Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2091

Experiment: m.b. Vancomycin 0.125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2090 and B158DRAFT_2091 are separated by 27 nucleotidesB158DRAFT_2091 and B158DRAFT_2092 are separated by 105 nucleotidesB158DRAFT_2092 and B158DRAFT_2093 are separated by 126 nucleotides B158DRAFT_2090: B158DRAFT_2090 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 227,336 to 228,502 _2090 B158DRAFT_2091: B158DRAFT_2091 - Uncharacterized protein conserved in bacteria, at 228,530 to 229,156 _2091 B158DRAFT_2092: B158DRAFT_2092 - Predicted membrane protein, at 229,262 to 229,948 _2092 B158DRAFT_2093: B158DRAFT_2093 - hypothetical protein, at 230,075 to 230,389 _2093 Position (kb) 228 229 230Strain fitness (log2 ratio) -2 -1 0 1at 227.546 kb on + strand, within B158DRAFT_2090at 227.551 kb on - strand, within B158DRAFT_2090at 227.565 kb on - strand, within B158DRAFT_2090at 227.660 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.717 kb on + strand, within B158DRAFT_2090at 227.728 kb on - strand, within B158DRAFT_2090at 227.804 kb on - strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.824 kb on + strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.947 kb on - strand, within B158DRAFT_2090at 227.949 kb on + strand, within B158DRAFT_2090at 227.981 kb on + strand, within B158DRAFT_2090at 228.041 kb on + strand, within B158DRAFT_2090at 228.093 kb on - strand, within B158DRAFT_2090at 228.103 kb on + strand, within B158DRAFT_2090at 228.106 kb on - strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.245 kb on - strand, within B158DRAFT_2090at 228.256 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.264 kb on + strand, within B158DRAFT_2090at 228.265 kb on + strand, within B158DRAFT_2090at 228.272 kb on - strand, within B158DRAFT_2090at 228.272 kb on - strand, within B158DRAFT_2090at 228.281 kb on + strand, within B158DRAFT_2090at 228.281 kb on + strand, within B158DRAFT_2090at 228.289 kb on - strand, within B158DRAFT_2090at 228.309 kb on + strand, within B158DRAFT_2090at 228.309 kb on + strand, within B158DRAFT_2090at 228.311 kb on - strand, within B158DRAFT_2090at 228.364 kb on + strand, within B158DRAFT_2090at 228.370 kb on - strand, within B158DRAFT_2090at 228.373 kb on + strand, within B158DRAFT_2090at 228.401 kb on - strandat 228.445 kb on + strandat 228.522 kb on - strandat 228.536 kb on + strandat 228.625 kb on - strand, within B158DRAFT_2091at 228.647 kb on - strand, within B158DRAFT_2091at 228.701 kb on + strand, within B158DRAFT_2091at 228.709 kb on - strand, within B158DRAFT_2091at 228.761 kb on + strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.856 kb on - strand, within B158DRAFT_2091at 