Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4159

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,975,772	-				-0.3
4,975,795	+				-0.6
4,975,800	-				-1.0
4,975,903	-				-3.1
4,975,959	-				+0.9
4,975,959	-				+1.1
4,976,034	-				+0.4
4,976,106	-				-1.4
4,976,136	+		Echvi_4158	0.12	-0.2
4,976,136	+		Echvi_4158	0.12	-0.3
4,976,136	+		Echvi_4158	0.12	-1.6
4,976,137	-		Echvi_4158	0.12	+1.8
4,976,261	+		Echvi_4158	0.30	-0.0
4,976,280	-		Echvi_4158	0.32	+0.8
4,976,280	-		Echvi_4158	0.32	-0.6
4,976,283	-		Echvi_4158	0.33	-1.0
4,976,284	+		Echvi_4158	0.33	+0.9
4,976,311	-		Echvi_4158	0.37	-1.4
4,976,371	-		Echvi_4158	0.45	-1.2
4,976,423	+		Echvi_4158	0.52	+1.1
4,976,427	+		Echvi_4158	0.53	-1.0
4,976,455	-		Echvi_4158	0.57	-0.5
4,976,471	-		Echvi_4158	0.59	-0.2
4,976,485	-		Echvi_4158	0.61	-1.3
4,976,529	+		Echvi_4158	0.67	-1.1
4,976,529	+		Echvi_4158	0.67	+0.7
4,976,530	-		Echvi_4158	0.68	+0.5
4,976,530	-		Echvi_4158	0.68	-1.3
4,976,530	-		Echvi_4158	0.68	-2.4
4,976,534	+		Echvi_4158	0.68	+0.2
4,976,535	-		Echvi_4158	0.68	-2.3
4,976,559	+		Echvi_4158	0.72	+3.4
4,976,562	+		Echvi_4158	0.72	+0.9
4,976,609	+		Echvi_4158	0.79	+1.2
4,976,610	-		Echvi_4158	0.79	-0.0
4,976,661	+		Echvi_4158	0.86	-1.2
4,976,661	+		Echvi_4158	0.86	+0.6
4,976,661	+		Echvi_4158	0.86	-1.6
4,976,662	-		Echvi_4158	0.86	-1.8
4,976,699	-				-1.2
4,976,699	-				-0.2
4,976,736	+				-0.1
4,976,740	-				-1.2
4,976,741	+				-2.8
4,976,746	-				-0.1
4,976,752	+				-1.4
4,976,768	+				-0.3
4,976,768	+				-0.5
4,976,769	-				-3.3
4,976,775	-				-3.5
4,976,837	+				+0.8
4,976,909	+		Echvi_4159	0.15	-0.2
4,976,910	-		Echvi_4159	0.15	-4.0
4,976,912	-		Echvi_4159	0.16	-0.2
4,976,912	-		Echvi_4159	0.16	-2.0
4,976,920	+		Echvi_4159	0.16	+1.2
4,976,921	-		Echvi_4159	0.17	-2.3
4,976,924	-		Echvi_4159	0.17	-3.4
4,976,926	-		Echvi_4159	0.17	-2.2
4,976,952	-		Echvi_4159	0.20	-1.3
4,976,965	+		Echvi_4159	0.21	-0.5
4,976,965	+		Echvi_4159	0.21	-0.9
4,976,969	+		Echvi_4159	0.21	+1.4
4,977,043	+		Echvi_4159	0.29	+0.6
4,977,043	+		Echvi_4159	0.29	-2.8
4,977,043	+		Echvi_4159	0.29	-0.5
4,977,044	-		Echvi_4159	0.29	-2.6
4,977,044	-		Echvi_4159	0.29	-0.7
4,977,044	-		Echvi_4159	0.29	-1.0
4,977,101	+		Echvi_4159	0.35	+0.1
4,977,177	+		Echvi_4159	0.42	-0.8
4,977,177	+		Echvi_4159	0.42	+0.4
4,977,177	+		Echvi_4159	0.42	-0.9
4,977,178	-		Echvi_4159	0.42	-3.7
4,977,179	+		Echvi_4159	0.42	-3.6
4,977,179	+		Echvi_4159	0.42	-0.6
4,977,185	-		Echvi_4159	0.43	-0.4
4,977,230	-		Echvi_4159	0.47	-2.3
4,977,230	-		Echvi_4159	0.47	+0.6
4,977,243	+		Echvi_4159	0.49	+0.3
4,977,255	+		Echvi_4159	0.50	-1.0
