Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1408

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1407 and Echvi_1408 are separated by 290 nucleotidesEchvi_1408 and Echvi_1409 overlap by 4 nucleotides Echvi_1407: Echvi_1407 - hypothetical protein, at 1,622,990 to 1,623,766 _1407 Echvi_1408: Echvi_1408 - DNA adenine methylase (dam), at 1,624,057 to 1,624,908 _1408 Echvi_1409: Echvi_1409 - DGQHR domain, at 1,624,905 to 1,627,199 _1409 Position (kb) 1624 1625Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1623.060 kb on - strandat 1623.060 kb on - strandat 1623.060 kb on - strandat 1623.142 kb on - strand, within Echvi_1407at 1623.142 kb on - strand, within Echvi_1407at 1623.150 kb on - strand, within Echvi_1407at 1623.150 kb on - strand, within Echvi_1407at 1623.150 kb on - strand, within Echvi_1407at 1623.150 kb on - strand, within Echvi_1407at 1623.150 kb on - strand, within Echvi_1407at 1623.156 kb on - strand, within Echvi_1407at 1623.156 kb on - strand, within Echvi_1407at 1623.156 kb on - strand, within Echvi_1407at 1623.156 kb on - strand, within Echvi_1407at 1623.182 kb on - strand, within Echvi_1407at 1623.323 kb on - strand, within Echvi_1407at 1623.336 kb on - strand, within Echvi_1407at 1623.336 kb on - strand, within Echvi_1407at 1623.340 kb on - strand, within Echvi_1407at 1623.355 kb on - strand, within Echvi_1407at 1623.366 kb on - strand, within Echvi_1407at 1623.366 kb on - strand, within Echvi_1407at 1623.368 kb on - strand, within Echvi_1407at 1623.368 kb on - strand, within Echvi_1407at 1623.368 kb on - strand, within Echvi_1407at 1623.368 kb on - strand, within Echvi_1407at 1623.385 kb on - strand, within Echvi_1407at 1623.388 kb on - strand, within Echvi_1407at 1623.403 kb on - strand, within Echvi_1407at 1623.403 kb on - strand, within Echvi_1407at 1623.439 kb on - strand, within Echvi_1407at 1623.439 kb on - strand, within Echvi_1407at 1623.444 kb on - strand, within Echvi_1407at 1623.469 kb on - strand, within Echvi_1407at 1623.471 kb on - strand, within Echvi_1407at 1623.560 kb on - strand, within Echvi_1407at 1623.560 kb on - strand, within Echvi_1407at 1623.575 kb on - strand, within Echvi_1407at 1623.635 kb on - strand, within Echvi_1407at 1623.695 kb on - strandat 1623.748 kb on - strandat 1623.808 kb on - strandat 1623.808 kb on - strandat 1623.810 kb on - strandat 1623.810 kb on - strandat 1623.814 kb on - strandat 1623.814 kb on - strandat 1623.820 kb on - strandat 1623.820 kb on - strandat 1623.873 kb on - strandat 1623.963 kb on - strandat 1623.963 kb on - strandat 1623.963 kb on - strandat 1623.969 kb on - strandat 1624.036 kb on - strandat 1624.040 kb on - strandat 1624.068 kb on - strandat 1624.077 kb on - strandat 1624.080 kb on - strandat 1624.181 kb on - strand, within Echvi_1408at 1624.195 kb on - strand, within Echvi_1408at 1624.195 kb on - strand, within Echvi_1408at 1624.220 kb on - strand, within Echvi_1408at 1624.231 kb on - strand, within Echvi_1408at 1624.243 kb on - strand, within Echvi_1408at 1624.249 kb on - strand, within Echvi_1408at 1624.256 kb