Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1749 and PfGW456L13_1750 are separated by 150 nucleotides
PfGW456L13_1749 - Argininosuccinate synthase (EC 6.3.4.5), at 1,926,046 to 1,927,263
_1749
PfGW456L13_1750 - hypothetical protein, at 1,927,414 to 1,927,656
_1750
Position (kb)
1927
1928 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1926.610 kb on + strand, within PfGW456L13_1749 at 1926.610 kb on + strand, within PfGW456L13_1749 at 1926.611 kb on - strand, within PfGW456L13_1749 at 1926.611 kb on - strand, within PfGW456L13_1749 at 1926.611 kb on - strand, within PfGW456L13_1749 at 1926.706 kb on + strand, within PfGW456L13_1749 at 1926.722 kb on - strand, within PfGW456L13_1749 at 1926.844 kb on + strand, within PfGW456L13_1749 at 1926.976 kb on + strand, within PfGW456L13_1749 at 1926.991 kb on + strand, within PfGW456L13_1749 at 1926.991 kb on + strand, within PfGW456L13_1749 at 1926.992 kb on - strand, within PfGW456L13_1749 at 1927.088 kb on - strand, within PfGW456L13_1749 at 1927.153 kb on - strand at 1927.177 kb on + strand at 1927.177 kb on + strand at 1927.286 kb on - strand at 1927.314 kb on + strand at 1927.315 kb on - strand at 1927.341 kb on + strand at 1927.341 kb on + strand at 1927.341 kb on + strand at 1927.341 kb on + strand at 1927.341 kb on + strand at 1927.341 kb on + strand at 1927.342 kb on - strand at 1927.342 kb on - strand at 1927.342 kb on - strand at 1927.379 kb on + strand at 1927.412 kb on + strand at 1927.412 kb on + strand at 1927.413 kb on - strand at 1927.413 kb on - strand at 1927.413 kb on - strand at 1927.415 kb on + strand at 1927.415 kb on + strand at 1927.415 kb on + strand at 1927.415 kb on + strand at 1927.416 kb on - strand at 1927.416 kb on - strand at 1927.416 kb on - strand at 1927.481 kb on + strand, within PfGW456L13_1750 at 1927.482 kb on - strand, within PfGW456L13_1750 at 1927.482 kb on - strand, within PfGW456L13_1750 at 1927.482 kb on - strand, within PfGW456L13_1750 at 1927.482 kb on - strand, within PfGW456L13_1750 at 1927.482 kb on - strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.490 kb on + strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.491 kb on - strand, within PfGW456L13_1750 at 1927.524 kb on + strand at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.525 kb on - strand, within PfGW456L13_1750 at 1927.550 kb on - strand, within PfGW456L13_1750 at 1927.589 kb on + strand, within PfGW456L13_1750 at 1927.589 kb on + strand, within PfGW456L13_1750 at 1927.590 kb on - strand, within PfGW456L13_1750 at 1927.663 kb on + strand at 1927.663 kb on + strand at 1927.664 kb on - strand at 1927.664 kb on - strand at 1927.664 kb on - strand at 1927.664 kb on - strand at 1927.664 kb on - strand at 1927.664 kb on - strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.676 kb on + strand at 1927.677 kb on - strand at 1927.677 kb on - strand at 1927.677 kb on - strand at 1927.677 kb on - strand at 1927.677 kb on - strand at 1927.677 kb on - strand at 1927.926 kb on + strand at 1927.928 kb on + strand at 1927.928 kb on + strand at 1927.929 kb on - strand