Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4109 and PfGW456L13_4110 are separated by 26 nucleotides PfGW456L13_4110 and PfGW456L13_4111 are separated by 120 nucleotides
PfGW456L13_4109 - Magnesium and cobalt transport protein CorA, at 4,620,887 to 4,621,882
_4109
PfGW456L13_4110 - Ribonuclease E inhibitor RraA, at 4,621,909 to 4,622,400
_4110
PfGW456L13_4111 - Esterase/lipase/thioesterase family protein, at 4,622,521 to 4,623,510
_4111
Position (kb)
4621
4622
4623 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4621.068 kb on + strand, within PfGW456L13_4109 at 4621.068 kb on + strand, within PfGW456L13_4109 at 4621.069 kb on - strand, within PfGW456L13_4109 at 4621.069 kb on - strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.331 kb on - strand, within PfGW456L13_4109 at 4621.333 kb on - strand, within PfGW456L13_4109 at 4621.419 kb on + strand, within PfGW456L13_4109 at 4621.419 kb on + strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.613 kb on + strand, within PfGW456L13_4109 at 4621.614 kb on - strand, within PfGW456L13_4109 at 4621.910 kb on + strand at 4621.910 kb on + strand at 4621.910 kb on + strand at 4621.911 kb on - strand at 4621.911 kb on - strand at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.971 kb on - strand, within PfGW456L13_4110 at 4621.971 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.210 kb on - strand, within PfGW456L13_4110 at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.414 kb on + strand at 4622.414 kb on + strand at 4622.415 kb on - strand at 4622.469 kb on + strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.849 kb on + strand, within PfGW456L13_4111 at 4622.963 kb on - strand, within PfGW456L13_4111 at 4622.988 kb on - strand, within PfGW456L13_4111 at 4622.988 kb on - strand, within PfGW456L13_4111 at 4622.988 kb on - strand, within PfGW456L13_4111 at 4623.006 kb on + strand, within PfGW456L13_4111 at 4623.007 kb on - strand, within PfGW456L13_4111 at 4623.047 kb on + strand, within PfGW456L13_4111 at 4623.048 kb on - strand, within PfGW456L13_4111 at 4623.075 kb on + strand, within PfGW456L13_4111 at 4623.076 kb on - strand, within PfGW456L13_4111 at 4623.076 kb on - strand, within PfGW456L13_4111 at 4623.076 kb on - strand, within PfGW456L13_4111 at 4623.076 kb on - strand, within PfGW456L13_4111 at 4623.158 kb on + strand, within PfGW456L13_4111 at 4623.159 kb on - strand, within PfGW456L13_4111 at 4623.168 kb on - strand, within PfGW456L13_4111 at 4623.266 kb on + strand, within PfGW456L13_4111 at 4623.267 kb on - strand, within PfGW456L13_4111 at 4623.267 kb on - strand, within PfGW456L13_4111
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 4,621,068 + PfGW456L13_4109 0.18 -1.8 4,621,068 + PfGW456L13_4109 0.18 -2.2 4,621,069 - PfGW456L13_4109 0.18 +0.9 4,621,069 - PfGW456L13_4109 0.18 +0.8 4,621,330 + PfGW456L13_4109 0.44 -0.7 4,621,330 + PfGW456L13_4109 0.44 -0.5 4,621,330 + PfGW456L13_4109 0.44 +0.8 4,621,331 - PfGW456L13_4109 0.45 -0.8 4,621,333 - PfGW456L13_4109 0.45 +1.0 4,621,419 + PfGW456L13_4109 0.53 -1.0 4,621,419 + PfGW456L13_4109 0.53 -0.8 4,621,420 - PfGW456L13_4109 0.54 +0.4 4,621,420 - PfGW456L13_4109 0.54 +0.1 4,621,420 - PfGW456L13_4109 0.54 +0.6 4,621,420 - PfGW456L13_4109 0.54 +0.1 4,621,613 + PfGW456L13_4109 0.73 -1.8 4,621,614 - PfGW456L13_4109 0.73 -0.6 4,621,910 + -1.6 4,621,910 + -0.5 4,621,910 + -0.5 4,621,911 - +1.1 4,621,911 - -0.2 4,621,964 + PfGW456L13_4110 0.11 -0.0 4,621,964 + PfGW456L13_4110 0.11 -0.6 4,621,964 + PfGW456L13_4110 0.11 -2.4 4,621,965 - PfGW456L13_4110 0.11 +1.0 4,621,965 - PfGW456L13_4110 0.11 -1.2 4,621,965 - PfGW456L13_4110 0.11 +0.2 4,621,971 - PfGW456L13_4110 0.13 -0.3 4,621,971 - PfGW456L13_4110 0.13 -0.7 4,622,121 - PfGW456L13_4110 0.43 -0.6 4,622,121 - PfGW456L13_4110 0.43 +0.1 4,622,121 - PfGW456L13_4110 0.43 -0.2 4,622,121 - PfGW456L13_4110 0.43 -1.4 4,622,121 - PfGW456L13_4110 0.43 -0.2 4,622,121 - PfGW456L13_4110 0.43 -0.9 4,622,210 - PfGW456L13_4110 0.61 -1.6 4,622,390 + -2.7 4,622,390 + -0.8 4,622,390 + -1.2 4,622,390 + -1.8 4,622,391 - -0.7 4,622,391 - -0.6 4,622,391 - -0.4 4,622,391 - -0.7 4,622,391 - -0.4 4,622,391 - -0.1 4,622,391 - +0.3 4,622,391 - +0.8 4,622,391 - +0.0 4,622,414 + -1.0 4,622,414 + -3.0 4,622,415 - -0.0 4,622,469 + -1.6 4,622,470 - -1.2 4,622,470 - +0.3 4,622,470 - -0.5 4,622,470 - -0.5 4,622,470 - +0.7 4,622,849 + PfGW456L13_4111 0.33 +0.8 4,622,963 - PfGW456L13_4111 0.45 +0.4 4,622,988 - PfGW456L13_4111 0.47 +0.3 4,622,988 - PfGW456L13_4111 0.47 +1.8 4,622,988 - PfGW456L13_4111 0.47 +1.2 4,623,006 + PfGW456L13_4111 0.49 +0.8 4,623,007 - PfGW456L13_4111 0.49 -0.6 4,623,047 + PfGW456L13_4111 0.53 -0.8 4,623,048 - PfGW456L13_4111 0.53 +0.3 4,623,075 + PfGW456L13_4111 0.56 -1.8 4,623,076 - PfGW456L13_4111 0.56 +0.0 4,623,076 - PfGW456L13_4111 0.56 -0.2 4,623,076 - PfGW456L13_4111 0.56 -0.5 4,623,076 - PfGW456L13_4111 0.56 -0.7 4,623,158 + PfGW456L13_4111 0.64 -0.7 4,623,159 - PfGW456L13_4111 0.64 +1.2 4,623,168 - PfGW456L13_4111 0.65 +0.1 4,623,266 + PfGW456L13_4111 0.75 -1.6 4,623,267 - PfGW456L13_4111 0.75 -2.4 4,623,267 - PfGW456L13_4111 0.75 +0.5
Or see this region's nucleotide sequence