Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0555 and Echvi_0556 are separated by 242 nucleotides Echvi_0556 and Echvi_0557 are separated by 263 nucleotides Echvi_0557 and Echvi_0558 are separated by 208 nucleotides
Echvi_0555: Echvi_0555 - Small-conductance mechanosensitive channel, at 624,954 to 627,503
_0555
Echvi_0556: Echvi_0556 - Alpha-L-fucosidase, at 627,746 to 629,080
_0556
Echvi_0557: Echvi_0557 - Molecular chaperone (small heat shock protein), at 629,344 to 629,772
_0557
Echvi_0558: Echvi_0558 - periplasmic serine protease, Do/DeqQ family, at 629,981 to 631,468
_0558
Position (kb) 627
628
629
630 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 626.766 kb on - strand, within Echvi_0555 at 626.775 kb on + strand, within Echvi_0555 at 626.775 kb on + strand, within Echvi_0555 at 626.775 kb on + strand, within Echvi_0555 at 626.776 kb on - strand, within Echvi_0555 at 626.776 kb on - strand, within Echvi_0555 at 626.776 kb on - strand, within Echvi_0555 at 626.777 kb on + strand, within Echvi_0555 at 626.777 kb on + strand, within Echvi_0555 at 626.777 kb on + strand, within Echvi_0555 at 626.778 kb on - strand, within Echvi_0555 at 626.778 kb on - strand, within Echvi_0555 at 626.778 kb on - strand, within Echvi_0555 at 626.779 kb on + strand, within Echvi_0555 at 626.779 kb on + strand, within Echvi_0555 at 626.779 kb on + strand, within Echvi_0555 at 626.780 kb on - strand, within Echvi_0555 at 626.780 kb on - strand, within Echvi_0555 at 626.784 kb on - strand, within Echvi_0555 at 626.853 kb on + strand, within Echvi_0555 at 626.887 kb on + strand, within Echvi_0555 at 626.917 kb on + strand, within Echvi_0555 at 626.917 kb on + strand, within Echvi_0555 at 626.918 kb on - strand, within Echvi_0555 at 626.919 kb on + strand, within Echvi_0555 at 626.936 kb on + strand, within Echvi_0555 at 627.006 kb on + strand, within Echvi_0555 at 627.012 kb on + strand, within Echvi_0555 at 627.013 kb on - strand, within Echvi_0555 at 627.013 kb on - strand, within Echvi_0555 at 627.013 kb on - strand, within Echvi_0555 at 627.018 kb on - strand, within Echvi_0555 at 627.018 kb on - strand, within Echvi_0555 at 627.026 kb on + strand, within Echvi_0555 at 627.072 kb on - strand, within Echvi_0555 at 627.100 kb on - strand, within Echvi_0555 at 627.116 kb on - strand, within Echvi_0555 at 627.128 kb on + strand, within Echvi_0555 at 627.132 kb on + strand, within Echvi_0555 at 627.132 kb on + strand, within Echvi_0555 at 627.200 kb on + strand, within Echvi_0555 at 627.219 kb on + strand, within Echvi_0555 at 627.220 kb on - strand, within Echvi_0555 at 627.220 kb on - strand, within Echvi_0555 at 627.231 kb on - strand, within Echvi_0555 at 627.278 kb on + strand at 627.281 kb on + strand at 627.281 kb on + strand at 627.282 kb on - strand at 627.282 kb on - strand at 627.285 kb on + strand at 627.285 kb on + strand at 627.286 kb on - strand at 627.286 kb on - strand at 627.293 kb on - strand at 627.321 kb on - strand at 627.344 kb on + strand at 627.345 kb on - strand at 627.401 kb on + strand at 627.408 kb on + strand at 627.454 kb on - strand at 627.517 kb on + strand at 627.527 kb on + strand at 627.687 kb on + strand at 627.740 kb on + strand at 627.740 kb on + strand at 627.745 kb on + strand at 627.745 kb on + strand at 627.783 kb on + strand at 627.891 kb on - strand, within Echvi_0556 at 627.936 kb on - strand, within Echvi_0556 at 627.944 kb on + strand, within Echvi_0556 at 627.945 kb on - strand, within Echvi_0556 at 627.945 kb on - strand, within Echvi_0556 at 627.945 