on - strand, within Echvi_1408at 1624.256 kb on - strand, within Echvi_1408at 1624.256 kb on - strand, within Echvi_1408at 1624.292 kb on - strand, within Echvi_1408at 1624.297 kb on - strand, within Echvi_1408at 1624.302 kb on - strand, within Echvi_1408at 1624.478 kb on - strand, within Echvi_1408at 1624.478 kb on - strand, within Echvi_1408at 1624.515 kb on - strand, within Echvi_1408at 1624.642 kb on - strand, within Echvi_1408at 1624.759 kb on - strand, within Echvi_1408at 1624.837 kb on - strandat 1624.925 kb on - strandat 1624.925 kb on - strandat 1624.929 kb on - strandat 1624.955 kb on + strandat 1624.956 kb on - strandat 1624.956 kb on - strandat 1624.966 kb on + strandat 1624.967 kb on - strandat 1624.967 kb on - strandat 1624.973 kb on + strandat 1624.987 kb on - strandat 1624.992 kb on + strandat 1624.992 kb on + strandat 1625.004 kb on - strandat 1625.017 kb on + strandat 1625.060 kb on + strandat 1625.073 kb on - strandat 1625.180 kb on - strand, within Echvi_1409at 1625.210 kb on + strand, within Echvi_1409at 1625.224 kb on + strand, within Echvi_1409at 1625.224 kb on + strand, within Echvi_1409at 1625.233 kb on + strand, within Echvi_1409at 1625.234 kb on - strand, within Echvi_1409at 1625.257 kb on + strand, within Echvi_1409at 1625.308 kb on + strand, within Echvi_1409at 1625.309 kb on - strand, within Echvi_1409at 1625.336 kb on + strand, within Echvi_1409at 1625.336 kb on + strand, within Echvi_1409at 1625.336 kb on + strand, within Echvi_1409at 1625.336 kb on + strand, within Echvi_1409at 1625.336 kb on + strand, within Echvi_1409at 1625.337 kb on - strand, within Echvi_1409at 1625.337 kb on - strand, within Echvi_1409at 1625.340 kb on - strand, within Echvi_1409at 1625.340 kb on - strand, within Echvi_1409at 1625.381 kb on - strand, within Echvi_1409at 1625.381 kb on - strand, within Echvi_1409at 1625.447 kb on + strand, within Echvi_1409at 1625.448 kb on - strand, within Echvi_1409at 1625.448 kb on - strand, within Echvi_1409at 1625.448 kb on - strand, within Echvi_1409at 1625.450 kb on + strand, within Echvi_1409at 1625.451 kb on - strand, within Echvi_1409at 1625.451 kb on - strand, within Echvi_1409at 1625.451 kb on - strand, within Echvi_1409at 1625.452 kb on + strand, within Echvi_1409at 1625.453 kb on - strand, within Echvi_1409at 1625.453 kb on - strand, within Echvi_1409at 1625.453 kb on - strand, within Echvi_1409at 1625.453 kb on - strand, within Echvi_1409at 1625.474 kb on + strand, within Echvi_1409at 1625.474 kb on + strand, within Echvi_1409at 1625.477 kb on + strand, within Echvi_1409at 1625.478 kb on - strand, within Echvi_1409at 1625.611 kb on - strand, within Echvi_1409at 1625.612 kb on + strand, within Echvi_1409at 1625.612 kb on + strand, within Echvi_1409at 1625.612 kb on + strand, within Echvi_1409at 1625.612 kb on + strand, within Echvi_1409at 1625.612 kb on + strand, within Echvi_1409at 1625.613 kb on - strand, within Echvi_1409at 1625.613 kb on - strand, within Echvi_1409at 1625.613 kb on - strand, within Echvi_1409at 1625.617 kb on - strand, within Echvi_1409at 1625.617 