228.902 kb on - strand, within B158DRAFT_2091at 228.902 kb on - strand, within B158DRAFT_2091at 228.971 kb on + strand, within B158DRAFT_2091at 229.167 kb on + strandat 229.389 kb on + strand, within B158DRAFT_2092at 229.506 kb on + strand, within B158DRAFT_2092at 229.506 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.688 kb on + strand, within B158DRAFT_2092at 229.696 kb on - strand, within B158DRAFT_2092at 229.720 kb on - strand, within B158DRAFT_2092at 229.774 kb on + strand, within B158DRAFT_2092at 229.782 kb on - strand, within B158DRAFT_2092at 229.811 kb on + strand, within B158DRAFT_2092at 229.811 kb on - strand, within B158DRAFT_2092at 229.817 kb on + strand, within B158DRAFT_2092at 229.818 kb on - strand, within B158DRAFT_2092at 229.825 kb on - strand, within B158DRAFT_2092at 229.828 kb on + strand, within B158DRAFT_2092at 229.843 kb on - strand, within B158DRAFT_2092at 229.919 kb on - strandat 229.941 kb on - strandat 229.941 kb on - strandat 229.941 kb on - strandat 229.965 kb on + strandat 229.965 kb on + strandat 229.991 kb on - strandat 230.030 kb on - strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml
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227,546 + B158DRAFT_2090 0.18 -0.9
227,551 - B158DRAFT_2090 0.18 -1.2
227,565 - B158DRAFT_2090 0.20 -1.0
227,660 + B158DRAFT_2090 0.28 -0.9
227,665 + B158DRAFT_2090 0.28 -1.0
227,665 + B158DRAFT_2090 0.28 -1.3
227,665 + B158DRAFT_2090 0.28 -1.3
227,673 - B158DRAFT_2090 0.29 -0.8
227,673 - B158DRAFT_2090 0.29 -0.7
227,679 + B158DRAFT_2090 0.29 -1.3
227,679 + B158DRAFT_2090 0.29 -0.7
227,679 + B158DRAFT_2090 0.29 +0.1
227,687 - B158DRAFT_2090 0.30 -1.3
227,687 - B158DRAFT_2090 0.30 -1.3
227,717 + B158DRAFT_2090 0.33 -0.6
227,728 - B158DRAFT_2090 0.34 -1.0
227,804 - B158DRAFT_2090 0.40 -0.7
227,817 + B158DRAFT_2090 0.41 -1.0
227,817 + B158DRAFT_2090 0.41 -1.4
227,817 + B158DRAFT_2090 0.41 -1.0
227,817 + B158DRAFT_2090 0.41 -0.7
227,824 + B158DRAFT_2090 0.42 -0.6
227,825 - B158DRAFT_2090 0.42 -1.0
227,825 - B158DRAFT_2090 0.42 -1.1
227,825 - B158DRAFT_2090 0.42 -0.8
227,825 - B158DRAFT_2090 0.42 -1.0
227,825 - B158DRAFT_2090 0.42 -0.9
227,825 - B158DRAFT_2090 0.42 -0.5
227,825 - B158DRAFT_2090 0.42 -1.0
227,825 - B158DRAFT_2090 0.42 -1.0
227,825 - B158DRAFT_2090 0.42 -0.7
227,825 - B158DRAFT_2090 0.42 -1.1
227,825 - B158DRAFT_2090 0.42 -0.9
227,947 - B158DRAFT_2090 0.52 -0.9
227,949 + B158DRAFT_2090 0.53 -1.6
227,981 + B158DRAFT_2090 0.55 -2.2
228,041 + B158DRAFT_2090 0.60 -1.2
228,093 - B158DRAFT_2090 0.65 -0.8
228,103 + B158DRAFT_2090 0.66 -0.9
228,106 - B158DRAFT_2090 0.66 -0.8
228,123 + B158DRAFT_2090 0.67 -0.7
228,123 + B158DRAFT_2090 0.67 -1.3
228,123 + B158DRAFT_2090 0.67 -1.0