kb on - strand, within Echvi_0556 at 627.953 kb on + strand, within Echvi_0556 at 627.953 kb on + strand, within Echvi_0556 at 627.953 kb on + strand, within Echvi_0556 at 627.954 kb on - strand, within Echvi_0556 at 627.955 kb on + strand, within Echvi_0556 at 627.955 kb on + strand, within Echvi_0556 at 627.989 kb on + strand, within Echvi_0556 at 627.989 kb on + strand, within Echvi_0556 at 627.990 kb on - strand, within Echvi_0556 at 627.990 kb on - strand, within Echvi_0556 at 627.990 kb on - strand, within Echvi_0556 at 628.190 kb on + strand, within Echvi_0556 at 628.190 kb on + strand, within Echvi_0556 at 628.190 kb on + strand, within Echvi_0556 at 628.191 kb on - strand, within Echvi_0556 at 628.224 kb on - strand, within Echvi_0556 at 628.400 kb on - strand, within Echvi_0556 at 628.517 kb on + strand, within Echvi_0556 at 628.578 kb on - strand, within Echvi_0556 at 628.600 kb on - strand, within Echvi_0556 at 628.606 kb on - strand, within Echvi_0556 at 628.698 kb on + strand, within Echvi_0556 at 628.699 kb on - strand, within Echvi_0556 at 628.699 kb on - strand, within Echvi_0556 at 628.742 kb on + strand, within Echvi_0556 at 628.743 kb on - strand, within Echvi_0556 at 628.743 kb on - strand, within Echvi_0556 at 628.743 kb on - strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.819 kb on + strand, within Echvi_0556 at 628.820 kb on - strand, within Echvi_0556 at 628.820 kb on - strand, within Echvi_0556 at 628.820 kb on - strand, within Echvi_0556 at 628.820 kb on - strand, within Echvi_0556 at 628.820 kb on - strand, within Echvi_0556 at 628.833 kb on - strand, within Echvi_0556 at 628.839 kb on + strand, within Echvi_0556 at 628.897 kb on - strand, within Echvi_0556 at 628.967 kb on + strand at 628.967 kb on + strand at 628.991 kb on + strand at 629.088 kb on - strand at 629.099 kb on + strand at 629.172 kb on - strand at 629.172 kb on - strand at 629.292 kb on - strand at 629.340 kb on + strand at 629.340 kb on + strand at 629.343 kb on + strand at 629.344 kb on - strand at 629.344 kb on - strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.359 kb on + strand at 629.360 kb on - strand at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.388 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.488 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.546 kb on + strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.547 kb on - strand, within Echvi_0557 at 629.553 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.727 kb on + strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.728 kb on - strand, within Echvi_0557 at 629.770 kb on + strand at 629.778 kb on - strand at 629.881 kb on - strand at 629.894 kb on + strand at 629.937 kb on - strand at 630.027 kb on + strand at 630.028 kb on - strand at 630.028 kb on - strand at 630.055 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 626,766 - Echvi_0555 0.71 -0.5 626,775 + Echvi_0555 0.71 +0.9 626,775 + Echvi_0555 0.71 -2.3 626,775 + Echvi_0555 0.71 +0.7 626,776 - Echvi_0555 0.71 -2.8 626,776 - Echvi_0555 0.71 -1.2 626,776 - Echvi_0555 0.71 +0.1 626,777 + Echvi_0555 0.71 +0.4 626,777 + Echvi_0555 0.71 -0.1 626,777 + Echvi_0555 0.71 -0.7 626,778 - Echvi_0555 0.72 -0.1 626,778 - Echvi_0555 0.72 -0.5 626,778 - Echvi_0555 0.72 +0.5 626,779 + Echvi_0555 0.72 +0.8 626,779 + Echvi_0555 0.72 +0.5 626,779 + Echvi_0555 0.72 +1.5 626,780 - Echvi_0555 0.72 -0.4 626,780 - Echvi_0555 0.72 +0.9 626,784 - Echvi_0555 0.72 -1.4 626,853 + Echvi_0555 0.74 +0.4 626,887 + Echvi_0555 0.76 -0.3 626,917 + Echvi_0555 