Experiment: m.b. Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1537 and B158DRAFT_1538 are separated by 126 nucleotides B158DRAFT_1538 and B158DRAFT_1539 are separated by 320 nucleotides B158DRAFT_1539 and B158DRAFT_1540 are separated by 184 nucleotides B158DRAFT_1540 and B158DRAFT_1541 are separated by 195 nucleotides
B158DRAFT_1537: B158DRAFT_1537 - hypothetical protein, at 1,591,864 to 1,592,316
_1537
B158DRAFT_1538: B158DRAFT_1538 - Uncharacterized conserved protein, at 1,592,443 to 1,592,655
_1538
B158DRAFT_1539: B158DRAFT_1539 - hypothetical protein, at 1,592,976 to 1,595,576
_1539
B158DRAFT_1540: B158DRAFT_1540 - hypothetical protein, at 1,595,761 to 1,596,012
_1540
B158DRAFT_1541: B158DRAFT_1541 - ABC-type antimicrobial peptide transport system, ATPase component, at 1,596,208 to 1,596,966
_1541
Position (kb)
1592
1593
1594
1595
1596 Strain fitness (log2 ratio)
-1
0
1 at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.944 kb on + strand at 1592.958 kb on - strand at 1593.199 kb on - strand at 1593.419 kb on + strand, within B158DRAFT_1539 at 1593.608 kb on + strand, within B158DRAFT_1539 at 1593.641 kb on + strand, within B158DRAFT_1539 at 1593.748 kb on + strand, within B158DRAFT_1539 at 1594.109 kb on + strand, within B158DRAFT_1539 at 1594.117 kb on - strand, within B158DRAFT_1539 at 1594.326 kb on - strand, within B158DRAFT_1539 at 1594.378 kb on - strand, within B158DRAFT_1539 at 1594.658 kb on - strand, within B158DRAFT_1539 at 1594.770 kb on - strand, within B158DRAFT_1539 at 1594.857 kb on - strand, within B158DRAFT_1539 at 1595.017 kb on - strand, within B158DRAFT_1539 at 1595.094 kb on + strand, within B158DRAFT_1539 at 1595.102 kb on - strand, within B158DRAFT_1539 at 1595.108 kb on + strand, within B158DRAFT_1539 at 1595.224 kb on - strand, within B158DRAFT_1539 at 1595.438 kb on + strand at 1595.805 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.879 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.949 kb on + strand, within B158DRAFT_1540 at 1595.957 kb on - strand, within B158DRAFT_1540 at 1595.969 kb on - strand, within B158DRAFT_1540 at 1596.096 kb on + strand at 1596.117 kb on + strand at 1596.171 kb on + strand at 1596.179 kb on - strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.261 kb on + strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.269 kb on - strand at 1596.274 kb on - strand at 1596.281 kb on + strand at 1596.289 kb on - strand, within B158DRAFT_1541 at 1596.291 kb on + strand, within B158DRAFT_1541 at 1596.298 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.315 kb on + strand, within B158DRAFT_1541 at 1596.328 kb on + strand, within B158DRAFT_1541 at 1596.344 kb on + strand, within B158DRAFT_1541 at 1596.387 kb on + strand, within B158DRAFT_1541 at 1596.395 kb on - strand, within B158DRAFT_1541 at 1596.427 kb on + strand, within B158DRAFT_1541 at 1596.428 kb on + strand, within B158DRAFT_1541 at 1596.435 kb on - strand, within B158DRAFT_1541 at 1596.453 kb on + strand, within B158DRAFT_1541 at 1596.496 kb on - strand, within B158DRAFT_1541 at 1596.550 kb on - strand, within B158DRAFT_1541
