Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2600

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
2,888,566	+		PfGW456L13_2599	0.60	+1.8
2,888,567	-		PfGW456L13_2599	0.60	-0.2
2,888,567	-		PfGW456L13_2599	0.60	+0.8
2,888,664	-		PfGW456L13_2599	0.72	+0.7
2,888,664	-		PfGW456L13_2599	0.72	+0.5
2,888,664	-		PfGW456L13_2599	0.72	-0.3
2,888,924	+				-0.8
2,888,924	+				+0.2
2,888,925	-				+1.3
2,888,995	-				+0.2
2,889,054	+				+0.9
2,889,054	+				-0.2
2,889,074	-				+0.1
2,889,074	-				+1.6
2,889,104	-				+0.0
2,889,104	-				+0.2
2,889,230	+		PfGW456L13_2600	0.12	-1.9
2,889,231	-		PfGW456L13_2600	0.12	-0.5
2,889,291	-		PfGW456L13_2600	0.21	-0.4
2,889,684	-		PfGW456L13_2600	0.82	+0.5
2,889,684	-		PfGW456L13_2600	0.82	+2.3
2,889,695	+		PfGW456L13_2600	0.83	-0.5
2,889,695	+		PfGW456L13_2600	0.83	+0.4
2,889,695	+		PfGW456L13_2600	0.83	+0.5
2,889,695	+		PfGW456L13_2600	0.83	-0.9
2,889,695	+		PfGW456L13_2600	0.83	+0.9
2,889,695	+		PfGW456L13_2600	0.83	-0.1
2,889,695	+		PfGW456L13_2600	0.83	-0.0
2,889,696	-		PfGW456L13_2600	0.84	-1.0
2,889,696	-		PfGW456L13_2600	0.84	+0.9
2,889,696	-		PfGW456L13_2600	0.84	-0.3
2,889,696	-		PfGW456L13_2600	0.84	+0.3
2,889,696	-		PfGW456L13_2600	0.84	+0.7
2,889,696	-		PfGW456L13_2600	0.84	+1.3
2,889,696	-		PfGW456L13_2600	0.84	-0.1
2,889,696	-		PfGW456L13_2600	0.84	+0.5
2,889,698	-		PfGW456L13_2600	0.84	-0.5
2,889,736	-		PfGW456L13_2600	0.90	+0.3
2,889,783	+				-0.5
2,889,783	+				+1.6
2,889,783	+				-0.6
2,889,783	+				+0.4
2,889,783	+				+2.7
2,889,784	-				-0.6
2,889,784	-				+0.6
2,889,784	-				+0.5
2,889,784	-				+0.7
2,889,784	-				+0.6
2,889,784	-				+0.3
2,889,784	-				-0.3
2,889,784	-				+0.2
2,889,784	-				-0.8
2,889,787	+				+1.4
2,889,787	+				+0.7
2,889,787	+				+0.4
2,889,787	+				+0.3
2,889,788	-				+0.3
2,889,788	-				+0.5
2,889,832	+				+1.8
2,889,833	-				+0.1
2,889,867	+				-0.2
2,889,868	-				-0.1
2,889,868	-				-0.4
2,889,868	-				+1.4
2,889,881	-				+0.5
2,889,881	-				+0.2
2,889,881	-				+1.0
2,889,901	+				+0.9
2,889,901	+				+0.6
2,889,902	-				+1.7
2,889,963	+				+0.5
2,889,964	-				+2.9
2,889,964	-				+1.2
2,889,964	-				+2.0
2,889,964	-				+1.7
2,889,964	-				-1.1
2,889,964	-				+1.1
2,890,000	+				+0.3
2,890,010	+				+2.1
2,890,010	+				+0.2
2,890,011	-				+0.3
2,890,011	-				+0.9
2,890,011	-				+0.7
2,890,011	-				-0.5
2,890,011	-				+1.0
2,890,106	+		PfGW456L13_2601	0.13	+0.7
2,890,106	+		PfGW456L13_2601	0.13	+1.6
2,890,109	+		PfGW456L13_2601	0.13	+1.3
2,890,301	+		PfGW456L13_2601	0.24	+3.2
2,890,424	+		PfGW456L13_2601	0.31	+0.6
2,890,424	+		PfGW456L13_2601	0.31	-0.3
2,890,425	-		PfGW456L13_2601	0.31	+1.0
2,890,425	-		PfGW456L13_2601	0.31	+0.7
2,890,425	-		PfGW456L13_2601	0.31	+0.7
2,890,425	-		PfGW456L13_2601	0.31	+1.1
2,890,425	-		PfGW456L13_2601	0.31	+1.3
2,890,442	+		PfGW456L13_2601	0.32	+0.1
2,890,442	+		PfGW456L13_2601	0.32	+0.1
2,890,442	+		PfGW456L13_2601	0.32	+1.3
2,890,443	-		PfGW456L13_2601	0.33	+0.4
2,890,443	-		PfGW456L13_2601	0.33	+0.3
2,890,443	-		PfGW456L13_2601	0.33	+0.9
2,890,444	+		PfGW456L13_2601	0.33	+0.9
2,890,444	+		PfGW456L13_2601	0.33	+0.7
2,890,444	+		PfGW456L13_2601	0.33	+0.3
2,890,444	+		PfGW456L13_2601	0.33	+0.0
2,890,444	+		PfGW456L13_2601	0.33	+0.9
2,890,445	-		PfGW456L13_2601	0.33	+0.5
2,890,445	-		PfGW456L13_2601	0.33	+2.0
2,890,445	-		PfGW456L13_2601	0.33	+1.7
2,890,445	-		PfGW456L13_2601	0.33	-0.1
2,890,445	-				+0.7
2,890,445	-		PfGW456L13_2601	0.33	+1.0
2,890,769	+		PfGW456L13_2601	0.51	+1.2
2,890,769	+		PfGW456L13_2601	0.51	+0.4
2,890,770	-		PfGW456L13_2601	0.51	+0.1
2,890,770	-		PfGW456L13_2601	0.51	+1.2
2,890,770	-		PfGW456L13_2601	0.51	+0.4