0.77 +0.5 626,917 + Echvi_0555 0.77 -0.9 626,918 - Echvi_0555 0.77 -0.3 626,919 + Echvi_0555 0.77 -1.2 626,936 + Echvi_0555 0.78 +0.8 627,006 + Echvi_0555 0.80 +0.2 627,012 + Echvi_0555 0.81 +1.5 627,013 - Echvi_0555 0.81 +1.1 627,013 - Echvi_0555 0.81 +0.3 627,013 - Echvi_0555 0.81 -1.6 627,018 - Echvi_0555 0.81 +0.3 627,018 - Echvi_0555 0.81 +0.1 627,026 + Echvi_0555 0.81 -0.1 627,072 - Echvi_0555 0.83 +1.6 627,100 - Echvi_0555 0.84 +0.9 627,116 - Echvi_0555 0.85 -0.2 627,128 + Echvi_0555 0.85 +0.5 627,132 + Echvi_0555 0.85 -1.6 627,132 + Echvi_0555 0.85 +0.3 627,200 + Echvi_0555 0.88 +0.7 627,219 + Echvi_0555 0.89 -1.9 627,220 - Echvi_0555 0.89 +1.8 627,220 - Echvi_0555 0.89 -1.0 627,231 - Echvi_0555 0.89 -0.1 627,278 + -1.9 627,281 + -0.2 627,281 + +0.6 627,282 - +0.1 627,282 - -0.9 627,285 + -2.3 627,285 + -0.1 627,286 - +0.7 627,286 - +2.7 627,293 - -0.2 627,321 - +0.3 627,344 + +0.7 627,345 - +1.5 627,401 + +1.4 627,408 + -1.1 627,454 - -1.2 627,517 + +1.3 627,527 + -1.6 627,687 + -0.2 627,740 + -0.2 627,740 + -0.5 627,745 + -1.1 627,745 + -2.2 627,783 + -1.0 627,891 - Echvi_0556 0.11 +0.0 627,936 - Echvi_0556 0.14 -0.5 627,944 + Echvi_0556 0.15 -0.1 627,945 - Echvi_0556 0.15 +1.2 627,945 - Echvi_0556 0.15 +0.9 627,945 - Echvi_0556 0.15 -1.7 627,953 + Echvi_0556 0.16 -0.6 627,953 + Echvi_0556 0.16 +0.6 627,953 + Echvi_0556 0.16 -0.8 627,954 - Echvi_0556 0.16 -1.4 627,955 + Echvi_0556 0.16 -1.1 627,955 + Echvi_0556 0.16 +0.9 627,989 + Echvi_0556 0.18 -1.2 627,989 + Echvi_0556 0.18 -1.6 627,990 - Echvi_0556 0.18 -0.3 627,990 - Echvi_0556 0.18 -0.4 627,990 - Echvi_0556 0.18 -0.2 628,190 + Echvi_0556 0.33 +1.8 628,190 + Echvi_0556 0.33 -1.1 628,190 + Echvi_0556 0.33 +2.5 628,191 - Echvi_0556 0.33 -0.5 628,224 - Echvi_0556 0.36 +1.2 628,400 - Echvi_0556 0.49 -0.9 628,517 + Echvi_0556 0.58 +0.1 628,578 - Echvi_0556 0.62 -0.3 628,600 - Echvi_0556 0.64 -0.7 628,606 - Echvi_0556 0.64 +0.2 628,698 + Echvi_0556 0.71 -2.0 628,699 - Echvi_0556 0.71 +0.7 628,699 - Echvi_0556 0.71 +1.0 628,742 + Echvi_0556 0.75 -0.2 628,743 - Echvi_0556 0.75 -0.0 628,743 - Echvi_0556 0.75 +0.1 628,743 - Echvi_0556 0.75 -0.4 628,819 + Echvi_0556 0.80 -0.7 628,819 + Echvi_0556 0.80 +0.6 628,819 + Echvi_0556 0.80 -1.1 628,819 + Echvi_0556 0.80 +0.0 628,819 + Echvi_0556 0.80 +0.1 628,819 + Echvi_0556 0.80 -0.8 628,819 + Echvi_0556 0.80 -1.0 628,820 - Echvi_0556 0.80 -1.0 628,820 - Echvi_0556 0.80 -1.5 628,820 - Echvi_0556 0.80 +1.5 628,820 - Echvi_0556 0.80 +1.2 628,820 - Echvi_0556 0.80 -0.9 628,833 - Echvi_0556 0.81 +0.3 628,839 + Echvi_0556 0.82 +0.4 628,897 - Echvi_0556 0.86 -1.0 628,967 + -0.5 628,967 + -0.1 628,991 + +1.8 629,088 - +0.5 629,099 + +0.6 629,172 - +1.5 629,172 - -0.9 629,292 - +1.1 629,340 + +0.2 629,340 + +1.0 629,343 + -0.3 629,344 - -0.9 629,344 - +0.7 629,359 + +0.5 629,359 + -2.0 629,359 + +0.7 629,360 - +0.3 629,388 + Echvi_0557 0.10 +1.0 629,388 + Echvi_0557 0.10 +1.0 629,388 + Echvi_0557 0.10 +0.1 629,488 + Echvi_0557 0.34 +0.7 629,488 + Echvi_0557 0.34 +0.0 629,546 + Echvi_0557 0.47 +0.5 629,546 + Echvi_0557 0.47 +1.4 629,546 + Echvi_0557 0.47 +0.1 629,547 - Echvi_0557 0.47 -1.8 629,547 - Echvi_0557 0.47 -0.0 629,553 + Echvi_0557 0.49 -1.1 629,727 + Echvi_0557 0.89 -0.2 629,727 + Echvi_0557 0.89 -0.8 629,728 - Echvi_0557 0.90 -0.0 629,728 - Echvi_0557 0.90 +0.3 629,728 - Echvi_0557 0.90 +0.5 629,728 - Echvi_0557 0.90 -0.8 629,770 + +1.5 629,778 - +0.5 629,881 - +1.2 629,894 + +0.6 629,937 - +1.2 630,027 + -1.7 630,028 - -1.9 630,028 - -0.3 630,055 - +0.0
Or see this region's nucleotide sequence