kb on - strand, within Echvi_1409at 1625.617 kb on - strand, within Echvi_1409at 1625.617 kb on - strand, within Echvi_1409at 1625.617 kb on - strand, within Echvi_1409at 1625.642 kb on + strand, within Echvi_1409at 1625.643 kb on - strand, within Echvi_1409at 1625.657 kb on - strand, within Echvi_1409at 1625.661 kb on + strand, within Echvi_1409at 1625.662 kb on - strand, within Echvi_1409at 1625.663 kb on + strand, within Echvi_1409at 1625.663 kb on + strand, within Echvi_1409at 1625.664 kb on - strand, within Echvi_1409at 1625.664 kb on - strand, within Echvi_1409at 1625.664 kb on - strand, within Echvi_1409at 1625.698 kb on + strand, within Echvi_1409at 1625.699 kb on - strand, within Echvi_1409at 1625.706 kb on + strand, within Echvi_1409at 1625.706 kb on + strand, within Echvi_1409at 1625.706 kb on + strand, within Echvi_1409at 1625.707 kb on - strand, within Echvi_1409at 1625.755 kb on + strand, within Echvi_1409at 1625.792 kb on - strand, within Echvi_1409at 1625.792 kb on - strand, within Echvi_1409at 1625.799 kb on - strand, within Echvi_1409at 1625.878 kb on + strand, within Echvi_1409at 1625.879 kb on - strand, within Echvi_1409

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,623,060 - -0.7
1,623,060 - +1.9
1,623,060 - +0.4
1,623,142 - Echvi_1407 0.20 -0.8
1,623,142 - Echvi_1407 0.20 +0.4
1,623,150 - Echvi_1407 0.21 -0.4
1,623,150 - Echvi_1407 0.21 +0.7
1,623,150 - Echvi_1407 0.21 +0.7
1,623,150 - Echvi_1407 0.21 +1.9
1,623,150 - Echvi_1407 0.21 +0.1
1,623,156 - Echvi_1407 0.21 +1.0
1,623,156 - Echvi_1407 0.21 +0.8
1,623,156 - Echvi_1407 0.21 -0.8
1,623,156 - Echvi_1407 0.21 -2.6
1,623,182 - Echvi_1407 0.25 -0.5
1,623,323 - Echvi_1407 0.43 -0.2
1,623,336 - Echvi_1407 0.45 -0.1
1,623,336 - Echvi_1407 0.45 -0.2
1,623,340 - Echvi_1407 0.45 -0.5
1,623,355 - Echvi_1407 0.47 -0.7
1,623,366 - Echvi_1407 0.48 -0.4
1,623,366 - Echvi_1407 0.48 +0.2
1,623,368 - Echvi_1407 0.49 -0.1
1,623,368 - Echvi_1407 0.49 -2.2
1,623,368 - Echvi_1407 0.49 -0.4
1,623,368 - Echvi_1407 0.49 +0.9
1,623,385 - Echvi_1407 0.51 +1.4
1,623,388 - Echvi_1407 0.51 -0.4
1,623,403 - Echvi_1407 0.53 -0.5
1,623,403 - Echvi_1407 0.53 +0.1
1,623,439 - Echvi_1407 0.58 -0.7
1,623,439 - Echvi_1407 0.58 +0.6
1,623,444 - Echvi_1407 0.58 +0.2
1,623,469 - Echvi_1407 0.62 -1.7
1,623,471 - Echvi_1407 0.62 -0.0
1,623,560 - Echvi_1407 0.73 +0.8
1,623,560 - Echvi_1407 0.73 +0.1
1,623,575 - Echvi_1407 0.75 -1.4
1,623,635 - Echvi_1407 0.83 +0.9
1,623,695 - -1.6
1,623,748 - +0.3
1,623,808 - -0.0
1,623,808 - -0.2
1,623,810 - +1.1
1,623,810 - +0.6
1,623,814 - -2.4
1,623,814 - -2.2
1,623,820 - +1.5
1,623,820 - +0.5
1,623,873 - +0.4
1,623,963 - -0.7
1,623,963 - +1.1
1,623,963 - -0.3
1,623,969 - +0.4
1,624,036 - +0.4
1,624,040 - +0.4
1,624,068 - -3.5
1,624,077 - +0.1
1,624,080 - -0.9
1,624,181 - Echvi_1408 0.15 +0.6
1,624,195 - Echvi_1408 0.16 +0.6
1,624,195 - Echvi_1408 0.16 +0.2
1,624,220 - Echvi_1408 0.19 -0.8
1,624,231 - Echvi_1408 0.20 +0.1
1,624,243 - Echvi_1408 0.22 +0.9
1,624,249 - Echvi_1408 0.23 -0.9
1,624,256 - Echvi_1408 0.23 +0.7
