Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_739 and PfGW456L13_740 are separated by 174 nucleotides PfGW456L13_740 and PfGW456L13_741 are separated by 167 nucleotides
PfGW456L13_739 - Transcriptional regulator, AraC family, at 841,902 to 842,894
_739
PfGW456L13_740 - L-asparaginase (EC 3.5.1.1) <small>(from data)</small>, at 843,069 to 844,073
_740
PfGW456L13_741 - sodium/alanine transporter, at 844,241 to 845,692
_741
Position (kb) 843
844
845 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 842.071 kb on + strand, within PfGW456L13_739 at 842.072 kb on - strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.851 kb on - strand at 842.894 kb on + strand at 842.916 kb on - strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.937 kb on - strand at 842.937 kb on - strand at 842.957 kb on + strand at 842.957 kb on + strand at 842.958 kb on - strand at 842.958 kb on - strand at 843.051 kb on + strand at 843.051 kb on + strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.355 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.682 kb on - strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.857 kb on - strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.947 kb on - strand, within PfGW456L13_740 at 843.947 kb on - strand, within PfGW456L13_740 at 844.007 kb on + strand at 844.027 kb on + strand at 844.027 kb on + strand at 844.027 kb on + strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.057 kb on + strand at 844.057 kb on + strand at 844.058 kb on - strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.202 kb on + strand at 844.235 kb on + strand at 844.235 kb on + strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.260 kb on - strand at 844.398 kb on + strand, within PfGW456L13_741 at 844.398 kb on + strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.542 kb on - strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.933 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 842,071 + PfGW456L13_739 0.17 +0.1 842,072 - PfGW456L13_739 0.17 +0.0 842,368 + PfGW456L13_739 0.47 +0.6 842,368 + PfGW456L13_739 0.47 +0.3 842,368 + PfGW456L13_739 0.47 -1.1 842,368 + PfGW456L13_739 0.47 -1.1 842,368 + PfGW456L13_739 0.47 -0.5 842,368 + PfGW456L13_739 0.47 +1.1 842,369 - PfGW456L13_739 0.47 -0.3 842,369 - PfGW456L13_739 0.47 +0.6 842,369 - PfGW456L13_739 0.47 -0.7 842,851 - +1.0 842,894 + -0.6 842,916 - +0.2 842,934 + -0.5 842,934 + +0.5 842,934 + -0.5 842,934 + +1.4 842,934 + -1.0 842,934 + -0.9 842,934 + +0.5 842,934 + -0.0 842,934 + -0.7 842,934 + +0.3 842,935 - -3.1 842,935 - +0.7 842,935 - -0.1 842,935 - -1.2 842,935 - -0.9 842,935 - -2.1 842,935 - +0.1 842,935 - -1.2 842,935 - -1.5 842,935 - -0.6 842,935 - -0.2 842,936 + +0.8 842,936 + +0.6 842,936 + -0.4 842,937 - +0.9 