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml remove 1,592,944 + -0.3 1,592,944 + +0.2 1,592,944 + -0.2 1,592,944 + -0.1 1,592,958 - -0.0 1,593,199 - +0.1 1,593,419 + B158DRAFT_1539 0.17 -0.3 1,593,608 + B158DRAFT_1539 0.24 +0.2 1,593,641 + B158DRAFT_1539 0.26 -0.1 1,593,748 + B158DRAFT_1539 0.30 -0.5 1,594,109 + B158DRAFT_1539 0.44 -0.3 1,594,117 - B158DRAFT_1539 0.44 -0.2 1,594,326 - B158DRAFT_1539 0.52 -1.1 1,594,378 - B158DRAFT_1539 0.54 -0.6 1,594,658 - B158DRAFT_1539 0.65 -0.2 1,594,770 - B158DRAFT_1539 0.69 -0.8 1,594,857 - B158DRAFT_1539 0.72 -0.3 1,595,017 - B158DRAFT_1539 0.78 +0.2 1,595,094 + B158DRAFT_1539 0.81 -0.5 1,595,102 - B158DRAFT_1539 0.82 -0.3 1,595,108 + B158DRAFT_1539 0.82 -1.2 1,595,224 - B158DRAFT_1539 0.86 +0.2 1,595,438 + -0.0 1,595,805 + B158DRAFT_1540 0.17 +0.1 1,595,879 + B158DRAFT_1540 0.47 -0.1 1,595,879 + B158DRAFT_1540 0.47 -0.3 1,595,949 + B158DRAFT_1540 0.75 +0.0 1,595,949 + B158DRAFT_1540 0.75 -0.2 1,595,949 + B158DRAFT_1540 0.75 -0.0 1,595,957 - B158DRAFT_1540 0.78 -0.4 1,595,969 - B158DRAFT_1540 0.83 -0.1 1,596,096 + +0.0 1,596,117 + +0.0 1,596,171 + -0.0 1,596,179 - -0.4 1,596,261 + -0.4 1,596,261 + -0.5 1,596,261 + +0.4 1,596,261 + -0.8 1,596,261 + -0.4 1,596,261 + -0.1 1,596,261 + +0.2 1,596,261 + -0.4 1,596,261 + -0.5 1,596,261 + -0.4 1,596,261 + +0.2 1,596,261 + -0.7 1,596,261 + -0.6 1,596,261 + -0.1 1,596,261 + -0.7 1,596,261 + -0.4 1,596,261 + -0.2 1,596,261 + -0.6 1,596,261 + -0.3 1,596,261 + +0.2 1,596,261 + +0.2 1,596,261 + -0.2 1,596,261 + -0.1 1,596,261 + -0.6 1,596,261 + -0.1 1,596,261 + +0.1 1,596,261 + -0.1 1,596,261 + -0.6 1,596,261 + +0.0 1,596,261 + +0.1 1,596,261 + -0.3 1,596,261 + +0.1 1,596,269 - -0.3 1,596,269 - -0.6 1,596,269 - -0.6 1,596,269 - +0.1 1,596,269 - -0.2 1,596,269 - -0.2 1,596,269 - -0.2 1,596,269 - -0.4 1,596,269 - -0.0 1,596,269 - -0.9 1,596,269 - -0.2 1,596,269 - -0.5 1,596,269 - -0.7 1,596,269 - -0.3 1,596,269 - -0.5 1,596,269 - -0.2 1,596,269 - -0.1 1,596,269 - -0.4 1,596,269 - -0.5 1,596,269 - -0.2 1,596,269 - +0.0 1,596,269 - -0.7 1,596,269 - -0.0 1,596,274 - +0.0 1,596,281 + -0.4 1,596,289 - B158DRAFT_1541 0.11 +0.3 1,596,291 + B158DRAFT_1541 0.11 -0.1 1,596,298 + B158DRAFT_1541 0.12 +0.0 1,596,315 + B158DRAFT_1541 0.14 +1.1 1,596,315 + B158DRAFT_1541 0.14 -0.4 1,596,315 + B158DRAFT_1541 0.14 +0.3 1,596,328 + B158DRAFT_1541 0.16 +0.2 1,596,344 + B158DRAFT_1541 0.18 +0.0 1,596,387 + B158DRAFT_1541 0.24 -1.5 1,596,395 - B158DRAFT_1541 0.25 -1.1 1,596,427 + B158DRAFT_1541 0.29 -0.1 1,596,428 + B158DRAFT_1541 0.29 +0.1 1,596,435 - B158DRAFT_1541 0.30 -0.2 1,596,453 + B158DRAFT_1541 0.32 +0.1 1,596,496 - B158DRAFT_1541 0.38 -0.3 1,596,550 - B158DRAFT_1541 0.45 +0.2
Or see this region's nucleotide sequence