Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4750
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,293,124 | - | -0.7 | |||
5,294,421 | + | -3.0 | |||
5,294,421 | + | -0.4 | |||
5,294,422 | - | -0.4 | |||
5,294,422 | - | -2.3 | |||
5,294,463 | + | -0.0 | |||
5,294,472 | - | +1.1 | |||
5,294,472 | - | +0.5 | |||
5,294,635 | + | PfGW456L13_4751 | 0.10 | +1.2 | |
5,294,635 | + | PfGW456L13_4751 | 0.10 | -0.4 | |
5,294,635 | + | PfGW456L13_4751 | 0.10 | -2.0 | |
5,294,636 | - | PfGW456L13_4751 | 0.10 | +1.6 | |
5,294,636 | - | PfGW456L13_4751 | 0.10 | -0.4 | |
5,294,686 | + | PfGW456L13_4751 | 0.15 | -0.5 | |
5,294,687 | - | PfGW456L13_4751 | 0.16 | -1.8 | |
5,294,895 | + | PfGW456L13_4751 | 0.36 | +0.2 | |
5,294,895 | + | PfGW456L13_4751 | 0.36 | -0.2 | |
5,294,896 | - | PfGW456L13_4751 | 0.36 | -0.2 | |
5,294,896 | - | PfGW456L13_4751 | 0.36 | +1.0 | |
5,294,896 | - | PfGW456L13_4751 | 0.36 | +0.7 | |
5,294,896 | - | PfGW456L13_4751 | 0.36 | -0.3 | |
5,294,907 | + | PfGW456L13_4751 | 0.38 | -0.1 | |
5,294,908 | - | PfGW456L13_4751 | 0.38 | +1.3 | |
5,294,979 | + | PfGW456L13_4751 | 0.45 | -0.7 | |
5,294,979 | + | PfGW456L13_4751 | 0.45 | -0.6 | |
5,294,979 | + | PfGW456L13_4751 | 0.45 | +0.3 | |
5,294,980 | - | PfGW456L13_4751 | 0.45 | -0.4 | |
5,294,980 | - | PfGW456L13_4751 | 0.45 | +0.9 |
Or see this region's nucleotide sequence