Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18225

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
4,237,836	+		CA264_18215	0.33	-0.3
4,237,885	+		CA264_18215	0.44	-0.3
4,237,886	-		CA264_18215	0.44	+0.6
4,237,886	-		CA264_18215	0.44	-1.4
4,237,933	+		CA264_18215	0.55	-0.6
4,237,942	+		CA264_18215	0.57	-0.2
4,238,111	-				-0.7
4,238,183	-				-0.3
4,238,188	-				-0.3
4,238,208	+				+0.2
4,238,209	-				-0.7
4,238,302	+				-0.4
4,238,400	+		CA264_18220	0.33	-1.4
4,238,445	-		CA264_18220	0.49	-0.4
4,238,445	-		CA264_18220	0.49	-0.1
4,238,446	+		CA264_18220	0.49	+0.0
4,238,641	+				+0.0
4,238,642	-				+0.8
4,238,642	-				+0.5
4,238,643	+				+0.1
4,238,644	-				+0.0
4,238,649	-				+0.1
4,238,649	-				-1.0
4,238,649	-				-0.3
4,238,653	+				+0.1
4,238,704	-				+0.4
4,238,704	-				-0.0
4,238,743	-				+0.4
4,238,796	+				-0.3
4,238,797	-				+0.1
4,238,958	+		CA264_18225	0.25	-0.5
4,238,988	+		CA264_18225	0.30	+0.4
4,238,989	-		CA264_18225	0.30	+0.2
4,238,992	-		CA264_18225	0.31	-0.2
4,239,035	+		CA264_18225	0.39	+0.3
4,239,035	+		CA264_18225	0.39	-0.0
4,239,087	+		CA264_18225	0.48	+0.0
4,239,087	+		CA264_18225	0.48	+0.4
4,239,090	+		CA264_18225	0.49	-0.1
4,239,090	+		CA264_18225	0.49	-0.2
4,239,092	+		CA264_18225	0.49	-0.5
4,239,093	-		CA264_18225	0.49	-0.3
4,239,094	+		CA264_18225	0.49	+0.1
4,239,094	+		CA264_18225	0.49	-0.1
4,239,095	-		CA264_18225	0.50	+1.2
4,239,095	-		CA264_18225	0.50	+0.8
4,239,232	+		CA264_18225	0.74	+0.3
4,239,232	+		CA264_18225	0.74	+0.0
4,239,318	+		CA264_18225	0.90	-1.4
4,239,318	+		CA264_18225	0.90	+1.0
4,239,373	-				+1.1
4,239,389	+				-0.4
4,239,408	+				+0.1
4,239,420	+				+0.4
4,239,420	+				-0.5
4,239,421	-				+1.3
4,239,421	-				+1.4
4,239,437	+				-0.3
4,239,482	-		CA264_18230	0.11	+0.6
4,239,484	-		CA264_18230	0.11	+0.2
4,239,562	+		CA264_18230	0.22	+0.4
4,239,578	-		CA264_18230	0.25	-0.4
4,239,578	-		CA264_18230	0.25	+0.3
4,239,579	+		CA264_18230	0.25	-0.5
4,239,579	+		CA264_18230	0.25	-0.1
4,239,583	-		CA264_18230	0.25	-0.5
4,239,586	+		CA264_18230	0.26	-0.5
4,239,586	+		CA264_18230	0.26	+0.4
4,239,586	+		CA264_18230	0.26	-0.3
4,239,587	-		CA264_18230	0.26	-0.2
4,239,642	-		CA264_18230	0.34	-0.6
4,239,642	-		CA264_18230	0.34	+0.2
4,239,652	+		CA264_18230	0.35	-0.5
4,239,653	-		CA264_18230	0.35	-0.2
4,239,669	-		CA264_18230	0.38	-1.0
4,239,715	+		CA264_18230	0.44	+0.0
4,239,763	+		CA264_18230	0.51	-0.4
4,239,794	-		CA264_18230	0.56	+0.0
4,239,802	-		CA264_18230	0.57	+2.5
4,239,810	+		CA264_18230	0.58	-0.3
4,239,874	-		CA264_18230	0.67	-0.1
4,239,877	+		CA264_18230	0.68	+0.3
4,239,878	-		CA264_18230	0.68	+1.6
4,239,878	-		CA264_18230	0.68	+0.4
4,239,878	-		CA264_18230	0.68	-0.7
4,239,878	-		CA264_18230	0.68	-0.3
4,239,878	-		CA264_18230	0.68	-1.0
4,239,917	-		CA264_18230	0.74	+0.5
4,239,917	-		CA264_18230	0.74	+1.2
4,239,964	+		CA264_18230	0.80	-0.3
4,239,965	-		CA264_18230	0.81	-0.1
4,239,965	-		CA264_18230	0.81	-0.6
4,239,972	+		CA264_18230	0.82	-0.9
4,239,972	+		CA264_18230	0.82	-0.7
4,239,994	+		CA264_18230	0.85	-0.1
4,239,994	+		CA264_18230	0.85	+1.4
4,239,995	-		CA264_18230	0.85	+2.1
4,240,102	-				+0.2
4,240,242	-				+0.0
4,240,256	-				+0.0
4,240,288	+				-0.6
4,240,288	+				+0.4
4,240,288	+				-0.2
4,240,289	-				-0.1
4,240,289	-				-0.1
4,240,300	+				+1.0
4,240,313	+				-0.3
4,240,318	+				+0.3