Experiment: LB_plus_SM_buffer with P22_phage 15 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1371 and GFF1372 are separated by 2 nucleotides GFF1372 and GFF1373 overlap by 8 nucleotides
GFF1371 - putative phage tail fiber protein H, at 20,572 to 22,317
GFF1371
GFF1372 - Putative phage tail protein, at 22,320 to 22,952
GFF1372
GFF1373 - Phage baseplate, at 22,945 to 24,060
GFF1373
Position (kb)
22
23 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 21.364 kb on - strand, within GFF1371 at 21.364 kb on - strand, within GFF1371 at 21.364 kb on - strand, within GFF1371 at 21.463 kb on - strand, within GFF1371 at 21.531 kb on + strand, within GFF1371 at 21.531 kb on + strand, within GFF1371 at 21.532 kb on - strand, within GFF1371 at 21.532 kb on - strand, within GFF1371 at 21.532 kb on - strand, within GFF1371 at 21.630 kb on + strand, within GFF1371 at 21.636 kb on + strand, within GFF1371 at 21.637 kb on - strand, within GFF1371 at 21.637 kb on - strand, within GFF1371 at 21.637 kb on - strand, within GFF1371 at 21.637 kb on - strand, within GFF1371 at 21.694 kb on - strand, within GFF1371 at 21.949 kb on - strand, within GFF1371 at 22.058 kb on + strand, within GFF1371 at 22.059 kb on - strand, within GFF1371 at 22.135 kb on - strand, within GFF1371 at 22.238 kb on - strand at 22.476 kb on - strand, within GFF1372 at 22.660 kb on - strand, within GFF1372 at 22.699 kb on + strand, within GFF1372 at 22.704 kb on - strand, within GFF1372 at 22.728 kb on + strand, within GFF1372 at 22.782 kb on + strand, within GFF1372 at 22.840 kb on + strand, within GFF1372 at 22.841 kb on - strand, within GFF1372 at 23.049 kb on - strand at 23.065 kb on + strand, within GFF1373 at 23.185 kb on - strand, within GFF1373 at 23.236 kb on - strand, within GFF1373 at 23.442 kb on - strand, within GFF1373 at 23.488 kb on - strand, within GFF1373 at 23.488 kb on - strand, within GFF1373 at 23.488 kb on - strand, within GFF1373 at 23.488 kb on - strand, within GFF1373 at 23.558 kb on + strand, within GFF1373 at 23.644 kb on + strand, within GFF1373 at 23.645 kb on - strand, within GFF1373
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with P22_phage 15 MOI remove 21,364 - GFF1371 0.45 -0.1 21,364 - GFF1371 0.45 -0.2 21,364 - GFF1371 0.45 -0.2 21,463 - GFF1371 0.51 +0.2 21,531 + GFF1371 0.55 +1.8 21,531 + GFF1371 0.55 +0.1 21,532 - GFF1371 0.55 +0.4 21,532 - GFF1371 0.55 +1.0 21,532 - GFF1371 0.55 +0.4 21,630 + GFF1371 0.61 -0.1 21,636 + GFF1371 0.61 -2.8 21,637 - GFF1371 0.61 -1.1 21,637 - GFF1371 0.61 -2.5 21,637 - GFF1371 0.61 -0.3 21,637 - GFF1371 0.61 +1.8 21,694 - GFF1371 0.64 -0.0 21,949 - GFF1371 0.79 -2.0 22,058 + GFF1371 0.85 -0.6 22,059 - GFF1371 0.85 +1.3 22,135 - GFF1371 0.90 +0.2 22,238 - +0.6 22,476 - GFF1372 0.25 -2.5 22,660 - GFF1372 0.54 -0.6 22,699 + GFF1372 0.60 -0.8 22,704 - GFF1372 0.61 -1.2 22,728 + GFF1372 0.64 +1.6 22,782 + GFF1372 0.73 -1.0 22,840 + GFF1372 0.82 -0.6 22,841 - GFF1372 0.82 -1.4 23,049 - +1.0 23,065 + GFF1373 0.11 -1.9 23,185 - GFF1373 0.22 +1.0 23,236 - GFF1373 0.26 -0.5 23,442 - GFF1373 0.45 +0.8 23,488 - GFF1373 0.49 +1.8 23,488 - GFF1373 0.49 -1.0 23,488 - GFF1373 0.49 +2.5 23,488 - GFF1373 0.49 -0.3 23,558 + GFF1373 0.55 -1.3 23,644 + GFF1373 0.63 +0.8 23,645 - GFF1373 0.63 +1.2
Or see this region's nucleotide sequence