842,937 - -1.7 842,957 + +0.8 842,957 + +0.1 842,958 - +0.4 842,958 - -0.5 843,051 + -0.0 843,051 + -0.2 843,052 - -0.2 843,052 - +1.4 843,052 - +0.6 843,229 + PfGW456L13_740 0.16 +0.3 843,229 + PfGW456L13_740 0.16 -0.5 843,229 + PfGW456L13_740 0.16 +0.2 843,229 + PfGW456L13_740 0.16 +0.0 843,229 + PfGW456L13_740 0.16 -0.2 843,230 - PfGW456L13_740 0.16 -0.6 843,230 - PfGW456L13_740 0.16 -0.9 843,355 + PfGW456L13_740 0.28 +1.1 843,472 + PfGW456L13_740 0.40 -0.9 843,472 + PfGW456L13_740 0.40 +1.1 843,472 + PfGW456L13_740 0.40 +1.4 843,473 - PfGW456L13_740 0.40 +0.8 843,473 - PfGW456L13_740 0.40 +0.2 843,473 - PfGW456L13_740 0.40 -0.4 843,473 - PfGW456L13_740 0.40 -0.3 843,601 + PfGW456L13_740 0.53 +0.8 843,601 + PfGW456L13_740 0.53 +0.6 843,601 + PfGW456L13_740 0.53 +1.9 843,601 + PfGW456L13_740 0.53 -1.6 843,601 + PfGW456L13_740 0.53 -1.7 843,602 - PfGW456L13_740 0.53 -2.7 843,602 - PfGW456L13_740 0.53 -0.7 843,602 - PfGW456L13_740 0.53 -0.8 843,602 - PfGW456L13_740 0.53 +0.1 843,602 - PfGW456L13_740 0.53 -1.3 843,602 - PfGW456L13_740 0.53 -0.6 843,602 - PfGW456L13_740 0.53 -0.1 843,682 - PfGW456L13_740 0.61 +0.1 843,763 + PfGW456L13_740 0.69 -0.1 843,763 + PfGW456L13_740 0.69 -0.3 843,856 + PfGW456L13_740 0.78 -0.0 843,856 + PfGW456L13_740 0.78 -0.0 843,856 + PfGW456L13_740 0.78 +0.1 843,857 - PfGW456L13_740 0.78 +0.8 843,946 + PfGW456L13_740 0.87 +0.4 843,946 + PfGW456L13_740 0.87 +0.3 843,946 + PfGW456L13_740 0.87 +0.2 843,947 - PfGW456L13_740 0.87 +0.0 843,947 - PfGW456L13_740 0.87 +2.1 844,007 + +0.4 844,027 + -0.4 844,027 + +0.6 844,027 + +0.2 844,028 - +1.2 844,028 - -0.4 844,028 - -0.3 844,028 - +0.1 844,057 + -0.0 844,057 + +0.3 844,058 - +1.6 844,129 + -0.3 844,129 + +0.9 844,129 + -0.2 844,129 + -0.9 844,129 + +0.1 844,129 + +0.1 844,129 + +1.0 844,129 + +0.3 844,130 - +0.4 844,130 - -0.2 844,130 - +0.8 844,130 - -0.3 844,130 - +0.5 844,130 - +0.9 844,130 - +0.3 844,130 - -0.7 844,130 - -0.1 844,144 + +1.2 844,144 + +0.1 844,144 + +0.6 844,144 + -0.7 844,144 + +0.6 844,145 - +0.0 844,145 - -0.2 844,145 - -0.7 844,145 - +0.1 844,145 - -0.8 844,145 - -1.2 844,145 - -1.3 844,202 + +0.3 844,235 + -0.1 844,235 + -1.1 844,236 - -0.3 844,236 - +0.2 844,236 - +0.6 844,236 - -3.7 844,236 - +0.9 844,236 - -1.1 844,236 - -1.0 844,236 - -0.5 844,260 - -0.7 844,398 + PfGW456L13_741 0.11 +0.7 844,398 + PfGW456L13_741 0.11 +0.3 844,399 - PfGW456L13_741 0.11 -0.0 844,399 - PfGW456L13_741 0.11 +1.1 844,399 - PfGW456L13_741 0.11 -0.3 844,399 - PfGW456L13_741 0.11 -0.1 844,542 - PfGW456L13_741 0.21 -0.3 844,614 + PfGW456L13_741 0.26 -0.2 844,614 + PfGW456L13_741 0.26 +0.8 844,614 + PfGW456L13_741 0.26 -0.1 844,615 - PfGW456L13_741 0.26 +0.3 844,615 - PfGW456L13_741 0.26 +0.2 844,615 - PfGW456L13_741 0.26 -0.2 844,615 - PfGW456L13_741 