1,624,256 - Echvi_1408 0.23 +1.0
1,624,256 - Echvi_1408 0.23 -0.1
1,624,292 - Echvi_1408 0.28 +0.2
1,624,297 - Echvi_1408 0.28 +1.1
1,624,302 - Echvi_1408 0.29 +0.1
1,624,478 - Echvi_1408 0.49 +0.2
1,624,478 - Echvi_1408 0.49 +1.4
1,624,515 - Echvi_1408 0.54 +1.3
1,624,642 - Echvi_1408 0.69 -1.4
1,624,759 - Echvi_1408 0.82 +0.7
1,624,837 - -0.5
1,624,925 - -0.0
1,624,925 - -2.9
1,624,929 - +0.1
1,624,955 + +1.1
1,624,956 - -1.4
1,624,956 - -0.0
1,624,966 + -2.1
1,624,967 - -2.9
1,624,967 - -0.2
1,624,973 + -0.5
1,624,987 - -0.9
1,624,992 + +0.6
1,624,992 + -0.8
1,625,004 - -0.3
1,625,017 + +0.1
1,625,060 + -0.0
1,625,073 - +1.4
1,625,180 - Echvi_1409 0.12 -1.3
1,625,210 + Echvi_1409 0.13 +1.7
1,625,224 + Echvi_1409 0.14 -1.9
1,625,224 + Echvi_1409 0.14 -0.3
1,625,233 + Echvi_1409 0.14 +0.5
1,625,234 - Echvi_1409 0.14 +0.3
1,625,257 + Echvi_1409 0.15 +1.2
1,625,308 + Echvi_1409 0.18 +0.6
1,625,309 - Echvi_1409 0.18 -1.6
1,625,336 + Echvi_1409 0.19 +0.5
1,625,336 + Echvi_1409 0.19 -0.3
1,625,336 + Echvi_1409 0.19 +0.4
1,625,336 + Echvi_1409 0.19 +0.6
1,625,336 + Echvi_1409 0.19 +1.8
1,625,337 - Echvi_1409 0.19 +0.9
1,625,337 - Echvi_1409 0.19 +0.4
1,625,340 - Echvi_1409 0.19 -2.0
1,625,340 - Echvi_1409 0.19 +0.9
1,625,381 - Echvi_1409 0.21 -0.9
1,625,381 - Echvi_1409 0.21 -0.7
1,625,447 + Echvi_1409 0.24 -1.8
1,625,448 - Echvi_1409 0.24 -0.1
1,625,448 - Echvi_1409 0.24 +0.6
1,625,448 - Echvi_1409 0.24 -1.0
1,625,450 + Echvi_1409 0.24 -0.3
1,625,451 - Echvi_1409 0.24 -0.1
1,625,451 - Echvi_1409 0.24 +0.0
1,625,451 - Echvi_1409 0.24 +1.2
1,625,452 + Echvi_1409 0.24 +0.5
1,625,453 - Echvi_1409 0.24 +0.2
1,625,453 - Echvi_1409 0.24 +0.6
1,625,453 - Echvi_1409 0.24 +1.0
1,625,453 - Echvi_1409 0.24 +0.1
1,625,474 + Echvi_1409 0.25 +0.8
1,625,474 + Echvi_1409 0.25 +0.1
1,625,477 + Echvi_1409 0.25 +0.8
1,625,478 - Echvi_1409 0.25 -1.8
1,625,611 - Echvi_1409 0.31 -0.7
1,625,612 + Echvi_1409 0.31 +0.7
1,625,612 + Echvi_1409 0.31 +0.7
1,625,612 + Echvi_1409 0.31 -0.1
1,625,612 + Echvi_1409 0.31 -0.1
1,625,612 + Echvi_1409 0.31 -0.7
1,625,613 - Echvi_1409 0.31 +0.1
1,625,613 - Echvi_1409 0.31 +0.6
1,625,613 - Echvi_1409 0.31 -2.9
1,625,617 - Echvi_1409 0.31 +0.5
1,625,617 - Echvi_1409 0.31 -0.4
1,625,617 - Echvi_1409 0.31 +1.2
1,625,617 - Echvi_1409 0.31 +0.8
1,625,617 - Echvi_1409 0.31 -2.4
1,625,642 + Echvi_1409 0.32 +0.3
1,625,643 - Echvi_1409 0.32 +0.8
1,625,657 - Echvi_1409 0.33 +0.5
1,625,661 + Echvi_1409 0.33 +1.0
1,625,662 - Echvi_1409 0.33 -0.8
1,625,663 + Echvi_1409 0.33 -1.8
1,625,663 + Echvi_1409 0.33 +0.7
1,625,664 - Echvi_1409 0.33 +1.0
1,625,664 - Echvi_1409 0.33 -1.1
1,625,664 - Echvi_1409 0.33 +0.6
1,625,698 + Echvi_1409 0.35 +0.2
1,625,699 - Echvi_1409 0.35 +0.2
1,625,706 + Echvi_1409 0.35 -1.1
1,625,706 + Echvi_1409 0.35 +0.4
1,625,706 + Echvi_1409 0.35 -1.5
1,625,707 - Echvi_1409 0.35 +1.2
1,625,755 + Echvi_1409 0.37 +1.1
1,625,792 - Echvi_1409 0.39 +0.7
1,625,792 - Echvi_1409 0.39 -2.6
1,625,799 - Echvi_1409 0.39 +0.9
1,625,878 + Echvi_1409 0.42 -2.1
1,625,879 - Echvi_1409 0.42 +1.6

Or see this region's nucleotide sequence