at 1927.997 kb on + strand at 1927.997 kb on + strand at 1927.997 kb on + strand at 1927.998 kb on - strand at 1928.152 kb on + strand at 1928.389 kb on + strand at 1928.389 kb on + strand at 1928.443 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 1,926,610 + PfGW456L13_1749 0.46 -0.7 1,926,610 + PfGW456L13_1749 0.46 -2.3 1,926,611 - PfGW456L13_1749 0.46 -1.9 1,926,611 - PfGW456L13_1749 0.46 -2.4 1,926,611 - PfGW456L13_1749 0.46 -1.1 1,926,706 + PfGW456L13_1749 0.54 -2.8 1,926,722 - PfGW456L13_1749 0.56 -1.7 1,926,844 + PfGW456L13_1749 0.66 -3.0 1,926,976 + PfGW456L13_1749 0.76 -1.4 1,926,991 + PfGW456L13_1749 0.78 -1.4 1,926,991 + PfGW456L13_1749 0.78 -1.5 1,926,992 - PfGW456L13_1749 0.78 +1.9 1,927,088 - PfGW456L13_1749 0.86 -1.7 1,927,153 - -0.7 1,927,177 + -1.1 1,927,177 + -2.1 1,927,286 - -0.7 1,927,314 + +0.2 1,927,315 - +0.1 1,927,341 + -0.5 1,927,341 + -0.8 1,927,341 + -0.2 1,927,341 + -0.8 1,927,341 + -0.1 1,927,341 + +0.6 1,927,342 - +0.2 1,927,342 - +0.9 1,927,342 - +1.1 1,927,379 + +0.6 1,927,412 + -1.4 1,927,412 + -1.1 1,927,413 - -0.9 1,927,413 - -0.2 1,927,413 - -1.4 1,927,415 + -0.4 1,927,415 + +0.9 1,927,415 + -0.8 1,927,415 + -1.7 1,927,416 - +0.4 1,927,416 - +0.1 1,927,416 - +0.5 1,927,481 + PfGW456L13_1750 0.28 -0.1 1,927,482 - PfGW456L13_1750 0.28 -0.3 1,927,482 - PfGW456L13_1750 0.28 +1.5 1,927,482 - PfGW456L13_1750 0.28 +0.0 1,927,482 - PfGW456L13_1750 0.28 -0.1 1,927,482 - PfGW456L13_1750 0.28 -0.9 1,927,490 + PfGW456L13_1750 0.31 -2.8 1,927,490 + PfGW456L13_1750 0.31 +1.3 1,927,490 + PfGW456L13_1750 0.31 -0.7 1,927,490 + PfGW456L13_1750 0.31 +1.0 1,927,490 + PfGW456L13_1750 0.31 +1.6 1,927,490 + PfGW456L13_1750 0.31 -2.1 1,927,490 + PfGW456L13_1750 0.31 +0.5 1,927,490 + PfGW456L13_1750 0.31 -0.3 1,927,491 - PfGW456L13_1750 0.32 +0.0 1,927,491 - PfGW456L13_1750 0.32 +0.7 1,927,491 - PfGW456L13_1750 0.32 -0.9 1,927,491 - PfGW456L13_1750 0.32 -0.2 1,927,491 - PfGW456L13_1750 0.32 +0.6 1,927,491 - PfGW456L13_1750 0.32 -1.9 1,927,524 + -1.1 1,927,525 - PfGW456L13_1750 0.46 +0.5 1,927,525 - PfGW456L13_1750 0.46 +0.4 1,927,525 - PfGW456L13_1750 0.46 -0.3 1,927,525 - PfGW456L13_1750 0.46 -0.1 1,927,525 - PfGW456L13_1750 0.46 -1.2 1,927,525 - PfGW456L13_1750 0.46 +0.9 1,927,525 - PfGW456L13_1750 0.46 -0.0 1,927,525 - PfGW456L13_1750 0.46 -1.0 1,927,525 - PfGW456L13_1750 0.46 -0.1 1,927,550 - PfGW456L13_1750 0.56 -0.4 1,927,589 + PfGW456L13_1750 0.72 -0.5 1,927,589 + PfGW456L13_1750 0.72 +0.4 1,927,590 - PfGW456L13_1750 0.72 -0.8 1,927,663 + -0.3 1,927,663 + -1.1 1,927,664 - +0.8 1,927,664 - -0.9 1,927,664 - -2.2 1,927,664 - +1.4 1,927,664 - +0.0 1,927,664 - -0.7 1,927,676 + +1.7 1,927,676 + -0.1 1,927,676 + -0.6 1,927,676 + -0.7 1,927,676 + -0.6 1,927,676 + -0.8 1,927,676 + -0.1 1,927,677 - +0.1 1,927,677 - +0.7 1,927,677 - +0.2 1,927,677 - -0.7 1,927,677 - +0.4 1,927,677 - +1.7 1,927,926 + -1.5 1,927,928 + +0.3 1,927,928 + +1.1 1,927,929 - +1.4 1,927,997 + -2.0 1,927,997 + +0.8 1,927,997 + -0.6 1,927,998 - -0.5 1,928,152 + +0.0 1,928,389 + -0.4 1,928,389 + +0.3 1,928,443 + -1.3
Or see this region's nucleotide sequence