Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05080

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,175,026	-		CA264_05070	0.89	-0.6
1,175,129	+				-0.3
1,175,205	+		CA264_05075	0.11	-0.2
1,175,206	-		CA264_05075	0.11	-0.1
1,175,216	+		CA264_05075	0.13	-0.1
1,175,223	+		CA264_05075	0.14	+0.8
1,175,224	-		CA264_05075	0.14	+0.4
1,175,255	+		CA264_05075	0.19	+0.3
1,175,256	-		CA264_05075	0.19	-0.8
1,175,355	+		CA264_05075	0.35	-1.2
1,175,438	+		CA264_05075	0.48	+0.5
1,175,453	-		CA264_05075	0.51	-0.1
1,175,459	+		CA264_05075	0.52	+1.3
1,175,459	+		CA264_05075	0.52	-0.0
1,175,460	-		CA264_05075	0.52	+0.3
1,175,460	-		CA264_05075	0.52	-0.3
1,175,535	+		CA264_05075	0.64	-0.2
1,175,536	-		CA264_05075	0.64	+0.7
1,175,536	-				+0.7
1,175,536	-		CA264_05075	0.64	-0.4
1,175,569	+		CA264_05075	0.69	-1.5
1,175,569	+		CA264_05075	0.69	+0.4
1,175,598	+		CA264_05075	0.74	+1.1
1,175,598	+		CA264_05075	0.74	+0.3
1,175,599	-		CA264_05075	0.74	+0.0
1,175,716	+				-0.2
1,175,716	+				-0.2
1,175,717	-				-0.4
1,175,717	-				+0.4
1,175,798	-				-0.2
1,175,836	+				+0.3
1,175,837	-				-0.1
1,175,840	+				+0.1
1,175,840	+				-0.4
1,175,890	+				+0.7
1,175,891	-				-1.1
1,175,934	+				+0.8
1,175,951	-				+0.1
1,175,955	+				-1.2
1,175,968	+				-1.9
1,176,005	+				+0.4
1,176,006	-				+0.2
1,176,078	+				+0.1
1,176,098	+				+0.3
1,176,110	-				-1.1
1,176,158	+		CA264_05080	0.13	+0.2
1,176,182	+		CA264_05080	0.15	+0.4
1,176,183	-		CA264_05080	0.15	-0.9
1,176,183	-		CA264_05080	0.15	+0.9
1,176,210	-		CA264_05080	0.18	+0.0
1,176,210	-		CA264_05080	0.18	+0.1
1,176,210	-		CA264_05080	0.18	-1.2
1,176,401	+		CA264_05080	0.34	-0.4
1,176,401	+		CA264_05080	0.34	+0.8
1,176,401	+		CA264_05080	0.34	+0.4
1,176,414	+		CA264_05080	0.35	-0.3
1,176,515	-		CA264_05080	0.43	+0.1
1,176,675	+		CA264_05080	0.57	-0.8
1,176,691	-		CA264_05080	0.58	-0.7
1,176,765	+		CA264_05080	0.64	+0.7
1,176,814	+		CA264_05080	0.68	+0.1
1,176,821	-		CA264_05080	0.69	-1.1
1,176,821	-		CA264_05080	0.69	-0.2
1,176,821	-		CA264_05080	0.69	+0.3
1,176,821	-		CA264_05080	0.69	+0.0
1,176,821	-		CA264_05080	0.69	-0.0
1,176,822	+		CA264_05080	0.69	+0.4
1,176,822	+		CA264_05080	0.69	+0.7
1,176,822	+		CA264_05080	0.69	+1.4
1,176,822	+		CA264_05080	0.69	+0.0
1,176,823	-		CA264_05080	0.69	-0.9
1,176,823	-		CA264_05080	0.69	-0.1
1,176,888	+		CA264_05080	0.75	-1.3
1,176,899	+		CA264_05080	0.76	-0.2
1,176,900	-		CA264_05080	0.76	+0.0
1,176,904	+		CA264_05080	0.76	+0.2
1,176,905	-		CA264_05080	0.76	+0.1
1,177,117	+				+0.7
1,177,149	+				-0.6
1,177,149	+				-0.1
1,177,150	-				+0.0
1,177,162	-				+0.4
1,177,187	+				-0.8
1,177,193	+				-1.0
1,177,194	-				+0.5
1,177,235	-				-0.4
1,177,326	-		CA264_05085	0.19	-0.5
1,177,326	-		CA264_05085	0.19	-0.4
1,177,405	+		CA264_05085	0.29	-0.2
1,177,405	+		CA264_05085	0.29	-0.1
1,177,406	-		CA264_05085	0.29	-0.3
1,177,406	-		CA264_05085	0.29	+0.0
1,177,410	-		CA264_05085	0.30	+0.2
1,177,494	+		CA264_05085	0.41	-0.6
1,177,532	-		CA264_05085	0.45	-0.0
1,177,536	-		CA264_05085	0.46	-0.3
1,177,538	-		CA264_05085	0.46	-0.9
1,177,538	-		CA264_05085	0.46	+0.2
1,177,547	+		CA264_05085	0.47	-0.4
1,177,547	+		CA264_05085	0.47	-1.6
1,177,547	+		CA264_05085	0.47	-0.2
1,177,548	-		CA264_05085	0.47	-0.3
1,177,576	-		CA264_05085	0.51	+0.3
1,177,587	+		CA264_05085	0.53	+1.3
1,177,587	+		CA264_05085	0.53	+0.5
1,177,588	-		CA264_05085	0.53	-0.5
1,177,589	+		CA264_05085	0.53	+0.3
1,177,610	+		CA264_05085	0.55	+0.3
1,177,611	-		CA264_05085	0.56	+1.1
1,177,670	-		CA264_05085	0.63	-1.2
1,177,680	-		CA264_05085	0.64	+2.3
1,177,716	-		CA264_05085	0.69	+0.3
1,177,738	+		CA264_05085	0.72	-0.1
1,177,758	+		CA264_05085	0.75	+0.4
1,177,758	+		CA264_05085	0.75	-0.0
1,177,759	-		CA264_05085	0.75	-0.5
1,177,778	+		CA264_05085	0.77	+0.4
1,177,779	-		CA264_05085	0.77	+0.3
1,177,935	-				-0.9
1,177,935	-				+0.1
1,177,965	-				-0.6
1,177,965	-				-0.0
1,178,019	-				-0.8
1,178,049	+				+1.3
1,178,158	+		CA264_05090	0.20	-0.4
1,178,159	-		CA264_05090	0.20	+0.3
1,178,159	-		CA264_05090	0.20	-0.1
1,178,160	+		CA264_05090	0.20	-0.2
1,178,176	-		CA264_05090	0.22	+0.5