Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1407 and Echvi_1408 are separated by 290 nucleotides Echvi_1408 and Echvi_1409 overlap by 4 nucleotides
Echvi_1407: Echvi_1407 - hypothetical protein, at 1,622,990 to 1,623,766
_1407
Echvi_1408: Echvi_1408 - DNA adenine methylase (dam), at 1,624,057 to 1,624,908
_1408
Echvi_1409: Echvi_1409 - DGQHR domain, at 1,624,905 to 1,627,199
_1409
Position (kb)
1624
1625 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1623.060 kb on - strand at 1623.060 kb on - strand at 1623.060 kb on - strand at 1623.142 kb on - strand, within Echvi_1407 at 1623.142 kb on - strand, within Echvi_1407 at 1623.150 kb on - strand, within Echvi_1407 at 1623.150 kb on - strand, within Echvi_1407 at 1623.150 kb on - strand, within Echvi_1407 at 1623.150 kb on - strand, within Echvi_1407 at 1623.150 kb on - strand, within Echvi_1407 at 1623.156 kb on - strand, within Echvi_1407 at 1623.156 kb on - strand, within Echvi_1407 at 1623.156 kb on - strand, within Echvi_1407 at 1623.156 kb on - strand, within Echvi_1407 at 1623.182 kb on - strand, within Echvi_1407 at 1623.323 kb on - strand, within Echvi_1407 at 1623.336 kb on - strand, within Echvi_1407 at 1623.336 kb on - strand, within Echvi_1407 at 1623.340 kb on - strand, within Echvi_1407 at 1623.355 kb on - strand, within Echvi_1407 at 1623.366 kb on - strand, within Echvi_1407 at 1623.366 kb on - strand, within Echvi_1407 at 1623.368 kb on - strand, within Echvi_1407 at 1623.368 kb on - strand, within Echvi_1407 at 1623.368 kb on - strand, within Echvi_1407 at 1623.368 kb on - strand, within Echvi_1407 at 1623.385 kb on - strand, within Echvi_1407 at 1623.388 kb on - strand, within Echvi_1407 at 1623.403 kb on - strand, within Echvi_1407 at 1623.403 kb on - strand, within Echvi_1407 at 1623.439 kb on - strand, within Echvi_1407 at 1623.439 kb on - strand, within Echvi_1407 at 1623.444 kb on - strand, within Echvi_1407 at 1623.469 kb on - strand, within Echvi_1407 at 1623.471 kb on - strand, within Echvi_1407 at 1623.560 kb on - strand, within Echvi_1407 at 1623.560 kb on - strand, within Echvi_1407 at 1623.575 kb on - strand, within Echvi_1407 at 1623.635 kb on - strand, within Echvi_1407 at 1623.695 kb on - strand at 1623.748 kb on - strand at 1623.808 kb on - strand at 1623.808 kb on - strand at 1623.810 kb on - strand at 1623.810 kb on - strand at 1623.814 kb on - strand at 1623.814 kb on - strand at 1623.820 kb on - strand at 1623.820 kb on - strand at 1623.873 kb on - strand at 1623.963 kb on - strand at 1623.963 kb on - strand at 1623.963 kb on - strand at 1623.969 kb on - strand at 1624.036 kb on - strand at 1624.040 kb on - strand at 1624.068 kb on - strand at 1624.077 kb on - strand at 1624.080 kb on - strand at 1624.181 kb on - strand, within Echvi_1408 at 1624.195 kb on - strand, within Echvi_1408 at 1624.195 kb on - strand, within Echvi_1408 at 1624.220 kb on - strand, within Echvi_1408 at 1624.231 kb on - strand, within Echvi_1408 at 1624.243 kb on - strand, within Echvi_1408 at 1624.249 kb on - strand, within Echvi_1408 at 1624.256 kb on - strand, within