Experiment: m.b. Doxycycline hyclate 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02355 and CA264_02360 are separated by 179 nucleotides CA264_02360 and CA264_02365 overlap by 8 nucleotides
CA264_02355: CA264_02355 - hypothetical protein, at 544,057 to 545,112
_02355
CA264_02360: CA264_02360 - exodeoxyribonuclease VII small subunit, at 545,292 to 545,555
_02360
CA264_02365: CA264_02365 - exodeoxyribonuclease VII large subunit, at 545,548 to 547,107
_02365
Position (kb) 545
546 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 544.621 kb on - strand, within CA264_02355 at 544.624 kb on + strand, within CA264_02355 at 544.625 kb on - strand, within CA264_02355 at 544.625 kb on - strand, within CA264_02355 at 544.625 kb on - strand, within CA264_02355 at 544.699 kb on + strand, within CA264_02355 at 544.699 kb on + strand, within CA264_02355 at 544.699 kb on + strand, within CA264_02355 at 544.699 kb on + strand, within CA264_02355 at 544.702 kb on + strand, within CA264_02355 at 544.703 kb on - strand, within CA264_02355 at 544.712 kb on - strand, within CA264_02355 at 544.766 kb on - strand, within CA264_02355 at 544.766 kb on - strand, within CA264_02355 at 544.779 kb on + strand, within CA264_02355 at 544.780 kb on - strand, within CA264_02355 at 544.783 kb on + strand, within CA264_02355 at 544.783 kb on + strand, within CA264_02355 at 544.783 kb on + strand, within CA264_02355 at 544.784 kb on - strand, within CA264_02355 at 545.036 kb on - strand at 545.038 kb on + strand at 545.038 kb on + strand at 545.039 kb on - strand at 545.039 kb on - strand at 545.073 kb on + strand at 545.110 kb on + strand at 545.124 kb on - strand at 545.128 kb on + strand at 545.129 kb on - strand at 545.146 kb on - strand at 545.159 kb on + strand at 545.159 kb on + strand at 545.210 kb on - strand at 545.210 kb on - strand at 545.211 kb on + strand at 545.318 kb on + strand at 545.318 kb on + strand at 545.319 kb on - strand, within CA264_02360 at 545.469 kb on + strand, within CA264_02360 at 545.505 kb on + strand, within CA264_02360 at 545.506 kb on - strand, within CA264_02360 at 545.527 kb on + strand, within CA264_02360 at 545.541 kb on + strand at 545.542 kb on - strand at 545.560 kb on - strand at 545.569 kb on + strand at 545.641 kb on - strand at 545.647 kb on - strand at 545.679 kb on - strand at 545.787 kb on + strand, within CA264_02365 at 545.823 kb on + strand, within CA264_02365 at 546.365 kb on + strand, within CA264_02365 at 546.502 kb on - strand, within CA264_02365 at 546.527 kb on + strand, within CA264_02365 at 546.530 kb on + strand, within CA264_02365 at 546.537 kb on - strand, within CA264_02365
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.004 mg/ml remove 544,621 - CA264_02355 0.53 +0.1 544,624 + CA264_02355 0.54 +1.4 544,625 - CA264_02355 0.54 +1.5 544,625 - CA264_02355 0.54 -0.0 544,625 - CA264_02355 0.54 -1.4 544,699 + CA264_02355 0.61 -0.8 544,699 + CA264_02355 0.61 +0.2 544,699 + CA264_02355 0.61 +0.2 544,699 + CA264_02355 0.61 -0.5 544,702 + CA264_02355 0.61 -0.5 544,703 - CA264_02355 0.61 +0.1 544,712 - CA264_02355 0.62 +0.2 544,766 - CA264_02355 0.67 -0.4 544,766 - CA264_02355 0.67 -0.7 544,779 + CA264_02355 0.68 +1.2 544,780 - CA264_02355 0.68 +0.1 544,783 + CA264_02355 0.69 -0.4 544,783 + CA264_02355 0.69 -0.7 544,783 + CA264_02355 0.69 -0.2 544,784 - CA264_02355 0.69 -0.4 545,036 - +0.0 545,038 + -0.7 545,038 + -0.1 545,039 - +0.0 545,039 - -0.8 545,073 + -0.7 545,110 + +0.0 545,124 - -0.4 545,128 + -1.3 545,129 - -2.9 545,146 - -0.5 545,159 + -0.0 545,159 + -1.1 545,210 - -0.9 545,210 - -0.9 545,211 + +0.3 545,318 + +1.2 545,318 + -0.4 545,319 - CA264_02360 0.10 +0.9 545,469 + CA264_02360 0.67 -0.6 545,505 + CA264_02360 0.81 +1.3 545,506 - CA264_02360 0.81 -0.1 545,527 + CA264_02360 0.89 -0.5 545,541 + +0.3 545,542 - +0.0 545,560 - +0.7 545,569 + +0.2 545,641 - +0.5 545,647 - -0.6 545,679 - -0.5 545,787 + CA264_02365 0.15 -0.3 545,823 + CA264_02365 0.18 -0.4 546,365 + CA264_02365 0.52 -0.3 546,502 - CA264_02365 0.61 -0.4 546,527 + CA264_02365 0.63 +0.8 546,530 + CA264_02365 0.63 -0.9 546,537 - CA264_02365 0.63 -0.4
Or see this region's nucleotide sequence