Experiment: Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4836 and PfGW456L13_4837 are separated by 123 nucleotides PfGW456L13_4837 and PfGW456L13_4838 are separated by 49 nucleotides PfGW456L13_4838 and PfGW456L13_4839 are separated by 172 nucleotides
PfGW456L13_4836 - Transglycosylase, Slt family, at 5,403,507 to 5,404,967
_4836
PfGW456L13_4837 - Pyridoxine 5'-phosphate synthase (EC 2.6.99.2), at 5,405,091 to 5,405,837
_4837
PfGW456L13_4838 - DNA recombination and repair protein RecO, at 5,405,887 to 5,406,570
_4838
PfGW456L13_4839 - GTP-binding protein Era, at 5,406,743 to 5,407,645
_4839
Position (kb)
5405
5406 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 5404.137 kb on + strand, within PfGW456L13_4836 at 5404.137 kb on + strand, within PfGW456L13_4836 at 5404.137 kb on + strand, within PfGW456L13_4836 at 5404.138 kb on - strand at 5404.138 kb on - strand, within PfGW456L13_4836 at 5404.138 kb on - strand, within PfGW456L13_4836 at 5404.138 kb on - strand, within PfGW456L13_4836 at 5404.138 kb on - strand, within PfGW456L13_4836 at 5404.243 kb on - strand, within PfGW456L13_4836 at 5404.293 kb on + strand, within PfGW456L13_4836 at 5404.296 kb on + strand, within PfGW456L13_4836 at 5404.297 kb on - strand, within PfGW456L13_4836 at 5404.321 kb on - strand, within PfGW456L13_4836 at 5404.371 kb on + strand, within PfGW456L13_4836 at 5404.371 kb on + strand, within PfGW456L13_4836 at 5404.371 kb on + strand, within PfGW456L13_4836 at 5404.372 kb on - strand, within PfGW456L13_4836 at 5404.581 kb on + strand, within PfGW456L13_4836 at 5404.581 kb on + strand, within PfGW456L13_4836 at 5404.581 kb on + strand, within PfGW456L13_4836 at 5404.582 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.591 kb on - strand, within PfGW456L13_4836 at 5404.657 kb on - strand, within PfGW456L13_4836 at 5404.657 kb on - strand, within PfGW456L13_4836 at 5404.738 kb on + strand, within PfGW456L13_4836 at 5404.738 kb on + strand, within PfGW456L13_4836 at 5404.738 kb on + strand, within PfGW456L13_4836 at 5404.777 kb on - strand, within PfGW456L13_4836 at 5404.777 kb on - strand, within PfGW456L13_4836 at 5404.848 kb on + strand at 5404.848 kb on + strand at 5404.848 kb on + strand at 5404.848 kb on + strand at 5405.092 kb on + strand at 5405.092 kb on + strand at 5405.092 kb on + strand at 5405.093 kb on - strand at 5405.093 kb on - strand at 5405.820 kb on - strand at 5405.877 kb on + strand at 5405.877 kb on + strand at 5405.877 kb on + strand at 5405.877 kb on + strand at 5405.877 kb on + strand at 5405.877 kb on + strand at 5405.878 kb on - strand at 5405.878 kb on - strand at 5405.878 kb on - strand at 5405.878 kb on - strand at 5405.878 kb on - strand at 5406.057 kb on - strand, within PfGW456L13_4838 at 5406.126 kb on + strand, within PfGW456L13_4838 at 5406.126 kb on + strand, within PfGW456L13_4838 at 5406.127 kb on - strand, within PfGW456L13_4838 at 5406.239 kb on + strand, within PfGW456L13_4838 at 5406.240 kb on - strand, within PfGW456L13_4838 at 5406.250 kb on + strand, within PfGW456L13_4838 at 5406.250 kb on + strand, within PfGW456L13_4838 at 5406.305 kb on + strand, within PfGW456L13_4838 at 5406.305 kb on + strand, within PfGW456L13_4838 at 5406.306 kb on - strand, within PfGW456L13_4838 at 5406.306 kb on - strand, within PfGW456L13_4838 at 5406.542 kb on + strand at 5406.542 kb on + strand at 5406.543 kb on - strand at 5406.543 kb on - strand at 5406.543 kb on - strand at 5406.605 kb on + strand at 5406.606 kb on - strand at 5406.606 kb on - strand at 5406.606 kb on - strand at 5406.606 kb on - strand at 5406.609 kb