4,977,256	-		Echvi_4159	0.50	-1.8
4,977,262	+		Echvi_4159	0.51	+0.3
4,977,348	-		Echvi_4159	0.59	+1.1
4,977,404	-		Echvi_4159	0.65	-1.3
4,977,409	-		Echvi_4159	0.65	-2.6
4,977,436	+		Echvi_4159	0.68	-2.9
4,977,442	-		Echvi_4159	0.69	-2.3
4,977,446	-		Echvi_4159	0.69	-3.8
4,977,447	+		Echvi_4159	0.69	-1.2
4,977,447	+		Echvi_4159	0.69	-1.8
4,977,447	+		Echvi_4159	0.69	+1.2
4,977,447	+		Echvi_4159	0.69	-0.2
4,977,448	-		Echvi_4159	0.69	-2.3
4,977,448	-		Echvi_4159	0.69	-0.1
4,977,448	-		Echvi_4159	0.69	+0.1
4,977,448	-		Echvi_4159	0.69	-1.9
4,977,495	-		Echvi_4159	0.74	-5.6
4,977,530	-		Echvi_4159	0.77	-1.1
4,977,532	-		Echvi_4159	0.78	-1.1
4,977,576	+		Echvi_4159	0.82	-0.6
4,977,577	-		Echvi_4159	0.82	-1.0
4,977,580	-		Echvi_4159	0.82	-0.5
4,977,588	+		Echvi_4159	0.83	-1.9
4,977,611	+		Echvi_4159	0.86	-2.0
4,977,611	+		Echvi_4159	0.86	-0.2
4,977,653	+		Echvi_4159	0.90	-0.3
4,977,653	+		Echvi_4159	0.90	-2.2
4,977,675	+				+0.5
4,977,720	+				-2.3
4,977,721	-				-3.3
4,977,773	+				-0.8
4,977,774	-				-1.9
4,977,778	-				-1.2
4,977,778	-				-0.2
4,977,778	-				-1.1
4,977,786	-				-0.8
4,977,956	+				-2.3
4,977,957	-				-1.8
4,977,964	+				-2.4
4,977,998	-				+0.1
4,978,017	-				-0.6
4,978,043	+				+0.8
4,978,049	-				-1.2
4,978,080	-				-1.1
4,978,127	+				-1.5
4,978,127	+				+0.9
4,978,143	-				+2.8
4,978,155	-		Echvi_4160	0.12	+0.6
4,978,340	+		Echvi_4160	0.52	-0.9
4,978,340	+		Echvi_4160	0.52	+0.2
4,978,340	+		Echvi_4160	0.52	-0.3
4,978,340	+		Echvi_4160	0.52	-0.9
4,978,340	+		Echvi_4160	0.52	-2.3
4,978,340	+		Echvi_4160	0.52	-0.2
4,978,340	+		Echvi_4160	0.52	+0.6
4,978,340	+		Echvi_4160	0.52	+1.5
4,978,341	-		Echvi_4160	0.52	+1.5
4,978,341	-		Echvi_4160	0.52	+0.2
4,978,341	-		Echvi_4160	0.52	+0.0
4,978,342	+		Echvi_4160	0.53	-1.3
4,978,342	+		Echvi_4160	0.53	-1.1
4,978,342	+		Echvi_4160	0.53	+0.5
4,978,342	+		Echvi_4160	0.53	-1.7
4,978,342	+		Echvi_4160	0.53	-0.5
4,978,343	-		Echvi_4160	0.53	+0.5
4,978,343	-		Echvi_4160	0.53	-0.1
4,978,343	-		Echvi_4160	0.53	-0.7
4,978,343	-		Echvi_4160	0.53	+0.2
4,978,343	-		Echvi_4160	0.53	-1.6
4,978,343	-		Echvi_4160	0.53	-1.5
4,978,343	-		Echvi_4160	0.53	-0.3
4,978,347	+		Echvi_4160	0.54	-0.7
4,978,350	-		Echvi_4160	0.54	-0.3
4,978,394	+		Echvi_4160	0.64	+0.1
4,978,450	+		Echvi_4160	0.76	-0.4
4,978,451	-		Echvi_4160	0.76	+0.7
4,978,567	-				+0.2
4,978,567	-				-0.1
4,978,571	+				-0.7
4,978,572	-				+0.4
4,978,584	-				-0.1
4,978,593	+				-1.3
4,978,594	-				+0.8
4,978,594	-				+0.2
4,978,594	-				-1.0
4,978,629	+		Echvi_4161	0.11	-0.8
4,978,633	+		Echvi_4161	0.12	-0.6
4,978,716	+		Echvi_4161	0.31	+1.5