Experiment: m.b. Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1136 and B158DRAFT_1137 are separated by 106 nucleotides B158DRAFT_1137 and B158DRAFT_1138 overlap by 14 nucleotides B158DRAFT_1138 and B158DRAFT_1139 are separated by 8 nucleotides
B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319
_1136
B158DRAFT_1137: B158DRAFT_1137 - tol-pal system-associated acyl-CoA thioesterase, at 1,176,426 to 1,176,845
_1137
B158DRAFT_1138: B158DRAFT_1138 - Cell division and transport-associated protein TolQ (TC 2.C.1.2.1), at 1,176,832 to 1,177,545
_1138
B158DRAFT_1139: B158DRAFT_1139 - Cell division and transport-associated protein TolR (TC 2.C.1.2.1), at 1,177,554 to 1,177,982
_1139
Position (kb)
1176
1177 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1175.459 kb on + strand, within B158DRAFT_1136 at 1175.479 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.565 kb on - strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.610 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.627 kb on - strand, within B158DRAFT_1136 at 1175.649 kb on + strand, within B158DRAFT_1136 at 1175.657 kb on - strand, within B158DRAFT_1136 at 1175.682 kb on - strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1176.060 kb on - strand, within B158DRAFT_1136 at 1176.077 kb on + strand, within B158DRAFT_1136 at 1176.085 kb on - strand, within B158DRAFT_1136 at 1176.116 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.142 kb on - strand, within B158DRAFT_1136 at 1176.246 kb on - strand at 1176.428 kb on - strand at 1176.623 kb on + strand, within B158DRAFT_1137
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml remove 1,175,459 + B158DRAFT_1136 0.16 -1.1 1,175,479 - B158DRAFT_1136 0.18 -1.4 1,175,564 - B158DRAFT_1136 0.26 -0.9 1,175,564 - B158DRAFT_1136 0.26 -3.0 1,175,564 - B158DRAFT_1136 0.26 -2.0 1,175,564 - B158DRAFT_1136 0.26 +0.4 1,175,565 - B158DRAFT_1136 0.26 -1.2 1,175,607 + B158DRAFT_1136 0.30 -0.5 1,175,607 + B158DRAFT_1136 0.30 -3.1 1,175,607 + B158DRAFT_1136 0.30 -1.5 1,175,610 - B158DRAFT_1136 0.30 -2.1 1,175,615 - B158DRAFT_1136 0.31 -0.3 1,175,615 - B158DRAFT_1136 0.31 -0.8 1,175,615 - B158DRAFT_1136 0.31 -3.1 1,175,615 - B158DRAFT_1136 0.31 -0.8 1,175,627 - B158DRAFT_1136 0.32 -1.9 1,175,649 + B158DRAFT_1136 0.34 -2.3 1,175,657 - B158DRAFT_1136 0.35 -1.4 1,175,682 - B158DRAFT_1136 0.37 -2.1 1,175,795 + B158DRAFT_1136 0.49 -3.2 1,175,795 + B158DRAFT_1136 0.49 -0.9 1,175,795 + B158DRAFT_1136 0.49 -0.9 1,175,795 + B158DRAFT_1136 0.49 -1.3 1,175,831 + B158DRAFT_1136 0.52 -2.7 1,175,831 + B158DRAFT_1136 0.52 -0.8 1,175,839 - B158DRAFT_1136 0.53 -0.9 1,175,839 - B158DRAFT_1136 0.53 -3.3 1,176,060 - B158DRAFT_1136 0.75 -3.1 1,176,077 + B158DRAFT_1136 0.76 -1.8 1,176,085 - B158DRAFT_1136 0.77 -1.8 1,176,116 + B158DRAFT_1136 0.80 -0.7 1,176,134 + B158DRAFT_1136 0.82 +0.1 1,176,134 + B158DRAFT_1136 0.82 -2.1 1,176,142 - B158DRAFT_1136 0.83 -1.6 1,176,246 - -1.3 1,176,428 - -0.6 1,176,623 + B158DRAFT_1137 0.47 -0.9
Or see this region's nucleotide sequence