Experiment: LB_plus_SM_buffer with P22_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2440 and GFF2441 are separated by 3 nucleotides GFF2441 and GFF2442 are separated by 10 nucleotides
GFF2440 - Anaerobic sulfite reductase subunit A, at 54,928 to 55,971
GFF2440
GFF2441 - Anaerobic sulfite reductase subunit B, at 55,975 to 56,793
GFF2441
GFF2442 - Anaerobic sulfite reductase subunit C (EC 1.8.1.-), at 56,804 to 57,817
GFF2442
Position (kb) 55
56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 55.150 kb on + strand, within GFF2440 at 55.227 kb on + strand, within GFF2440 at 55.250 kb on - strand, within GFF2440 at 55.252 kb on - strand, within GFF2440 at 55.252 kb on - strand, within GFF2440 at 55.663 kb on + strand, within GFF2440 at 55.663 kb on + strand, within GFF2440 at 55.664 kb on - strand, within GFF2440 at 55.664 kb on - strand, within GFF2440 at 55.685 kb on - strand, within GFF2440 at 55.819 kb on - strand, within GFF2440 at 55.831 kb on + strand, within GFF2440 at 55.832 kb on - strand, within GFF2440 at 56.184 kb on - strand, within GFF2441 at 56.229 kb on + strand, within GFF2441 at 56.312 kb on + strand, within GFF2441 at 56.475 kb on + strand, within GFF2441 at 56.476 kb on - strand, within GFF2441 at 56.476 kb on - strand, within GFF2441 at 56.577 kb on + strand, within GFF2441 at 56.578 kb on - strand, within GFF2441 at 56.620 kb on - strand, within GFF2441 at 56.735 kb on - strand at 56.735 kb on - strand at 56.760 kb on + strand at 56.816 kb on - strand at 56.906 kb on - strand, within GFF2442 at 57.073 kb on - strand, within GFF2442 at 57.137 kb on - strand, within GFF2442 at 57.373 kb on + strand, within GFF2442 at 57.591 kb on + strand, within GFF2442 at 57.615 kb on - strand, within GFF2442 at 57.653 kb on + strand, within GFF2442 at 57.657 kb on + strand, within GFF2442 at 57.657 kb on + strand, within GFF2442 at 57.657 kb on + strand, within GFF2442 at 57.657 kb on + strand, within GFF2442 at 57.661 kb on + strand, within GFF2442 at 57.701 kb on - strand, within GFF2442
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with P22_phage 15 MOI remove 55,150 + GFF2440 0.21 -0.1 55,227 + GFF2440 0.29 -3.0 55,250 - GFF2440 0.31 -0.6 55,252 - GFF2440 0.31 +1.7 55,252 - GFF2440 0.31 +0.2 55,663 + GFF2440 0.70 +0.0 55,663 + GFF2440 0.70 -0.1 55,664 - GFF2440 0.70 -0.0 55,664 - GFF2440 0.70 +3.8 55,685 - GFF2440 0.73 -1.6 55,819 - GFF2440 0.85 +0.7 55,831 + GFF2440 0.86 +0.2 55,832 - GFF2440 0.87 +1.3 56,184 - GFF2441 0.26 +0.7 56,229 + GFF2441 0.31 +1.3 56,312 + GFF2441 0.41 -0.3 56,475 + GFF2441 0.61 +2.5 56,476 - GFF2441 0.61 +1.0 56,476 - GFF2441 0.61 +0.6 56,577 + GFF2441 0.74 -0.7 56,578 - GFF2441 0.74 +0.3 56,620 - GFF2441 0.79 +1.4 56,735 - -0.6 56,735 - +1.3 56,760 + -0.1 56,816 - +0.6 56,906 - GFF2442 0.10 +0.3 57,073 - GFF2442 0.27 -1.4 57,137 - GFF2442 0.33 +1.6 57,373 + GFF2442 0.56 +0.6 57,591 + GFF2442 0.78 +0.5 57,615 - GFF2442 0.80 +1.2 57,653 + GFF2442 0.84 +0.5 57,657 + GFF2442 0.84 -0.2 57,657 + GFF2442 0.84 -0.4 57,657 + GFF2442 0.84 +0.2 57,657 + GFF2442 0.84 +1.3 57,661 + GFF2442 0.85 -0.4 57,701 - GFF2442 0.88 +0.0
Or see this region's nucleotide sequence