Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2955 and PfGW456L13_2956 are separated by 293 nucleotides PfGW456L13_2956 and PfGW456L13_2957 are separated by 4 nucleotides
PfGW456L13_2955 - RND efflux system, membrane fusion protein CmeA, at 3,298,195 to 3,299,352
_2955
PfGW456L13_2956 - Transcriptional regulatory protein RstA, at 3,299,646 to 3,300,347
_2956
PfGW456L13_2957 - Sensory histidine kinase QseC, at 3,300,352 to 3,301,653
_2957
Position (kb)
3299
3300
3301 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3298.848 kb on - strand, within PfGW456L13_2955 at 3298.938 kb on - strand, within PfGW456L13_2955 at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.354 kb on + strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.355 kb on - strand at 3299.357 kb on + strand at 3299.366 kb on - strand at 3299.366 kb on - strand at 3299.366 kb on - strand at 3299.383 kb on + strand at 3299.384 kb on - strand at 3299.440 kb on - strand at 3299.449 kb on - strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.470 kb on + strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.471 kb on - strand at 3299.472 kb on + strand at 3299.473 kb on - strand at 3299.493 kb on + strand at 3299.505 kb on + strand at 3299.505 kb on + strand at 3299.612 kb on + strand at 3299.612 kb on + strand at 3299.612 kb on + strand at 3299.721 kb on + strand, within PfGW456L13_2956 at 3299.722 kb on - strand, within PfGW456L13_2956 at 3299.940 kb on + strand at 3299.941 kb on - strand, within PfGW456L13_2956 at 3299.941 kb on - strand, within PfGW456L13_2956 at 3299.941 kb on - strand, within PfGW456L13_2956 at 3300.123 kb on + strand, within PfGW456L13_2956 at 3300.124 kb on - strand, within PfGW456L13_2956 at 3300.124 kb on - strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.166 kb on + strand, within PfGW456L13_2956 at 3300.167 kb on - strand, within PfGW456L13_2956 at 3300.167 kb on - strand, within PfGW456L13_2956 at 3300.167 kb on - strand, within PfGW456L13_2956 at 3300.167 kb on - strand, within PfGW456L13_2956 at 3300.315 kb on + strand at 3300.315 kb on + strand at 3300.315 kb on + strand at 3300.315 kb on + strand at 3300.376 kb on + strand at 3300.376 kb on + strand at 3300.377 kb on - strand at 3300.377 kb on - strand at 3300.377 kb on - strand at 3300.412 kb on + strand at 3300.412 kb on + strand at 3300.412 kb on + strand at 3300.412 kb on + strand at 3300.412 kb on + strand at 3300.413 kb on - strand at 3300.413 kb on - strand at 3300.463 kb on + strand at 3300.463 kb on + strand at 3300.463 kb on + strand at 3300.463 kb on + strand at 3300.463 kb on + strand at 3300.464 kb on - strand at 3300.464 kb on - strand at 3300.464 kb on - strand at 3300.766 kb on + strand, within PfGW456L13_2957 at 3300.767 kb on - strand, within PfGW456L13_2957 at 3301.163 kb on - strand, within PfGW456L13_2957
