945 0.66 +0.3 451,490 - CA264_01945 0.70 -0.3 451,502 + CA264_01945 0.71 +0.5 451,577 - CA264_01945 0.81 +1.4 451,597 + CA264_01945 0.84 -0.7 451,689 - +0.4 451,717 - -0.5 451,717 - +1.0 451,728 - +0.1 451,735 - -0.2 451,800 + -0.9 451,807 + -0.2 451,851 + -0.3 451,851 + -0.9 451,851 + -0.5 451,851 + -0.7 451,854 - -1.7 451,929 + CA264_01950 0.10 -0.6 451,929 + CA264_01950 0.10 +0.0 451,929 + CA264_01950 0.10 -0.8 451,929 + CA264_01950 0.10 -0.5 451,942 - CA264_01950 0.12 -0.3 452,022 + CA264_01950 0.19 +0.2 452,023 - CA264_01950 0.19 +0.7 452,037 + CA264_01950 0.21 -1.0 452,043 + CA264_01950 0.21 -0.4 452,044 - CA264_01950 0.21 -0.5 452,051 + CA264_01950 0.22 -0.4 452,051 + CA264_01950 0.22 -0.6 452,055 + CA264_01950 0.22 -1.0 452,055 + CA264_01950 0.22 -0.0 452,056 - CA264_01950 0.23 +0.8 452,060 - CA264_01950 0.23 +2.6 452,142 + CA264_01950 0.31 -1.3 452,300 + CA264_01950 0.46 -0.8 452,390 - CA264_01950 0.55 +0.2 452,431 + CA264_01950 0.59 -0.8 452,435 - CA264_01950 0.59 -0.8 452,473 + CA264_01950 0.63 +0.1
Or see this region's nucleotide sequence