0.26 +1.5 844,615 - PfGW456L13_741 0.26 -0.5 844,617 + PfGW456L13_741 0.26 -0.0 844,617 + PfGW456L13_741 0.26 -0.7 844,617 + PfGW456L13_741 0.26 -0.8 844,617 + PfGW456L13_741 0.26 -0.6 844,617 + PfGW456L13_741 0.26 +0.1 844,617 + PfGW456L13_741 0.26 -0.3 844,617 + PfGW456L13_741 0.26 +0.1 844,617 + PfGW456L13_741 0.26 -2.0 844,617 + PfGW456L13_741 0.26 -0.1 844,617 + PfGW456L13_741 0.26 +0.6 844,617 + PfGW456L13_741 0.26 -0.3 844,617 + PfGW456L13_741 0.26 -0.6 844,617 + PfGW456L13_741 0.26 -0.0 844,617 + PfGW456L13_741 0.26 +1.5 844,617 + PfGW456L13_741 0.26 +0.2 844,617 + PfGW456L13_741 0.26 +0.3 844,617 + PfGW456L13_741 0.26 +0.8 844,617 + PfGW456L13_741 0.26 -0.1 844,617 + PfGW456L13_741 0.26 +0.2 844,617 + PfGW456L13_741 0.26 -0.1 844,618 - PfGW456L13_741 0.26 +0.4 844,618 - PfGW456L13_741 0.26 -0.1 844,618 - PfGW456L13_741 0.26 -0.1 844,618 - +0.1 844,618 - PfGW456L13_741 0.26 +0.3 844,618 - PfGW456L13_741 0.26 +0.1 844,618 - PfGW456L13_741 0.26 -0.5 844,618 - PfGW456L13_741 0.26 +0.3 844,618 - PfGW456L13_741 0.26 -0.1 844,618 - PfGW456L13_741 0.26 +1.9 844,618 - PfGW456L13_741 0.26 -0.0 844,618 - PfGW456L13_741 0.26 -0.0 844,618 - PfGW456L13_741 0.26 -0.1 844,618 - PfGW456L13_741 0.26 -0.0 844,749 + PfGW456L13_741 0.35 -0.1 844,749 + PfGW456L13_741 0.35 +0.7 844,749 + PfGW456L13_741 0.35 +0.0 844,749 + PfGW456L13_741 0.35 -0.1 844,933 + PfGW456L13_741 0.48 -0.9 845,030 + PfGW456L13_741 0.54 -0.9 845,030 + PfGW456L13_741 0.54 +0.5 845,030 + PfGW456L13_741 0.54 +0.9 845,031 - PfGW456L13_741 0.54 -0.7 845,031 - PfGW456L13_741 0.54 -0.3 845,031 - PfGW456L13_741 0.54 -0.5 845,031 - PfGW456L13_741 0.54 +0.0 845,040 + PfGW456L13_741 0.55 -1.3 845,040 + PfGW456L13_741 0.55 -0.0 845,040 + PfGW456L13_741 0.55 -0.4 845,040 + PfGW456L13_741 0.55 -0.6 845,040 + PfGW456L13_741 0.55 +0.8 845,040 + PfGW456L13_741 0.55 +0.3 845,041 - PfGW456L13_741 0.55 -0.7 845,041 - PfGW456L13_741 0.55 +0.7 845,041 - PfGW456L13_741 0.55 +0.6 845,041 - PfGW456L13_741 0.55 -0.7 845,041 - PfGW456L13_741 0.55 -0.5 845,041 - PfGW456L13_741 0.55 +0.6 845,041 - PfGW456L13_741 0.55 -0.5 845,041 - PfGW456L13_741 0.55 +0.5 845,041 - PfGW456L13_741 0.55 -0.7 845,041 - PfGW456L13_741 0.55 +0.0 845,041 - PfGW456L13_741 0.55 +0.1 845,058 + PfGW456L13_741 0.56 +0.1 845,058 + PfGW456L13_741 0.56 -0.5 845,058 + PfGW456L13_741 0.56 -0.1 845,058 + PfGW456L13_741 0.56 -0.7 845,058 + PfGW456L13_741 0.56 -0.2 845,058 + PfGW456L13_741 0.56 +0.5 845,058 + PfGW456L13_741 0.56 +0.2 845,058 + PfGW456L13_741 0.56 -0.3 845,058 + PfGW456L13_741 0.56 +0.3 845,059 - PfGW456L13_741 0.56 +0.1 845,059 - PfGW456L13_741 0.56 -0.7 845,059 - PfGW456L13_741 0.56 +0.2 845,059 - PfGW456L13_741 0.56 +0.6 845,059 - PfGW456L13_741 0.56 +1.1
Or see this region's nucleotide sequence