Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2270

Experiment: m.b. Vancomycin 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2268 and B158DRAFT_2269 are separated by 29 nucleotidesB158DRAFT_2269 and B158DRAFT_2270 are separated by 191 nucleotidesB158DRAFT_2270 and B158DRAFT_2271 are separated by 173 nucleotides B158DRAFT_2268: B158DRAFT_2268 - single-stranded-DNA-specific exonuclease RecJ, at 430,051 to 431,778 _2268 B158DRAFT_2269: B158DRAFT_2269 - hypothetical protein, at 431,808 to 432,227 _2269 B158DRAFT_2270: B158DRAFT_2270 - Small-conductance mechanosensitive channel, at 432,419 to 433,258 _2270 B158DRAFT_2271: B158DRAFT_2271 - MiaB-like tRNA modifying enzyme, at 433,432 to 434,775 _2271 Position (kb) 432 433 434Strain fitness (log2 ratio) -2 -1 0 1at 431.420 kb on + strand, within B158DRAFT_2268at 431.431 kb on - strand, within B158DRAFT_2268at 431.454 kb on + strand, within B158DRAFT_2268at 431.454 kb on + strand, within B158DRAFT_2268at 431.459 kb on + strand, within B158DRAFT_2268at 431.481 kb on - strand, within B158DRAFT_2268at 431.481 kb on - strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.483 kb on + strand, within B158DRAFT_2268at 431.491 kb on - strand, within B158DRAFT_2268at 431.491 kb on - strand, within B158DRAFT_2268at 431.544 kb on - strand, within B158DRAFT_2268at 431.609 kb on + strandat 431.617 kb on - strandat 431.634 kb on + strandat 431.642 kb on - strandat 431.642 kb on - strandat 431.656 kb on + strandat 431.688 kb on + strandat 431.688 kb on + strandat 431.696 kb on - strandat 431.696 kb on - strandat 431.731 kb on + strandat 431.767 kb on + strandat 431.775 kb on - strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.798 kb on + strandat 431.806 kb on - strandat 431.843 kb on + strandat 431.849 kb on - strandat 431.888 kb on + strand, within B158DRAFT_2269at 431.901 kb on - strand, within B158DRAFT_2269at 431.903 kb on + strand, within B158DRAFT_2269at 431.939 kb on + strand, within B158DRAFT_2269at 431.992 kb on - strand, within B158DRAFT_2269at 432.032 kb on - strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.034 kb on + strand, within B158DRAFT_2269at 432.039 kb on + strand, within B158DRAFT_2269at 432.042 kb on - strand, within B158DRAFT_2269at 432.042 kb on - strand, within B158DRAFT_2269at 432.047 kb on - strand, within B158DRAFT_2269at 432.047 kb on - strand, within B158DRAFT_2269at 432.076 kb on + strand, within B158DRAFT_2269at 432.076 kb on + strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.084 kb on - strand, within B158DRAFT_2269at 432.154 kb on - strand, within B158DRAFT_2269at 432.182 kb on + strand, within B158DRAFT_2269at 432.182 kb on + strand, within B158DRAFT_2269at 432.190 kb on - strandat 432.190 kb on - strandat 432.191 kb on - strandat 432.233 kb on - strandat 432.647 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.706 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.742 kb on + strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.750 kb on - strand, within B158DRAFT_2270at 432.752 kb on + strand, within B158DRAFT_2270at 432.791 kb on + strand, within B158DRAFT_2270at 432.801 kb on + strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.809 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.811 kb on - strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.832 kb on + strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.840 kb on - strand, within B158DRAFT_2270at 432.848 kb on - strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.869 kb on + strand, within B158DRAFT_2270at 432.877 kb on - strand, within B158DRAFT_2270at 432.952 kb on + strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 432.960 kb on - strand, within B158DRAFT_2270at 433.096 kb on - strand, within B158DRAFT_2270at 433.101 kb on - strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.123 kb on + strand, within B158DRAFT_2270at 433.128 kb on + strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.131 kb on - strand, within B158DRAFT_2270at 433.145 kb on - strand, within B158DRAFT_2270at 433.235 kb on - strandat 433.279 kb on - strandat 433.292 kb on - strandat 433.324 kb on + strandat 433.332 kb on - strandat 433.383 kb on + strandat 433.450 kb on + strandat 433.450 kb on + strandat 433.458 kb on - strandat 433.458 kb on - strandat 433.480 kb on + strandat 433.480 kb on + strandat 433.480 kb on + strandat 433.488 kb on - strandat 433.488 kb on - strandat 433.488 kb on - strandat 433.506 kb on + strandat 433.508 kb on + strandat 433.508 kb on + strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.516 kb on - strandat 433.533 kb on + strandat 433.541 kb on - strandat 433.631 kb on + strand, within B158DRAFT_2271at 433.641 kb on - strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.695 kb on + strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.703 kb on - strand, within B158DRAFT_2271at 433.778 kb on - strand, within B158DRAFT_2271at 433.912 kb on + strand, within B158DRAFT_2271at 433.946 kb on + strand, within B158DRAFT_2271at 433.946 kb on + strand, within B158DRAFT_2271at 434.014 kb on + strand, within B158DRAFT_2271at 434.212 kb on - strand, within B158DRAFT_2271at 434.212 kb on - strand, within B158DRAFT_2271at 434.256 kb on + strand, within B158DRAFT_2271at 434.256 kb on + strand, within B158DRAFT_2271

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml
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431,420 + B158DRAFT_2268 0.79 -1.7
431,431 - B158DRAFT_2268 0.80 -1.2
431,454 + B158DRAFT_2268 0.81 -1.8
431,454 + B158DRAFT_2268 0.81 +0.2
431,459 + B158DRAFT_2268 0.81 -1.7
431,481 - B158DRAFT_2268 0.83 -1.8
431,481 - B158DRAFT_2268 0.83 -1.1
431,483 + B158DRAFT_2268 0.83 -1.1
431,483 + B158DRAFT_2268 0.83 -0.8
431,483 + B158DRAFT_2268 0.83 -1.8
431,483 + B158DRAFT_2268 0.83 -1.6
431,491 - B158DRAFT_2268 0.83 -1.2
431,491 - B158DRAFT_2268 0.83 -1.2
431,544 - B158DRAFT_2268 0.86 -1.4
431,609 + -1.2
431,617 - -0.9
431,634 + -0.8
431,642 - -2.4
431,642 - -1.0
431,656 + -0.4
431,688 + -1.2
431,688 + -1.1
431,696 - -1.0
431,696 - -0.9
431,731 + -1.8
431,767 + -0.4
431,775 - +0.1
431,798 + +0.1
431,798 + -0.4
431,798 + -0.1
431,798 + -0.3
431,806 - +0.1
431,843 + -0.4
431,849 - -0.3
431,888 + B158DRAFT_2269 0.19 +0.2
431,901 - B158DRAFT_2269 0.22 -0.5
431,903 + B158DRAFT_2269 0.23 +0.3
431,939 + B158DRAFT_2269 0.31 +0.1
431,992 - B158DRAFT_2269 0.44 +0.1
432,032 - B158DRAFT_2269 0.53 +0.4
432,034 + B158DRAFT_2269 0.54 -0.1
432,034 + B158DRAFT_2269 0.54 -0.5
432,034 + B158DRAFT_2269 0.54 -0.1
432,039 + B158DRAFT_2269 0.55 -0.0
432,042 - B158DRAFT_2269 0.56 -0.6
432,042 - B158DRAFT_2269 0.56 -0.3
432,047 - B158DRAFT_2269 0.57 -0.0
432,047 - B158DRAFT_2269 0.57 -0.3
