Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2639 and PfGW456L13_2640 are separated by 59 nucleotides PfGW456L13_2640 and PfGW456L13_2641 are separated by 215 nucleotides
PfGW456L13_2639 - tRNA-specific 2-thiouridylase MnmA, at 2,939,591 to 2,940,724
_2639
PfGW456L13_2640 - Nudix-like NDP and NTP phosphohydrolase YmfB, at 2,940,784 to 2,941,230
_2640
PfGW456L13_2641 - Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42), at 2,941,446 to 2,943,671
_2641
Position (kb)
2940
2941
2942 Strain fitness (log2 ratio)
-1
0
1
2 at 2940.725 kb on - strand at 2940.833 kb on + strand, within PfGW456L13_2640 at 2940.833 kb on + strand, within PfGW456L13_2640 at 2940.834 kb on - strand, within PfGW456L13_2640 at 2940.989 kb on + strand, within PfGW456L13_2640 at 2941.022 kb on + strand, within PfGW456L13_2640 at 2941.022 kb on + strand, within PfGW456L13_2640 at 2941.022 kb on + strand, within PfGW456L13_2640 at 2941.022 kb on + strand, within PfGW456L13_2640 at 2941.022 kb on + strand, within PfGW456L13_2640 at 2941.023 kb on - strand at 2941.023 kb on - strand, within PfGW456L13_2640 at 2941.033 kb on + strand, within PfGW456L13_2640 at 2941.230 kb on + strand at 2941.262 kb on + strand at 2941.263 kb on - strand at 2941.263 kb on - strand at 2941.269 kb on - strand at 2941.325 kb on + strand at 2941.325 kb on + strand at 2941.325 kb on + strand at 2941.325 kb on + strand at 2941.326 kb on - strand at 2941.326 kb on - strand at 2941.326 kb on - strand at 2941.326 kb on - strand at 2941.326 kb on - strand at 2941.327 kb on + strand at 2941.327 kb on + strand at 2941.327 kb on + strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.328 kb on - strand at 2941.334 kb on - strand at 2941.440 kb on - strand at 2941.440 kb on - strand at 2941.447 kb on + strand at 2941.448 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 2,940,725 - -1.3 2,940,833 + PfGW456L13_2640 0.11 +0.2 2,940,833 + PfGW456L13_2640 0.11 +0.6 2,940,834 - PfGW456L13_2640 0.11 -0.5 2,940,989 + PfGW456L13_2640 0.46 +0.9 2,941,022 + PfGW456L13_2640 0.53 -0.8 2,941,022 + PfGW456L13_2640 0.53 +1.0 2,941,022 + PfGW456L13_2640 0.53 -0.6 2,941,022 + PfGW456L13_2640 0.53 +0.4 2,941,022 + PfGW456L13_2640 0.53 +0.5 2,941,023 - +2.7 2,941,023 - PfGW456L13_2640 0.53 +1.7 2,941,033 + PfGW456L13_2640 0.56 -0.3 2,941,230 + +0.1 2,941,262 + +0.2 2,941,263 - -0.7 2,941,263 - -0.3 2,941,269 - +0.7 2,941,325 + +1.1 2,941,325 + -1.3 2,941,325 + -0.0 2,941,325 + +0.2 2,941,326 - -0.8 2,941,326 - -0.2 2,941,326 - +0.2 2,941,326 - -1.3 2,941,326 - -0.3 2,941,327 + +0.1 2,941,327 + -0.3 2,941,327 + +1.2 2,941,328 - -0.6 2,941,328 - +0.4 2,941,328 - +1.5 2,941,328 - -1.3 2,941,328 - -0.8 2,941,328 - -1.0 2,941,328 - -0.1 2,941,328 - +1.4 2,941,328 - -0.3 2,941,328 - -1.4 2,941,328 - +0.7 2,941,328 - +0.6 2,941,328 - +0.3 2,941,334 - -0.7 2,941,440 - +0.6 2,941,440 - +0.1 2,941,447 + -0.3 2,941,448 - +0.2
Or see this region's nucleotide sequence