Experiment: LB_plus_SM_buffer with P22_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3573 and GFF3574 are separated by 0 nucleotides GFF3574 and GFF3575 are separated by 181 nucleotides
GFF3573 - Tetrathionate reductase subunit C, at 331,463 to 332,485
GFF3573
GFF3574 - Tetrathionate reductase subunit B, at 332,486 to 333,220
GFF3574
GFF3575 - Tetrathionate reductase sensory transduction histidine kinase, at 333,402 to 335,180
GFF3575
Position (kb) 332
333
334 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 331.510 kb on + strand at 331.510 kb on + strand at 331.520 kb on + strand at 331.697 kb on + strand, within GFF3573 at 331.972 kb on + strand, within GFF3573 at 332.229 kb on + strand, within GFF3573 at 332.230 kb on - strand, within GFF3573 at 332.313 kb on - strand, within GFF3573 at 332.434 kb on + strand at 332.435 kb on - strand at 332.435 kb on - strand at 332.560 kb on - strand, within GFF3574 at 332.595 kb on - strand, within GFF3574 at 332.660 kb on - strand, within GFF3574 at 332.790 kb on + strand, within GFF3574 at 332.791 kb on - strand, within GFF3574 at 333.080 kb on - strand, within GFF3574 at 333.090 kb on + strand, within GFF3574 at 333.451 kb on + strand at 333.486 kb on - strand at 333.553 kb on + strand at 333.743 kb on + strand, within GFF3575 at 333.744 kb on - strand, within GFF3575 at 333.744 kb on - strand, within GFF3575 at 333.744 kb on - strand, within GFF3575 at 333.864 kb on + strand, within GFF3575 at 333.866 kb on + strand, within GFF3575 at 333.866 kb on + strand, within GFF3575 at 333.948 kb on + strand, within GFF3575 at 333.948 kb on + strand, within GFF3575 at 333.948 kb on + strand, within GFF3575 at 333.949 kb on - strand, within GFF3575 at 334.007 kb on + strand, within GFF3575 at 334.099 kb on - strand, within GFF3575
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with P22_phage 15 MOI remove 331,510 + +0.0 331,510 + +2.9 331,520 + -0.9 331,697 + GFF3573 0.23 +2.1 331,972 + GFF3573 0.50 -1.7 332,229 + GFF3573 0.75 +0.2 332,230 - GFF3573 0.75 -1.3 332,313 - GFF3573 0.83 +0.1 332,434 + -1.5 332,435 - -2.2 332,435 - -1.6 332,560 - GFF3574 0.10 -0.3 332,595 - GFF3574 0.15 +1.1 332,660 - GFF3574 0.24 -0.4 332,790 + GFF3574 0.41 +0.7 332,791 - GFF3574 0.41 +0.9 333,080 - GFF3574 0.81 +2.4 333,090 + GFF3574 0.82 -0.3 333,451 + -0.7 333,486 - +2.1 333,553 + +0.2 333,743 + GFF3575 0.19 -1.9 333,744 - GFF3575 0.19 -0.2 333,744 - GFF3575 0.19 +0.1 333,744 - GFF3575 0.19 -0.9 333,864 + GFF3575 0.26 -1.0 333,866 + GFF3575 0.26 +1.1 333,866 + GFF3575 0.26 +0.6 333,948 + GFF3575 0.31 -2.1 333,948 + GFF3575 0.31 +0.4 333,948 + GFF3575 0.31 -0.8 333,949 - GFF3575 0.31 -0.7 334,007 + GFF3575 0.34 +0.2 334,099 - GFF3575 0.39 +0.2
Or see this region's nucleotide sequence