Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21275 and CA264_21280 are separated by 38 nucleotides CA264_21280 and CA264_21285 are separated by 62 nucleotides CA264_21285 and CA264_21290 are separated by 12 nucleotides CA264_21290 and CA264_21295 are separated by 23 nucleotides
CA264_21275: CA264_21275 - hypothetical protein, at 122,195 to 122,824
_21275
CA264_21280: CA264_21280 - hypothetical protein, at 122,863 to 123,234
_21280
CA264_21285: CA264_21285 - hypothetical protein, at 123,297 to 123,764
_21285
CA264_21290: CA264_21290 - SCO family protein, at 123,777 to 124,433
_21290
CA264_21295: CA264_21295 - hypothetical protein, at 124,457 to 124,855
_21295
Position (kb)
123
124 Strain fitness (log2 ratio)
-2
-1
0
1 at 122.453 kb on + strand, within CA264_21275 at 122.454 kb on - strand, within CA264_21275 at 122.464 kb on - strand, within CA264_21275 at 122.822 kb on + strand at 122.852 kb on - strand at 122.879 kb on + strand at 122.892 kb on + strand at 122.938 kb on - strand, within CA264_21280 at 122.938 kb on - strand, within CA264_21280 at 122.958 kb on - strand, within CA264_21280 at 123.100 kb on + strand, within CA264_21280 at 123.163 kb on - strand, within CA264_21280 at 123.174 kb on - strand, within CA264_21280 at 123.194 kb on - strand, within CA264_21280 at 123.319 kb on - strand at 123.323 kb on - strand at 123.329 kb on + strand at 123.449 kb on - strand, within CA264_21285 at 123.449 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.456 kb on - strand, within CA264_21285 at 123.491 kb on - strand, within CA264_21285 at 123.759 kb on - strand at 123.804 kb on + strand at 123.923 kb on + strand, within CA264_21290 at 123.923 kb on + strand, within CA264_21290 at 124.069 kb on - strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.078 kb on - strand, within CA264_21290 at 124.144 kb on + strand, within CA264_21290 at 124.313 kb on - strand, within CA264_21290 at 124.431 kb on + strand at 124.449 kb on + strand at 124.450 kb on - strand at 124.548 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 122,453 + CA264_21275 0.41 -0.3 122,454 - CA264_21275 0.41 +0.7 122,464 - CA264_21275 0.43 +0.1 122,822 + -1.5 122,852 - +0.1 122,879 + -1.8 122,892 + -1.6 122,938 - CA264_21280 0.20 -0.0 122,938 - CA264_21280 0.20 -0.1 122,958 - CA264_21280 0.26 -0.8 123,100 + CA264_21280 0.64 -0.4 123,163 - CA264_21280 0.81 +0.1 123,174 - CA264_21280 0.84 +0.3 123,194 - CA264_21280 0.89 -0.7 123,319 - +0.0 123,323 - +1.0 123,329 + +0.3 123,449 - CA264_21285 0.32 -0.3 123,449 - CA264_21285 0.32 -0.2 123,456 - CA264_21285 0.34 +1.2 123,456 - CA264_21285 0.34 -0.0 123,491 - CA264_21285 0.41 -0.6 123,759 - +0.6 123,804 + -0.5 123,923 + CA264_21290 0.22 -0.7 123,923 + CA264_21290 0.22 -0.9 124,069 - CA264_21290 0.44 -0.2 124,077 + CA264_21290 0.46 +0.5 124,077 + CA264_21290 0.46 -0.0 124,077 + CA264_21290 0.46 +0.4 124,078 - CA264_21290 0.46 -0.4 124,144 + CA264_21290 0.56 -0.0 124,313 - CA264_21290 0.82 +1.3 124,431 + -0.7 124,449 + -0.5 124,450 - -0.1 124,548 - CA264_21295 0.23 +0.9 124,710 - CA264_21295 0.63 -0.0 124,710 - CA264_21295 0.63 +0.5
Or see this region's nucleotide sequence