Experiment: m.b. Vancomycin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0040 and B158DRAFT_0041 overlap by 35 nucleotides B158DRAFT_0041 and B158DRAFT_0042 are separated by 40 nucleotides B158DRAFT_0042 and B158DRAFT_0043 are separated by 3 nucleotides
B158DRAFT_0040: B158DRAFT_0040 - diguanylate cyclase (GGDEF) domain, at 39,907 to 41,715
_0040
B158DRAFT_0041: B158DRAFT_0041 - hypothetical protein, at 41,681 to 41,929
_0041
B158DRAFT_0042: B158DRAFT_0042 - Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain, at 41,970 to 42,707
_0042
B158DRAFT_0043: B158DRAFT_0043 - hypothetical protein, at 42,711 to 43,235
_0043
Position (kb)
41
42
43 Strain fitness (log2 ratio)
-1
0
1 at 40.995 kb on + strand, within B158DRAFT_0040 at 41.113 kb on + strand, within B158DRAFT_0040 at 41.283 kb on + strand, within B158DRAFT_0040 at 41.327 kb on + strand, within B158DRAFT_0040 at 41.370 kb on - strand, within B158DRAFT_0040 at 41.397 kb on - strand, within B158DRAFT_0040 at 41.397 kb on - strand, within B158DRAFT_0040 at 41.420 kb on - strand, within B158DRAFT_0040 at 41.558 kb on - strand at 41.681 kb on - strand at 41.716 kb on + strand, within B158DRAFT_0041 at 41.724 kb on - strand, within B158DRAFT_0041 at 41.734 kb on - strand, within B158DRAFT_0041 at 41.748 kb on + strand, within B158DRAFT_0041 at 41.843 kb on + strand, within B158DRAFT_0041 at 41.851 kb on - strand, within B158DRAFT_0041 at 41.851 kb on - strand, within B158DRAFT_0041 at 41.878 kb on + strand, within B158DRAFT_0041 at 41.886 kb on - strand, within B158DRAFT_0041 at 41.886 kb on - strand, within B158DRAFT_0041 at 41.891 kb on - strand, within B158DRAFT_0041 at 41.946 kb on - strand at 42.223 kb on - strand, within B158DRAFT_0042 at 42.253 kb on + strand, within B158DRAFT_0042 at 42.283 kb on + strand, within B158DRAFT_0042 at 42.511 kb on + strand, within B158DRAFT_0042 at 42.519 kb on - strand, within B158DRAFT_0042 at 42.521 kb on + strand, within B158DRAFT_0042 at 42.529 kb on - strand, within B158DRAFT_0042 at 42.529 kb on - strand, within B158DRAFT_0042 at 42.561 kb on - strand, within B158DRAFT_0042 at 42.563 kb on + strand, within B158DRAFT_0042 at 42.571 kb on - strand, within B158DRAFT_0042 at 42.571 kb on - strand, within B158DRAFT_0042 at 42.586 kb on - strand, within B158DRAFT_0042 at 42.656 kb on - strand at 42.656 kb on - strand at 43.041 kb on + strand, within B158DRAFT_0043 at 43.049 kb on - strand, within B158DRAFT_0043 at 43.057 kb on + strand, within B158DRAFT_0043 at 43.057 kb on + strand, within B158DRAFT_0043 at 43.057 kb on + strand, within B158DRAFT_0043 at 43.065 kb on - strand, within B158DRAFT_0043 at 43.433 kb on - strand at 43.435 kb on + strand at 43.614 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.125 mg/ml remove 40,995 + B158DRAFT_0040 0.60 +0.1 41,113 + B158DRAFT_0040 0.67 -0.5 41,283 + B158DRAFT_0040 0.76 -0.3 41,327 + B158DRAFT_0040 0.78 -0.4 41,370 - B158DRAFT_0040 0.81 -0.1 41,397 - B158DRAFT_0040 0.82 +0.5 41,397 - B158DRAFT_0040 0.82 -0.4 41,420 - B158DRAFT_0040 0.84 -0.0 41,558 - -0.2 41,681 - -0.2 41,716 + B158DRAFT_0041 0.14 +0.2 41,724 - B158DRAFT_0041 0.17 -0.2 41,734 - B158DRAFT_0041 0.21 -0.3 41,748 + B158DRAFT_0041 0.27 +0.2 41,843 + B158DRAFT_0041 0.65 +0.2 41,851 - B158DRAFT_0041 0.68 -0.2 41,851 - B158DRAFT_0041 0.68 +0.6 41,878 + B158DRAFT_0041 0.79 +0.3 41,886 - B158DRAFT_0041 0.82 -0.4 41,886 - B158DRAFT_0041 0.82 +0.1 41,891 - B158DRAFT_0041 0.84 -0.0 41,946 - -0.1 42,223 - B158DRAFT_0042 0.34 -0.4 42,253 + B158DRAFT_0042 0.38 -0.4 42,283 + B158DRAFT_0042 0.42 -0.0 42,511 + B158DRAFT_0042 0.73 -0.1 42,519 - B158DRAFT_0042 0.74 -0.1 42,521 + B158DRAFT_0042 0.75 +0.2 42,529 - B158DRAFT_0042 0.76 -0.4 42,529 - B158DRAFT_0042 0.76 -0.4 42,561 - B158DRAFT_0042 0.80 -0.1 42,563 + B158DRAFT_0042 0.80 -0.2 42,571 - B158DRAFT_0042 0.81 -0.1 42,571 - B158DRAFT_0042 0.81 -0.4 42,586 - B158DRAFT_0042 0.83 +0.1 42,656 - -0.8 42,656 - -0.7 43,041 + B158DRAFT_0043 0.63 -0.3 43,049 - B158DRAFT_0043 0.64 -0.2 43,057 + B158DRAFT_0043 0.66 +0.0 43,057 + B158DRAFT_0043 0.66 -0.3 43,057 + B158DRAFT_0043 0.66 -0.4 43,065 - B158DRAFT_0043 0.67 +0.1 43,433 - -1.0 43,435 + -0.3 43,614 - -0.3
Or see this region's nucleotide sequence