Echvi_1408 at 1624.256 kb on - strand, within Echvi_1408 at 1624.256 kb on - strand, within Echvi_1408 at 1624.292 kb on - strand, within Echvi_1408 at 1624.297 kb on - strand, within Echvi_1408 at 1624.302 kb on - strand, within Echvi_1408 at 1624.478 kb on - strand, within Echvi_1408 at 1624.478 kb on - strand, within Echvi_1408 at 1624.515 kb on - strand, within Echvi_1408 at 1624.642 kb on - strand, within Echvi_1408 at 1624.759 kb on - strand, within Echvi_1408 at 1624.837 kb on - strand at 1624.925 kb on - strand at 1624.925 kb on - strand at 1624.929 kb on - strand at 1624.955 kb on + strand at 1624.956 kb on - strand at 1624.956 kb on - strand at 1624.966 kb on + strand at 1624.967 kb on - strand at 1624.967 kb on - strand at 1624.973 kb on + strand at 1624.987 kb on - strand at 1624.992 kb on + strand at 1624.992 kb on + strand at 1625.004 kb on - strand at 1625.017 kb on + strand at 1625.060 kb on + strand at 1625.073 kb on - strand at 1625.180 kb on - strand, within Echvi_1409 at 1625.210 kb on + strand, within Echvi_1409 at 1625.224 kb on + strand, within Echvi_1409 at 1625.224 kb on + strand, within Echvi_1409 at 1625.233 kb on + strand, within Echvi_1409 at 1625.234 kb on - strand, within Echvi_1409 at 1625.257 kb on + strand, within Echvi_1409 at 1625.308 kb on + strand, within Echvi_1409 at 1625.309 kb on - strand, within Echvi_1409 at 1625.336 kb on + strand, within Echvi_1409 at 1625.336 kb on + strand, within Echvi_1409 at 1625.336 kb on + strand, within Echvi_1409 at 1625.336 kb on + strand, within Echvi_1409 at 1625.336 kb on + strand, within Echvi_1409 at 1625.337 kb on - strand, within Echvi_1409 at 1625.337 kb on - strand, within Echvi_1409 at 1625.340 kb on - strand, within Echvi_1409 at 1625.340 kb on - strand, within Echvi_1409 at 1625.381 kb on - strand, within Echvi_1409 at 1625.381 kb on - strand, within Echvi_1409 at 1625.447 kb on + strand, within Echvi_1409 at 1625.448 kb on - strand, within Echvi_1409 at 1625.448 kb on - strand, within Echvi_1409 at 1625.448 kb on - strand, within Echvi_1409 at 1625.450 kb on + strand, within Echvi_1409 at 1625.451 kb on - strand, within Echvi_1409 at 1625.451 kb on - strand, within Echvi_1409 at 1625.451 kb on - strand, within Echvi_1409 at 1625.452 kb on + strand, within Echvi_1409 at 1625.453 kb on - strand, within Echvi_1409 at 1625.453 kb on - strand, within Echvi_1409 at 1625.453 kb on - strand, within Echvi_1409 at 1625.453 kb on - strand, within Echvi_1409 at 1625.474 kb on + strand, within Echvi_1409 at 1625.474 kb on + strand, within Echvi_1409 at 1625.477 kb on + strand, within Echvi_1409 at 1625.478 kb on - strand, within Echvi_1409 at 1625.611 kb on - strand, within Echvi_1409 at 1625.612 kb on + strand, within Echvi_1409 at 1625.612 kb on + strand, within Echvi_1409 at 1625.612 kb on + strand, within Echvi_1409 at 1625.612 kb on + strand, within Echvi_1409 at 1625.612 kb on + strand, within Echvi_1409 at 1625.613 kb on - strand, within Echvi_1409 at 1625.613 kb on - strand, within Echvi_1409 at 1625.613 kb on - strand, within Echvi_1409 at 1625.617 kb on - strand, within Echvi_1409 at 1625.617 kb on - strand, within Echvi_1409 at 1625.617 kb on - strand, within Echvi_1409 at 1625.617 kb on - strand, within Echvi_1409 at 1625.617 kb on - strand, within Echvi_1409 at 1625.642 kb on + strand, within Echvi_1409 at 1625.643 kb on - strand, within Echvi_1409 at 1625.657 kb on - strand, within Echvi_1409 at 1625.661 kb on + strand, within Echvi_1409 at 1625.662 kb on - strand, within Echvi_1409 at 1625.663 kb on + strand, within Echvi_1409 at 1625.663 kb on + strand, within Echvi_1409 at 1625.664 kb on - strand, within Echvi_1409 at 1625.664 kb on - strand, within Echvi_1409 at 1625.664 kb on - strand, within Echvi_1409 at 1625.698 kb on + strand, within Echvi_1409 at 1625.699 kb on - strand, within Echvi_1409 at 1625.706 kb on + strand, within Echvi_1409 at 1625.706 kb on + strand, within Echvi_1409 at 1625.706 kb on + strand, within Echvi_1409 at 1625.707 kb on - strand, within Echvi_1409 at 1625.755 kb on + strand, within Echvi_1409 at 1625.792 kb on - strand, within Echvi_1409 at 1625.792 kb on - strand, within Echvi_1409 at 1625.799 kb on - strand, within Echvi_1409 at 1625.878 kb on + strand, within Echvi_1409 at 1625.879 kb on - strand, within Echvi_1409
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,623,060 - -0.7 1,623,060 - +1.9 1,623,060 - +0.4 1,623,142 - Echvi_1407 0.20 -0.8 1,623,142 - Echvi_1407 0.20 +0.4 1,623,150 - Echvi_1407 0.21 -0.4 1,623,150 - Echvi_1407 0.21 +0.7 1,623,150 - Echvi_1407 0.21 +0.7 1,623,150 - Echvi_1407 0.21 +1.9 1,623,150 - Echvi_1407 0.21 +0.1 1,623,156 - Echvi_1407 0.21 +1.0 1,623,156 - Echvi_1407 0.21 +0.8 1,623,156 - Echvi_1407 0.21 -0.8 1,623,156 - Echvi_1407 0.21 -2.6 1,623,182 - Echvi_1407 0.25 -0.5 1,623,323 - Echvi_1407 0.43 -0.2 1,623,336 - Echvi_1407 0.45 -0.1 1,623,336 - Echvi_1407 0.45 -0.2 1,623,340 - Echvi_1407 0.45 -0.5 1,623,355 - Echvi_1407 0.47 -0.7 1,623,366 - Echvi_1407 0.48 -0.4 1,623,366 - Echvi_1407 0.48 +0.2 1,623,368 - Echvi_1407 0.49 -0.1 1,623,368 - Echvi_1407 0.49 -2.2 1,623,368 - Echvi_1407 0.49 -0.4 1,623,368 - Echvi_1407 0.49 +0.9 1,623,385 - Echvi_1407 0.51 +1.4 1,623,388 - Echvi_1407 0.51 -0.4 1,623,403 - Echvi_1407 0.53 -0.5 1,623,403 - Echvi_1407 0.53 +0.1 1,623,439 - Echvi_1407 0.58 -0.7 1,623,439 - Echvi_1407 0.58 +0.6 1,623,444 - Echvi_1407 0.58 +0.2 1,623,469 - Echvi_1407 0.62 -1.7 1,623,471 - Echvi_1407 0.62 -0.0 1,623,560 - Echvi_1407 0.73 +0.8 1,623,560 - Echvi_1407 0.73 +0.1 1,623,575 - Echvi_1407 0.75 -1.4 1,623,635 - Echvi_1407 0.83 +0.9 1,623,695 - -1.6 1,623,748 - +0.3 1,623,808 - -0.0 1,623,808 - -0.2 1,623,810 - +1.1 1,623,810 - +0.6 1,623,814 - -2.4 1,623,814 - -2.2 1,623,820 - +1.5 1,623,820 - +0.5 1,623,873 - +0.4 1,623,963 - -0.7 1,623,963 - +1.1 1,623,963 - -0.3 1,623,969 - +0.4 1,624,036 - +0.4 1,624,040 - +0.4 1,624,068 - -3.5 1,624,077 - +0.1 1,624,080 - -0.9 1,624,181 - Echvi_1408 0.15 +0.6 1,624,195 - Echvi_1408 0.16 +0.6 1,624,195 - Echvi_1408 0.16 +0.2 1,624,220 - Echvi_1408 0.19 -0.8 1,624,231 - Echvi_1408 0.20 +0.1 1,624,243 - Echvi_1408 0.22 +0.9 1,624,249 - Echvi_1408 0.23 -0.9 1,624,256 - Echvi_1408 