Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18615 and CA264_18620 overlap by 11 nucleotides CA264_18620 and CA264_18625 are separated by 9 nucleotides CA264_18625 and CA264_18630 are separated by 301 nucleotides
CA264_18615: CA264_18615 - hypothetical protein, at 4,329,364 to 4,329,897
_18615
CA264_18620: CA264_18620 - rod shape-determining protein MreC, at 4,329,887 to 4,330,753
_18620
CA264_18625: CA264_18625 - rod shape-determining protein, at 4,330,763 to 4,331,788
_18625
CA264_18630: CA264_18630 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase, at 4,332,090 to 4,333,613
_18630
Position (kb)
4330
4331
4332 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4329.877 kb on + strand at 4329.878 kb on - strand at 4330.756 kb on - strand at 4330.756 kb on - strand at 4330.764 kb on + strand at 4331.797 kb on - strand at 4331.833 kb on + strand at 4331.833 kb on + strand at 4331.894 kb on + strand at 4331.895 kb on - strand at 4332.520 kb on - strand, within CA264_18630 at 4332.542 kb on + strand, within CA264_18630 at 4332.542 kb on + strand, within CA264_18630 at 4332.607 kb on - strand, within CA264_18630 at 4332.760 kb on + strand, within CA264_18630
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 4,329,877 + -2.6 4,329,878 - -1.0 4,330,756 - -0.6 4,330,756 - +0.1 4,330,764 + +0.6 4,331,797 - +1.9 4,331,833 + +0.0 4,331,833 + -0.4 4,331,894 + -0.9 4,331,895 - -0.8 4,332,520 - CA264_18630 0.28 -0.7 4,332,542 + CA264_18630 0.30 -1.0 4,332,542 + CA264_18630 0.30 -1.2 4,332,607 - CA264_18630 0.34 -0.3 4,332,760 + CA264_18630 0.44 -1.2
Or see this region's nucleotide sequence