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 3,298,848 - PfGW456L13_2955 0.56 +1.0 3,298,938 - PfGW456L13_2955 0.64 +1.2 3,299,354 + -1.1 3,299,354 + -1.3 3,299,354 + +0.3 3,299,354 + +0.3 3,299,354 + +0.0 3,299,354 + -1.6 3,299,354 + -0.7 3,299,354 + +0.4 3,299,354 + +0.7 3,299,354 + +0.6 3,299,354 + -1.9 3,299,354 + -1.7 3,299,354 + +0.1 3,299,354 + +0.1 3,299,354 + +0.7 3,299,354 + -1.2 3,299,354 + -0.1 3,299,354 + -1.0 3,299,354 + +1.3 3,299,354 + +1.1 3,299,354 + +0.2 3,299,354 + +0.4 3,299,354 + +0.7 3,299,354 + -0.1 3,299,354 + +0.2 3,299,354 + +0.3 3,299,354 + -0.3 3,299,354 + +0.1 3,299,354 + +0.3 3,299,355 - +0.0 3,299,355 - +0.1 3,299,355 - +0.4 3,299,355 - +1.1 3,299,355 - +0.0 3,299,355 - +0.5 3,299,355 - +0.6 3,299,355 - +0.1 3,299,355 - -0.8 3,299,355 - -0.3 3,299,355 - -0.7 3,299,355 - +0.2 3,299,355 - -2.3 3,299,355 - +0.5 3,299,355 - +0.5 3,299,355 - -1.3 3,299,355 - -0.3 3,299,355 - +1.7 3,299,355 - +0.5 3,299,355 - -0.2 3,299,355 - -0.0 3,299,355 - -0.5 3,299,355 - +0.3 3,299,355 - -0.8 3,299,355 - -0.3 3,299,355 - +1.9 3,299,355 - +0.1 3,299,355 - +1.3 3,299,355 - -0.3 3,299,355 - +0.2 3,299,355 - -0.1 3,299,355 - +1.3 3,299,357 + -1.2 3,299,366 - +0.9 3,299,366 - +0.7 3,299,366 - -0.2 3,299,383 + +0.3 3,299,384 - -0.3 3,299,440 - -0.3 3,299,449 - +1.0 3,299,470 + -0.9 3,299,470 + -1.6 3,299,470 + -1.3 3,299,470 + -0.0 3,299,470 + -0.7 3,299,470 + +0.3 3,299,470 + +3.0 3,299,471 - -1.7 3,299,471 - -0.7 3,299,471 - -0.8 3,299,471 - -0.6 3,299,471 - +0.8 3,299,471 - -1.2 3,299,471 - -0.1 3,299,471 - -0.9 3,299,471 - -1.1 3,299,471 - -0.5 3,299,471 - +2.0 3,299,472 + +0.3 3,299,473 - +0.2 3,299,493 + -0.6 3,299,505 + -1.1 3,299,505 + -0.6 3,299,612 + +0.3 3,299,612 + +0.9 3,299,612 + +0.6 3,299,721 + PfGW456L13_2956 0.11 -2.5 3,299,722 - PfGW456L13_2956 0.11 -3.2 3,299,940 + -0.9 3,299,941 - PfGW456L13_2956 0.42 -3.0 3,299,941 - PfGW456L13_2956 0.42 -1.7 3,299,941 - PfGW456L13_2956 0.42 -2.3 3,300,123 + PfGW456L13_2956 0.68 -0.7 3,300,124 - PfGW456L13_2956 0.68 -0.2 3,300,124 - PfGW456L13_2956 0.68 -1.1 3,300,166 + PfGW456L13_2956 0.74 -1.4 3,300,166 + PfGW456L13_2956 0.74 -0.9 3,300,166 + PfGW456L13_2956 0.74 -2.5 3,300,166 + PfGW456L13_2956 0.74 -1.3 3,300,166 + PfGW456L13_2956 0.74 -1.9 3,300,166 + PfGW456L13_2956 0.74 -3.1 3,300,167 - PfGW456L13_2956 0.74 -2.7 3,300,167 - PfGW456L13_2956 0.74 -1.7 3,300,167 - PfGW456L13_2956 0.74 -2.8 3,300,167 - PfGW456L13_2956 0.74 -0.9 3,300,315 + -2.2 3,300,315 + -2.0 3,300,315 + -2.0 3,300,315 + -2.1 3,300,376 + -0.8 3,300,376 + -2.2 3,300,377 - -1.8 3,300,377 - -1.7 3,300,377 - -0.9 3,300,412 + -0.5 3,300,412 + -2.5 3,300,412 + -3.1 3,300,412 + -2.7 3,300,412 + -3.5 3,300,413 - +1.7 3,300,413 - +0.3 3,300,463 + -1.8 3,300,463 + -1.5 3,300,463 + +0.5 3,300,463 + -1.3 3,300,463 + -2.1 3,300,464 - -1.4 3,300,464 - +0.1 3,300,464 - -0.1 3,300,766 + PfGW456L13_2957 0.32 +0.9 3,300,767 - PfGW456L13_2957 0.32 -2.5 3,301,163 - PfGW456L13_2957 0.62 -2.6
Or see this region's nucleotide sequence