228,123 + B158DRAFT_2090 0.67 +0.7
228,123 + B158DRAFT_2090 0.67 -0.4
228,123 + B158DRAFT_2090 0.67 -0.3
228,123 + B158DRAFT_2090 0.67 -0.5
228,123 + B158DRAFT_2090 0.67 -0.3
228,131 - B158DRAFT_2090 0.68 -1.2
228,131 - B158DRAFT_2090 0.68 -0.9
228,131 - B158DRAFT_2090 0.68 -1.1
228,131 - B158DRAFT_2090 0.68 -0.8
228,131 - B158DRAFT_2090 0.68 -0.9
228,131 - B158DRAFT_2090 0.68 -1.2
228,131 - B158DRAFT_2090 0.68 -1.3
228,131 - B158DRAFT_2090 0.68 -1.1
228,131 - B158DRAFT_2090 0.68 +0.6
228,131 - B158DRAFT_2090 0.68 -1.3
228,245 - B158DRAFT_2090 0.78 -1.4
228,256 + B158DRAFT_2090 0.79 -2.1
228,264 + B158DRAFT_2090 0.80 -1.1
228,264 + B158DRAFT_2090 0.80 -0.9
228,264 + B158DRAFT_2090 0.80 -0.7
228,265 + B158DRAFT_2090 0.80 -1.1
228,272 - B158DRAFT_2090 0.80 -0.7
228,272 - B158DRAFT_2090 0.80 -1.4
228,281 + B158DRAFT_2090 0.81 -1.1
228,281 + B158DRAFT_2090 0.81 -2.0
228,289 - B158DRAFT_2090 0.82 -0.9
228,309 + B158DRAFT_2090 0.83 -1.5
228,309 + B158DRAFT_2090 0.83 -1.0
228,311 - B158DRAFT_2090 0.84 -0.1
228,364 + B158DRAFT_2090 0.88 -1.4
228,370 - B158DRAFT_2090 0.89 -1.1
228,373 + B158DRAFT_2090 0.89 -1.2
228,401 - -1.2
228,445 + -0.7
228,522 - +0.2
228,536 + -0.7
228,625 - B158DRAFT_2091 0.15 +0.4
228,647 - B158DRAFT_2091 0.19 -0.4
228,701 + B158DRAFT_2091 0.27 -0.6
228,709 - B158DRAFT_2091 0.29 -0.4
228,761 + B158DRAFT_2091 0.37 -0.3
228,856 - B158DRAFT_2091 0.52 -0.4
228,856 - B158DRAFT_2091 0.52 +0.2
228,856 - B158DRAFT_2091 0.52 -0.2
228,902 - B158DRAFT_2091 0.59 -0.1
228,902 - B158DRAFT_2091 0.59 -0.3
228,971 + B158DRAFT_2091 0.70 -0.4
229,167 + -0.1
229,389 + B158DRAFT_2092 0.18 -0.0
229,506 + B158DRAFT_2092 0.36 -0.1
229,506 + B158DRAFT_2092 0.36 -1.2
229,654 + B158DRAFT_2092 0.57 -0.0
229,654 + B158DRAFT_2092 0.57 -0.2
229,654 + B158DRAFT_2092 0.57 -0.4
229,654 + B158DRAFT_2092 0.57 +0.1
229,662 - B158DRAFT_2092 0.58 -0.4
229,662 - B158DRAFT_2092 0.58 -0.2
229,662 - B158DRAFT_2092 0.58 -0.1
229,662 - B158DRAFT_2092 0.58 +0.6
229,662 - B158DRAFT_2092 0.58 -0.4
229,688 + B158DRAFT_2092 0.62 +0.2
229,696 - B158DRAFT_2092 0.63 +0.4
229,720 - B158DRAFT_2092 0.67 -0.1
229,774 + B158DRAFT_2092 0.75 -0.4
229,782 - B158DRAFT_2092 0.76 -0.2
229,811 + B158DRAFT_2092 0.80 +0.0
229,811 - B158DRAFT_2092 0.80 +0.1
229,817 + B158DRAFT_2092 0.81 -0.1
229,818 - B158DRAFT_2092 0.81 +0.1
229,825 - B158DRAFT_2092 0.82 -0.5
229,828 + B158DRAFT_2092 0.82 -0.5
229,843 - B158DRAFT_2092 0.85 +0.1
229,919 - -0.0
229,941 - -0.5
229,941 - -0.0
229,941 - +0.5
229,965 + -0.4
229,965 + -0.4
229,991 - +0.0
230,030 - +0.1
230,064 + -0.7
230,064 + -0.1
230,064 + -0.3
230,064 + -0.2
230,064 + -0.3
230,072 - -0.4
230,072 - -0.8
230,072 - -0.0
230,072 - -0.2
230,072 - -0.3

Or see this region's nucleotide sequence