on + strand at 5406.609 kb on + strand at 5406.609 kb on + strand at 5406.609 kb on + strand at 5406.609 kb on + strand at 5406.610 kb on - strand at 5406.610 kb on - strand at 5406.610 kb on - strand at 5406.659 kb on + strand at 5406.669 kb on + strand at 5406.669 kb on + strand at 5406.669 kb on + strand at 5406.669 kb on + strand at 5406.670 kb on - strand at 5406.670 kb on - strand at 5406.670 kb on - strand at 5406.741 kb on + strand at 5406.741 kb on + strand at 5406.741 kb on + strand at 5406.741 kb on + strand at 5406.744 kb on + strand at 5406.744 kb on + strand at 5406.744 kb on + strand at 5406.744 kb on + strand at 5406.744 kb on + strand at 5406.745 kb on - strand at 5406.745 kb on - strand at 5406.745 kb on - strand at 5406.745 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.5 mg/ml remove 5,404,137 + PfGW456L13_4836 0.43 -0.8 5,404,137 + PfGW456L13_4836 0.43 -0.5 5,404,137 + PfGW456L13_4836 0.43 -4.2 5,404,138 - -0.2 5,404,138 - PfGW456L13_4836 0.43 -3.0 5,404,138 - PfGW456L13_4836 0.43 -3.4 5,404,138 - PfGW456L13_4836 0.43 -2.8 5,404,138 - PfGW456L13_4836 0.43 -2.1 5,404,243 - PfGW456L13_4836 0.50 -3.0 5,404,293 + PfGW456L13_4836 0.54 -1.7 5,404,296 + PfGW456L13_4836 0.54 -4.9 5,404,297 - PfGW456L13_4836 0.54 -3.0 5,404,321 - PfGW456L13_4836 0.56 -1.5 5,404,371 + PfGW456L13_4836 0.59 -3.0 5,404,371 + PfGW456L13_4836 0.59 -2.8 5,404,371 + PfGW456L13_4836 0.59 -1.0 5,404,372 - PfGW456L13_4836 0.59 -0.2 5,404,581 + PfGW456L13_4836 0.74 -1.2 5,404,581 + PfGW456L13_4836 0.74 -0.2 5,404,581 + PfGW456L13_4836 0.74 -1.8 5,404,582 - PfGW456L13_4836 0.74 -2.3 5,404,591 - PfGW456L13_4836 0.74 -2.5 5,404,591 - PfGW456L13_4836 0.74 -2.3 5,404,591 - PfGW456L13_4836 0.74 -0.9 5,404,591 - PfGW456L13_4836 0.74 -2.2 5,404,591 - PfGW456L13_4836 0.74 +0.1 5,404,591 - PfGW456L13_4836 0.74 -0.0 5,404,657 - PfGW456L13_4836 0.79 -1.2 5,404,657 - PfGW456L13_4836 0.79 -2.2 5,404,738 + PfGW456L13_4836 0.84 -1.4 5,404,738 + PfGW456L13_4836 0.84 -1.8 5,404,738 + PfGW456L13_4836 0.84 -1.2 5,404,777 - PfGW456L13_4836 0.87 -1.5 5,404,777 - PfGW456L13_4836 0.87 -2.3 5,404,848 + -1.8 5,404,848 + -0.2 5,404,848 + -1.9 5,404,848 + -3.1 5,405,092 + -0.9 5,405,092 + -0.0 5,405,092 + -0.8 5,405,093 - -0.9 5,405,093 - +0.2 5,405,820 - -0.6 5,405,877 + -1.7 5,405,877 + +0.5 5,405,877 + -0.4 5,405,877 + -1.2 5,405,877 + +0.2 5,405,877 + -1.0 5,405,878 - -0.5 5,405,878 - -0.8 5,405,878 - +0.2 5,405,878 - +0.2 5,405,878 - -0.0 5,406,057 - PfGW456L13_4838 0.25 +1.0 5,406,126 + PfGW456L13_4838 0.35 -0.7 5,406,126 + PfGW456L13_4838 0.35 -0.5 5,406,127 - PfGW456L13_4838 0.35 -0.2 5,406,239 + PfGW456L13_4838 0.51 -0.9 5,406,240 - PfGW456L13_4838 0.52 +0.3 5,406,250 + PfGW456L13_4838 0.53 -1.8 5,406,250 + PfGW456L13_4838 0.53 -0.7 5,406,305 + PfGW456L13_4838 0.61 -0.5 5,406,305 + PfGW456L13_4838 0.61 -0.4 5,406,306 - PfGW456L13_4838 0.61 +0.1 5,406,306 - PfGW456L13_4838 0.61 -1.0 5,406,542 + +0.2 5,406,542 + -1.2 5,406,543 - -0.4 5,406,543 - +1.4 5,406,543 - -0.4 5,406,605 + -1.1 5,406,606 - +1.2 5,406,606 - +0.9 5,406,606 - +0.1 5,406,606 - -0.9 5,406,609 + -0.0 5,406,609 + -0.6 5,406,609 + -0.8 5,406,609 + -0.0 5,406,609 + +0.4 5,406,610 - -0.2 5,406,610 - -0.2 5,406,610 - -0.1 5,406,659 + -0.2 5,406,669 + +0.3 5,406,669 + -0.2 5,406,669 + +0.6 5,406,669 + -1.3 5,406,670 - +1.3 5,406,670 - -0.8 5,406,670 - -0.2 5,406,741 + -0.2 5,406,741 + +0.2 5,406,741 + +0.3 5,406,741 + +1.1 5,406,744 + -1.1 5,406,744 + +0.2 5,406,744 + -1.0 5,406,744 + +0.3 5,406,744 + -1.2 5,406,745 - +0.8 5,406,745 - -0.2 5,406,745 - -0.9 5,406,745 - -1.4
Or see this region's nucleotide sequence