432,076 + B158DRAFT_2269 0.64 +0.2
432,076 + B158DRAFT_2269 0.64 -0.2
432,084 - B158DRAFT_2269 0.66 -0.3
432,084 - B158DRAFT_2269 0.66 +0.3
432,084 - B158DRAFT_2269 0.66 -0.2
432,154 - B158DRAFT_2269 0.82 -0.3
432,182 + B158DRAFT_2269 0.89 -0.1
432,182 + B158DRAFT_2269 0.89 -0.4
432,190 - +0.5
432,190 - +1.3
432,191 - -0.0
432,233 - +0.3
432,647 + B158DRAFT_2270 0.27 -0.4
432,706 + B158DRAFT_2270 0.34 +0.1
432,706 + B158DRAFT_2270 0.34 -1.0
432,742 + B158DRAFT_2270 0.38 -0.0
432,742 + B158DRAFT_2270 0.38 -0.0
432,742 + B158DRAFT_2270 0.38 +0.5
432,750 - B158DRAFT_2270 0.39 -0.3
432,750 - B158DRAFT_2270 0.39 -0.1
432,750 - B158DRAFT_2270 0.39 +0.2
432,750 - B158DRAFT_2270 0.39 -0.4
432,752 + B158DRAFT_2270 0.40 -0.3
432,791 + B158DRAFT_2270 0.44 -0.4
432,801 + B158DRAFT_2270 0.45 +0.2
432,809 - B158DRAFT_2270 0.46 -0.3
432,809 - B158DRAFT_2270 0.46 -0.0
432,809 - B158DRAFT_2270 0.46 -0.4
432,811 - B158DRAFT_2270 0.47 -0.3
432,811 - B158DRAFT_2270 0.47 -1.1
432,832 + B158DRAFT_2270 0.49 -0.3
432,832 + B158DRAFT_2270 0.49 -0.3
432,832 + B158DRAFT_2270 0.49 -0.4
432,832 + B158DRAFT_2270 0.49 -0.2
432,840 - B158DRAFT_2270 0.50 +0.1
432,840 - B158DRAFT_2270 0.50 -0.2
432,840 - B158DRAFT_2270 0.50 +0.1
432,840 - B158DRAFT_2270 0.50 +0.2
432,840 - B158DRAFT_2270 0.50 -0.1
432,840 - B158DRAFT_2270 0.50 -0.2
432,840 - B158DRAFT_2270 0.50 -0.1
432,840 - B158DRAFT_2270 0.50 -0.2
432,840 - B158DRAFT_2270 0.50 +0.2
432,848 - B158DRAFT_2270 0.51 -0.5
432,869 + B158DRAFT_2270 0.54 -0.3
432,869 + B158DRAFT_2270 0.54 -0.3
432,869 + B158DRAFT_2270 0.54 -0.2
432,877 - B158DRAFT_2270 0.55 -0.2
432,952 + B158DRAFT_2270 0.63 -0.3
432,960 - B158DRAFT_2270 0.64 -0.4
432,960 - B158DRAFT_2270 0.64 -0.1
433,096 - B158DRAFT_2270 0.81 -0.2
433,101 - B158DRAFT_2270 0.81 +0.1
433,123 + B158DRAFT_2270 0.84 +0.5
433,123 + B158DRAFT_2270 0.84 +0.6
433,123 + B158DRAFT_2270 0.84 -0.0
433,128 + B158DRAFT_2270 0.84 +0.3
433,131 - B158DRAFT_2270 0.85 -1.0
433,131 - B158DRAFT_2270 0.85 -0.4
433,131 - B158DRAFT_2270 0.85 -0.2
433,145 - B158DRAFT_2270 0.86 -0.2
433,235 - -0.2
433,279 - +0.1
433,292 - -0.1
433,324 + -0.5
433,332 - -0.4
433,383 + -0.0
433,450 + -0.2
433,450 + -0.5
433,458 - -0.4
433,458 - -0.7
433,480 + -0.9
433,480 + +0.1
433,480 + -0.0
433,488 - +0.1
433,488 - -0.1
433,488 - -0.2
433,506 + +0.1
433,508 + -0.8
433,508 + -0.6
433,516 - -0.1
433,516 - -0.5
433,516 - -0.2
433,516 - -0.4
433,533 + -0.6
433,541 - -0.2
433,631 + B158DRAFT_2271 0.15 -0.1
433,641 - B158DRAFT_2271 0.16 -0.4
433,695 + B158DRAFT_2271 0.20 -0.9
433,695 + B158DRAFT_2271 0.20 -1.1
433,695 + B158DRAFT_2271 0.20 -0.4
433,695 + B158DRAFT_2271 0.20 -0.7
433,695 + B158DRAFT_2271 0.20 -0.1
433,695 + B158DRAFT_2271 0.20 -0.7
433,695 + B158DRAFT_2271 0.20 -0.7
433,703 - B158DRAFT_2271 0.20 -0.6
433,703 - B158DRAFT_2271 0.20 -0.5
433,703 - B158DRAFT_2271 0.20 -0.6
433,703 - B158DRAFT_2271 0.20 -0.2
433,703 - B158DRAFT_2271 0.20 -0.7
433,703 - B158DRAFT_2271 0.20 -0.9
433,703 - B158DRAFT_2271 0.20 -0.1
433,778 - B158DRAFT_2271 0.26 -0.1
433,912 + B158DRAFT_2271 0.36 -0.3
433,946 + B158DRAFT_2271 0.38 +0.0
433,946 + B158DRAFT_2271 0.38 -0.5
434,014 + B158DRAFT_2271 0.43 -0.4
434,212 - B158DRAFT_2271 0.58 -0.7
434,212 - B158DRAFT_2271 0.58 -1.0
434,256 + B158DRAFT_2271 0.61 -0.8
434,256 + B158DRAFT_2271 0.61 -0.3

Or see this region's nucleotide sequence