Experiment: m.b. Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1057 and B158DRAFT_1058 overlap by 14 nucleotides B158DRAFT_1058 and B158DRAFT_1059 are separated by 1 nucleotides
B158DRAFT_1057: B158DRAFT_1057 - TIGR01620 family protein, at 1,097,679 to 1,098,761
_1057
B158DRAFT_1058: B158DRAFT_1058 - ABC-type Na+ transport system, ATPase component, at 1,098,748 to 1,099,545
_1058
B158DRAFT_1059: B158DRAFT_1059 - ABC-type Na+ efflux pump, permease component, at 1,099,547 to 1,100,791
_1059
Position (kb)
1098
1099
1100 Strain fitness (log2 ratio)
-2
-1
0
1 at 1097.926 kb on - strand, within B158DRAFT_1057 at 1097.989 kb on + strand, within B158DRAFT_1057 at 1098.029 kb on - strand, within B158DRAFT_1057 at 1098.076 kb on + strand, within B158DRAFT_1057 at 1098.111 kb on - strand, within B158DRAFT_1057 at 1098.259 kb on - strand, within B158DRAFT_1057 at 1098.291 kb on - strand, within B158DRAFT_1057 at 1098.399 kb on + strand, within B158DRAFT_1057 at 1098.407 kb on - strand, within B158DRAFT_1057 at 1098.407 kb on - strand, within B158DRAFT_1057 at 1098.428 kb on - strand, within B158DRAFT_1057 at 1098.537 kb on - strand, within B158DRAFT_1057 at 1098.537 kb on - strand, within B158DRAFT_1057 at 1098.611 kb on + strand, within B158DRAFT_1057 at 1098.611 kb on + strand, within B158DRAFT_1057 at 1098.611 kb on + strand, within B158DRAFT_1057 at 1098.619 kb on - strand, within B158DRAFT_1057 at 1098.823 kb on - strand at 1098.848 kb on - strand, within B158DRAFT_1058 at 1098.850 kb on + strand, within B158DRAFT_1058 at 1098.889 kb on - strand, within B158DRAFT_1058 at 1098.889 kb on - strand, within B158DRAFT_1058 at 1098.959 kb on - strand, within B158DRAFT_1058 at 1099.054 kb on + strand, within B158DRAFT_1058 at 1099.076 kb on + strand, within B158DRAFT_1058 at 1099.179 kb on + strand, within B158DRAFT_1058 at 1099.263 kb on + strand, within B158DRAFT_1058 at 1099.268 kb on + strand, within B158DRAFT_1058 at 1099.270 kb on + strand, within B158DRAFT_1058 at 1099.351 kb on - strand, within B158DRAFT_1058 at 1099.483 kb on + strand at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.725 kb on + strand, within B158DRAFT_1059 at 1099.733 kb on - strand, within B158DRAFT_1059 at 1099.733 kb on - strand, within B158DRAFT_1059 at 1099.733 kb on - strand, within B158DRAFT_1059 at 1099.733 kb on - strand, within B158DRAFT_1059 at 1099.733 kb on - strand, within B158DRAFT_1059 at 1099.991 kb on + strand, within B158DRAFT_1059 at 1100.026 kb on + strand, within B158DRAFT_1059 at 1100.034 kb on - strand, within B158DRAFT_1059 at 1100.034 kb on - strand, within B158DRAFT_1059 at 1100.155 kb on + strand, within B158DRAFT_1059 at 1100.473 kb on - strand, within B158DRAFT_1059 at 1100.531 kb on + strand, within B158DRAFT_1059 at 1100.539 kb on - strand, within B158DRAFT_1059 at 1100.544 kb on - strand, within B158DRAFT_1059
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml remove 1,097,926 - B158DRAFT_1057 0.23 -0.4 1,097,989 + B158DRAFT_1057 0.29 -0.0 1,098,029 - B158DRAFT_1057 0.32 -0.7 1,098,076 + B158DRAFT_1057 0.37 -1.8 1,098,111 - B158DRAFT_1057 0.40 -0.1 1,098,259 - B158DRAFT_1057 0.54 +0.1 1,098,291 - B158DRAFT_1057 0.57 -0.2 1,098,399 + B158DRAFT_1057 0.66 -0.5 1,098,407 - B158DRAFT_1057 0.67 -0.3 1,098,407 - B158DRAFT_1057 0.67 -0.1 1,098,428 - B158DRAFT_1057 0.69 +0.1 1,098,537 - B158DRAFT_1057 0.79 -0.7 1,098,537 - B158DRAFT_1057 0.79 -0.4 1,098,611 + B158DRAFT_1057 0.86 -0.4 1,098,611 + B158DRAFT_1057 0.86 -0.4 1,098,611 + B158DRAFT_1057 0.86 -0.0 1,098,619 - B158DRAFT_1057 0.87 -0.2 1,098,823 - -0.5 1,098,848 - B158DRAFT_1058 0.13 -0.2 1,098,850 + B158DRAFT_1058 0.13 -1.4 1,098,889 - B158DRAFT_1058 0.18 -1.0 1,098,889 - B158DRAFT_1058 0.18 -0.6 1,098,959 - B158DRAFT_1058 0.26 -0.7 1,099,054 + B158DRAFT_1058 0.38 -1.9 1,099,076 + B158DRAFT_1058 0.41 -1.7 1,099,179 + B158DRAFT_1058 0.54 -0.6 1,099,263 + B158DRAFT_1058 0.65 -1.1 1,099,268 + B158DRAFT_1058 0.65 -1.3 1,099,270 + B158DRAFT_1058 0.65 -0.4 1,099,351 - B158DRAFT_1058 0.76 -1.2 1,099,483 + -0.7 1,099,725 + B158DRAFT_1059 0.14 -0.8 1,099,725 + B158DRAFT_1059 0.14 -1.1 1,099,725 + B158DRAFT_1059 0.14 -1.3 1,099,725 + B158DRAFT_1059 0.14 -1.0 1,099,725 + B158DRAFT_1059 0.14 -1.1 1,099,725 + B158DRAFT_1059 0.14 -1.1 1,099,733 - B158DRAFT_1059 0.15 -0.7 1,099,733 - B158DRAFT_1059 0.15 -1.6 1,099,733 - B158DRAFT_1059 0.15 -1.1 1,099,733 - B158DRAFT_1059 0.15 -1.2 1,099,733 - B158DRAFT_1059 0.15 +0.8 1,099,991 + B158DRAFT_1059 0.36 -1.4 1,100,026 + B158DRAFT_1059 0.38 -1.1 1,100,034 - B158DRAFT_1059 0.39 -2.4 1,100,034 - B158DRAFT_1059 0.39 -1.4 1,100,155 + B158DRAFT_1059 0.49 -1.4 1,100,473 - B158DRAFT_1059 0.74 -1.5 1,100,531 + B158DRAFT_1059 0.79 -1.1 1,100,539 - B158DRAFT_1059 0.80 -2.0 1,100,544 - B158DRAFT_1059 0.80 -0.8
Or see this region's nucleotide sequence