0.23 +0.7 1,624,256 - Echvi_1408 0.23 +1.0 1,624,256 - Echvi_1408 0.23 -0.1 1,624,292 - Echvi_1408 0.28 +0.2 1,624,297 - Echvi_1408 0.28 +1.1 1,624,302 - Echvi_1408 0.29 +0.1 1,624,478 - Echvi_1408 0.49 +0.2 1,624,478 - Echvi_1408 0.49 +1.4 1,624,515 - Echvi_1408 0.54 +1.3 1,624,642 - Echvi_1408 0.69 -1.4 1,624,759 - Echvi_1408 0.82 +0.7 1,624,837 - -0.5 1,624,925 - -0.0 1,624,925 - -2.9 1,624,929 - +0.1 1,624,955 + +1.1 1,624,956 - -1.4 1,624,956 - -0.0 1,624,966 + -2.1 1,624,967 - -2.9 1,624,967 - -0.2 1,624,973 + -0.5 1,624,987 - -0.9 1,624,992 + +0.6 1,624,992 + -0.8 1,625,004 - -0.3 1,625,017 + +0.1 1,625,060 + -0.0 1,625,073 - +1.4 1,625,180 - Echvi_1409 0.12 -1.3 1,625,210 + Echvi_1409 0.13 +1.7 1,625,224 + Echvi_1409 0.14 -1.9 1,625,224 + Echvi_1409 0.14 -0.3 1,625,233 + Echvi_1409 0.14 +0.5 1,625,234 - Echvi_1409 0.14 +0.3 1,625,257 + Echvi_1409 0.15 +1.2 1,625,308 + Echvi_1409 0.18 +0.6 1,625,309 - Echvi_1409 0.18 -1.6 1,625,336 + Echvi_1409 0.19 +0.5 1,625,336 + Echvi_1409 0.19 -0.3 1,625,336 + Echvi_1409 0.19 +0.4 1,625,336 + Echvi_1409 0.19 +0.6 1,625,336 + Echvi_1409 0.19 +1.8 1,625,337 - Echvi_1409 0.19 +0.9 1,625,337 - Echvi_1409 0.19 +0.4 1,625,340 - Echvi_1409 0.19 -2.0 1,625,340 - Echvi_1409 0.19 +0.9 1,625,381 - Echvi_1409 0.21 -0.9 1,625,381 - Echvi_1409 0.21 -0.7 1,625,447 + Echvi_1409 0.24 -1.8 1,625,448 - Echvi_1409 0.24 -0.1 1,625,448 - Echvi_1409 0.24 +0.6 1,625,448 - Echvi_1409 0.24 -1.0 1,625,450 + Echvi_1409 0.24 -0.3 1,625,451 - Echvi_1409 0.24 -0.1 1,625,451 - Echvi_1409 0.24 +0.0 1,625,451 - Echvi_1409 0.24 +1.2 1,625,452 + Echvi_1409 0.24 +0.5 1,625,453 - Echvi_1409 0.24 +0.2 1,625,453 - Echvi_1409 0.24 +0.6 1,625,453 - Echvi_1409 0.24 +1.0 1,625,453 - Echvi_1409 0.24 +0.1 1,625,474 + Echvi_1409 0.25 +0.8 1,625,474 + Echvi_1409 0.25 +0.1 1,625,477 + Echvi_1409 0.25 +0.8 1,625,478 - Echvi_1409 0.25 -1.8 1,625,611 - Echvi_1409 0.31 -0.7 1,625,612 + Echvi_1409 0.31 +0.7 1,625,612 + Echvi_1409 0.31 +0.7 1,625,612 + Echvi_1409 0.31 -0.1 1,625,612 + Echvi_1409 0.31 -0.1 1,625,612 + Echvi_1409 0.31 -0.7 1,625,613 - Echvi_1409 0.31 +0.1 1,625,613 - Echvi_1409 0.31 +0.6 1,625,613 - Echvi_1409 0.31 -2.9 1,625,617 - Echvi_1409 0.31 +0.5 1,625,617 - Echvi_1409 0.31 -0.4 1,625,617 - Echvi_1409 0.31 +1.2 1,625,617 - Echvi_1409 0.31 +0.8 1,625,617 - Echvi_1409 0.31 -2.4 1,625,642 + Echvi_1409 0.32 +0.3 1,625,643 - Echvi_1409 0.32 +0.8 1,625,657 - Echvi_1409 0.33 +0.5 1,625,661 + Echvi_1409 0.33 +1.0 1,625,662 - Echvi_1409 0.33 -0.8 1,625,663 + Echvi_1409 0.33 -1.8 1,625,663 + Echvi_1409 0.33 +0.7 1,625,664 - Echvi_1409 0.33 +1.0 1,625,664 - Echvi_1409 0.33 -1.1 1,625,664 - Echvi_1409 0.33 +0.6 1,625,698 + Echvi_1409 0.35 +0.2 1,625,699 - Echvi_1409 0.35 +0.2 1,625,706 + Echvi_1409 0.35 -1.1 1,625,706 + Echvi_1409 0.35 +0.4 1,625,706 + Echvi_1409 0.35 -1.5 1,625,707 - Echvi_1409 0.35 +1.2 1,625,755 + Echvi_1409 0.37 +1.1 1,625,792 - Echvi_1409 0.39 +0.7 1,625,792 - Echvi_1409 0.39 -2.6 1,625,799 - Echvi_1409 0.39 +0.9 1,625,878 + Echvi_1409 0.42 -2.1 1,625,879 - Echvi_1409 0.42 +1.6
Or see this region's nucleotide sequence