Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12325

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
2,870,528	-		CA264_12320	0.16	+0.3
2,870,686	+		CA264_12320	0.34	+0.3
2,870,687	-		CA264_12320	0.34	+0.0
2,870,687	-		CA264_12320	0.34	+0.4
2,870,693	+		CA264_12320	0.34	-0.5
2,870,693	+		CA264_12320	0.34	+1.4
2,870,717	-		CA264_12320	0.37	+0.2
2,870,918	+		CA264_12320	0.59	-0.1
2,871,018	+		CA264_12320	0.70	-0.3
2,871,155	+		CA264_12320	0.85	-0.0
2,871,156	-		CA264_12320	0.86	-0.7
2,871,171	-		CA264_12320	0.87	+0.2
2,871,171	-		CA264_12320	0.87	-0.3
2,871,171	-		CA264_12320	0.87	+0.1
2,871,285	-				-0.0
2,871,345	+				+0.0
2,871,345	+				-0.6
2,871,345	+				-0.8
2,871,399	-				+0.1
2,871,399	-				-2.2
2,871,399	-				+1.3
2,871,406	+				+0.3
2,871,407	-				+1.7
2,871,407	-				-0.7
2,871,408	+				-0.4
2,871,448	+				+0.1
2,871,448	+				-0.9
2,871,449	-				-0.5
2,871,449	-				+0.5
2,871,450	+				-1.4
2,871,456	+				+0.3
2,871,456	+				+0.8
2,871,456	+				-0.2
2,871,456	+				+0.6
2,871,456	+				-0.4
2,871,456	+				+0.5
2,871,456	+				+0.7
2,871,457	-				+0.5
2,871,472	+				-0.5
2,871,473	-				-0.4
2,871,478	-				+0.1
2,871,478	-				+0.2
2,871,521	-				-1.5
2,871,521	-				-0.9
2,871,597	+				-1.5
2,871,597	+				+0.3
2,871,598	-				+0.5
2,871,619	+				+0.9
2,871,619	+				+0.2
2,871,626	-				+0.8
2,871,745	-		CA264_12325	0.14	+0.2
2,871,751	-		CA264_12325	0.14	+2.0
2,871,755	+		CA264_12325	0.15	-0.2
2,871,762	-		CA264_12325	0.15	+0.3
2,871,785	+		CA264_12325	0.16	+0.7
2,871,830	+		CA264_12325	0.19	-0.4
2,871,899	+		CA264_12325	0.22	+0.4
2,871,900	-		CA264_12325	0.22	+0.8
2,871,900	-		CA264_12325	0.22	-0.1
2,871,912	+		CA264_12325	0.23	+0.1
2,872,098	+		CA264_12325	0.32	+0.9
2,872,102	+		CA264_12325	0.33	-0.8
2,872,197	-				+0.8
2,872,336	+		CA264_12325	0.45	+0.7
2,872,337	-		CA264_12325	0.45	+0.6
2,872,337	-		CA264_12325	0.45	+0.8
2,872,337	-		CA264_12325	0.45	-0.3
2,872,337	-		CA264_12325	0.45	+0.8
2,872,368	-		CA264_12325	0.46	+0.0
2,872,394	-		CA264_12325	0.48	+0.2
2,872,471	+				+1.8
2,872,489	-		CA264_12325	0.53	+0.3
2,872,489	-		CA264_12325	0.53	-0.4
2,872,572	+		CA264_12325	0.57	+2.0
2,872,793	+		CA264_12325	0.68	+1.3
2,872,794	-		CA264_12325	0.68	+0.3
2,872,804	+		CA264_12325	0.69	+0.7
2,872,808	-		CA264_12325	0.69	+0.3
2,872,833	-		CA264_12325	0.70	+0.9
2,872,837	-		CA264_12325	0.71	-0.4
2,872,871	+		CA264_12325	0.72	+0.4
2,872,872	-		CA264_12325	0.73	+0.1
2,872,919	+		CA264_12325	0.75	+0.1
2,872,982	+		CA264_12325	0.78	+1.2
2,873,014	-		CA264_12325	0.80	-0.4
2,873,066	-		CA264_12325	0.83	+0.1
2,873,066	-		CA264_12325	0.83	+1.2
2,873,112	+		CA264_12325	0.85	+0.2
2,873,113	-		CA264_12325	0.85	+0.1
2,873,127	+		CA264_12325	0.86	+3.4
2,873,127	+		CA264_12325	0.86	+0.3
2,873,128	-		CA264_12325	0.86	+0.5
2,873,128	-		CA264_12325	0.86	+0.8
2,873,128	-		CA264_12325	0.86	+0.1
2,873,145	+		CA264_12325	0.87	-0.7
2,873,146	-				+0.4
2,873,164	+		CA264_12325	0.88	+0.0
2,873,164	+		CA264_12325	0.88	+0.0
2,873,164	+		CA264_12325	0.88	-0.8
2,873,173	+		CA264_12325	0.88	-1.3
2,873,173	+		CA264_12325	0.88	+0.6
2,873,173	+		CA264_12325	0.88	+0.7
2,873,173	+		CA264_12325	0.88	-0.2
2,873,174	-		CA264_12325	0.88	+0.3
2,873,174	-		CA264_12325	0.88	+0.1
2,873,174	-		CA264_12325	0.88	+0.1
2,873,175	+		CA264_12325	0.88	+0.3
2,873,175	+		CA264_12325	0.88	+0.4
2,873,257	+				+0.2
2,873,257	+				+0.9
2,873,258	-				+0.4
2,873,258	-				+1.4
2,873,258	-				-0.0
2,873,263	-				+0.2
2,873,310	-				+0.9
2,873,342	+				+0.1
2,873,343	-				+0.2
2,873,356	-				+0.6
2,873,385	-				+0.0
2,873,388	-				+0.4
2,873,388	-				+0.2
2,873,403	-				-1.1
2,873,423	+				-1.4
2,873,424	-				-1.9
2,873,424	-				-1.4
2,873,428	+				-1.7
2,873,443	+				-1.3
2,873,443	+				-0.5
2,873,443	+				-1.8
2,873,487	+				-0.9
2,873,488	-				-0.5
2,873,493	-				-0.6
2,873,512	+				-1.1
2,873,705	+				-0.3
2,873,705	+				-1.1
2,873,829	-				-1.7
2,873,842	+				-2.5
2,873,930	+				+0.8
2,873,930	+				+0.5
2,873,930	+				-0.9
2,873,931	-				-2.1
2,873,963	-				-1.9
2,873,972	-				-0.6
2,874,065	+				-1.3
2,874,093	-				-0.5
2,874,093	-				-1.1
2,874,096	-				-1.6
2,874,146	-				-1.3
2,874,210	-		CA264_12330	0.33	-2.0
2,874,226	+		CA264_12330	0.39	+0.8
2,874,384	-				-2.0
2,874,394	-				-1.1
2,874,394	-				-1.3