Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0842 and Echvi_0843 are separated by 34 nucleotides Echvi_0843 and Echvi_0844 are separated by 596 nucleotides Echvi_0844 and Echvi_0845 are separated by 35 nucleotides
Echvi_0842: Echvi_0842 - Membrane proteins related to metalloendopeptidases, at 962,589 to 963,887
_0842
Echvi_0843: Echvi_0843 - hypothetical protein, at 963,922 to 964,029
_0843
Echvi_0844: Echvi_0844 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 964,626 to 966,128
_0844
Echvi_0845: Echvi_0845 - hypothetical protein, at 966,164 to 966,709
_0845
Position (kb) 964
965
966
967 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 963.860 kb on + strand at 963.861 kb on - strand at 963.885 kb on + strand at 963.885 kb on + strand at 963.885 kb on + strand at 963.886 kb on - strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.122 kb on - strand at 964.122 kb on - strand at 964.124 kb on + strand at 964.125 kb on - strand at 964.132 kb on + strand at 964.133 kb on - strand at 964.143 kb on + strand at 964.158 kb on + strand at 964.190 kb on - strand at 964.190 kb on - strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.287 kb on - strand at 964.328 kb on + strand at 964.362 kb on + strand at 964.362 kb on + strand at 964.432 kb on + strand at 964.469 kb on - strand at 964.472 kb on + strand at 964.472 kb on + strand at 964.475 kb on + strand at 964.479 kb on + strand at 964.482 kb on + strand at 964.500 kb on + strand at 964.580 kb on + strand at 964.581 kb on - strand at 964.595 kb on + strand at 966.130 kb on - strand at 966.159 kb on + strand at 966.159 kb on + strand at 966.159 kb on + strand at 966.228 kb on + strand, within Echvi_0845 at 966.229 kb on - strand, within Echvi_0845 at 966.233 kb on - strand, within Echvi_0845 at 966.236 kb on + strand, within Echvi_0845 at 966.394 kb on + strand, within Echvi_0845 at 966.394 kb on + strand, within Echvi_0845 at 966.395 kb on - strand, within Echvi_0845 at 966.400 kb on + strand, within Echvi_0845 at 966.456 kb on - strand, within Echvi_0845 at 966.501 kb on + strand, within Echvi_0845 at 966.501 kb on + strand, within Echvi_0845 at 966.502 kb on - strand, within Echvi_0845 at 966.507 kb on - strand, within Echvi_0845 at 966.532 kb on - strand, within Echvi_0845 at 966.572 kb on + strand, within Echvi_0845 at 966.632 kb on + strand, within Echvi_0845 at 966.667 kb on - strand at 966.688 kb on - strand at 966.707 kb on + strand at 966.734 kb on + strand at 966.751 kb on + strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.762 kb on + strand at 966.763 kb on - strand at 966.768 kb on - strand at 966.779 kb on + strand at 966.806 kb on + strand at 966.814 kb on + strand at 966.850 kb on + strand at 966.863 kb on - strand at 966.866 kb on + strand at 966.886 kb on + strand at 966.886 kb on + strand at 966.887 kb on - strand at 966.887 kb on - strand at 966.925 kb on + strand at 966.925 kb on + strand at 966.931 kb on + strand at 966.931 kb on + strand at 966.935 kb on + strand at 966.936 kb on - strand at 966.936 kb on - strand at 966.936 kb on - strand at 966.948 kb on - strand at 967.011 kb on + strand at 967.012 kb on - strand at 967.012 kb on - strand at 967.012 kb on - strand at 967.016 kb on - strand at 967.070 kb on + strand at 967.070 kb on + strand at 967.070 kb on + strand at 967.071 kb on - strand at 967.108 kb on - strand at 967.125 kb on - strand at 967.125 kb on - strand at 967.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 963,860 + -1.1 963,861 - +1.4 963,885 + -0.9 963,885 + -0.6 963,885 + -0.1 963,886 - -0.0 964,121 + +0.8 964,121 + +1.1 964,121 + +1.9 964,121 + -0.5 964,122 - +0.5 964,122 - -0.4 964,124 + -0.3 964,125 - -0.2 964,132 + +1.4 964,133 - -0.1 964,143 + +0.4 964,158 + -2.9 964,190 - -3.6 964,190 - -0.4 964,264 + +0.1 964,264 + -0.4 964,264 + +0.0 964,264 + -0.3 964,287 - +0.4 964,328 + -1.4 964,362 + +0.4 964,362 + -2.6 964,432 + -0.4 964,469 - -2.1 964,472 + -0.6 964,472 + -0.1 964,475 + +0.7 964,479 + +0.3 964,482 + +0.5 964,500 + -0.2 964,580 + -1.9 964,581 - -0.2 964,595 + -1.9 966,130 - +0.1 966,159 + +0.3 966,159 + -1.2 966,159 + +0.8 966,228 + Echvi_0845 0.12 -0.4 966,229 - Echvi_0845 0.12 +0.6 966,233 - Echvi_0845 0.13 +0.4 966,236 + Echvi_0845 0.13 -0.4 966,394 + Echvi_0845 0.42 -1.0 966,394 + Echvi_0845 0.42 -1.2 966,395 - Echvi_0845 0.42 +0.7 966,400 + Echvi_0845 0.43 +0.9 966,456 - Echvi_0845 0.53 -1.9 966,501 + Echvi_0845 0.62 +1.1 966,501 + Echvi_0845 0.62 +1.1 966,502 - Echvi_0845 0.62 +1.1 966,507 - Echvi_0845 0.63 -1.2 966,532 - Echvi_0845 0.67 +2.1 966,572 + Echvi_0845 0.75 +0.7 966,632 + Echvi_0845 0.86 +3.1 966,667 - -0.2 966,688 - -0.2 966,707 + -0.2 966,734 + +0.6 966,751 + -0.2 966,752 - -0.8 966,752 - +1.5 966,752 - -0.0 966,752 - +0.2 966,762 + -0.0 966,763 - -0.1 966,768 - -0.4 966,779 + +0.4 966,806 + -1.1 966,814 + -0.4 966,850 + +0.8 966,863 - +0.1 966,866 + +0.1 966,886 + +0.1 966,886 + +0.0 966,887 - -0.7 966,887 - +0.3 966,925 + +1.0 966,925 + -1.2 966,931 + +0.7 966,931 + -0.4 966,935 + +0.7 966,936 - +0.2 966,936 - -0.4 966,936 - +0.1 966,948 - +0.6 967,011 + +1.0 967,012 - +0.9 967,012 - +0.7 967,012 - -0.7 967,016 - +0.9 967,070 + +1.0 967,070 + +0.2 967,070 + +0.7 967,071 - -0.9 967,108 - +1.9 967,125 - -0.3 967,125 - -0.7 967,125 - -2.0
Or see this region's nucleotide sequence