Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3909

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,671,764	+		Echvi_3908	0.78	-0.4
4,671,764	+		Echvi_3908	0.78	+1.2
4,671,764	+		Echvi_3908	0.78	-1.3
4,671,764	+				+1.8
4,671,774	+		Echvi_3908	0.79	+1.8
4,671,774	+		Echvi_3908	0.79	+0.7
4,671,775	-		Echvi_3908	0.79	-0.8
4,671,817	+		Echvi_3908	0.81	+0.1
4,671,818	-		Echvi_3908	0.81	-0.5
4,671,818	-		Echvi_3908	0.81	+1.0
4,671,838	+		Echvi_3908	0.81	+0.5
4,671,838	+		Echvi_3908	0.81	+1.3
4,671,841	+		Echvi_3908	0.82	-1.0
4,671,842	-		Echvi_3908	0.82	+1.4
4,672,002	-		Echvi_3908	0.89	-1.1
4,672,028	-		Echvi_3908	0.90	-0.2
4,672,028	-		Echvi_3908	0.90	-0.5
4,672,028	-		Echvi_3908	0.90	+0.4
4,672,051	+				-1.2
4,672,053	+				+0.5
4,672,054	-				-0.1
4,672,054	-				+0.3
4,672,084	+				+0.5
4,672,227	+				-0.2
4,672,240	-				+0.7
4,672,251	+				-1.0
4,672,252	-				-3.4
4,672,282	+				-0.8
4,672,283	-				-1.6
4,672,283	-				+0.2
4,672,283	-				-0.3
4,672,313	+				+0.8
4,672,313	+				+1.1
4,672,314	-				-2.8
4,672,314	-				-0.2
4,672,314	-				+0.7
4,672,314	-				+0.7
4,672,317	+				+0.2
4,672,331	-				-0.3
4,672,504	+				+0.4
4,672,528	-				-0.6
4,672,568	+				-0.2
4,672,590	+				-0.5
4,672,591	-				-0.9
4,672,596	-				-0.2
4,672,606	+				+0.2
4,672,610	+				+0.4
4,672,611	-				+0.1
4,672,611	-				-0.1
4,672,611	-				-0.2
4,672,611	-				-3.1
4,672,611	-				+1.1
4,672,613	+				+0.2
4,672,613	+				-1.1
4,672,614	-				+0.7
4,672,614	-				+1.0
4,672,614	-				+1.8
4,672,617	+				+0.1
4,672,617	+				-1.3
4,672,617	+				-1.5
4,672,621	-				+0.9
4,672,627	+				-0.6
4,672,627	+				+0.1
4,672,628	-				-0.4
4,672,631	+				+0.5
4,672,637	+				-1.2
4,672,638	-				+0.2
4,672,638	-				-0.2
4,672,701	+				+0.8
4,672,703	+				+1.3
4,672,703	+				-1.2
4,672,709	+				-0.6
4,672,709	+				+0.1
4,672,709	+				+0.7
4,672,710	-				+0.7
4,672,765	+				+0.1
4,672,766	-				+0.5
4,672,784	-				-0.5
4,672,909	+		Echvi_3909	0.18	-0.1
4,672,909	+		Echvi_3909	0.18	-0.1
4,672,910	-		Echvi_3909	0.18	-2.5
4,672,966	+		Echvi_3909	0.22	+1.3
4,672,967	-		Echvi_3909	0.22	-2.6
4,673,060	+		Echvi_3909	0.29	-0.6
4,673,061	-		Echvi_3909	0.29	-0.5
4,673,087	+		Echvi_3909	0.30	+1.2
4,673,090	+		Echvi_3909	0.31	-0.8
4,673,090	+		Echvi_3909	0.31	-0.7
4,673,090	+		Echvi_3909	0.31	-0.2
4,673,090	+		Echvi_3909	0.31	-0.2
4,673,090	+		Echvi_3909	0.31	-0.1
4,673,091	-		Echvi_3909	0.31	-2.3
4,673,091	-		Echvi_3909	0.31	+1.0
4,673,091	-		Echvi_3909	0.31	-1.2
4,673,091	-		Echvi_3909	0.31	+0.8
4,673,102	+		Echvi_3909	0.32	+0.7
4,673,102	+		Echvi_3909	0.32	-0.2
4,673,102	+		Echvi_3909	0.32	-1.0
4,673,102	+		Echvi_3909	0.32	-0.0
4,673,102	+		Echvi_3909	0.32	-1.2
4,673,103	-		Echvi_3909	0.32	-2.8
4,673,103	-		Echvi_3909	0.32	+0.2
4,673,103	-		Echvi_3909	0.32	-0.4
4,673,126	-		Echvi_3909	0.33	-0.5
4,673,126	-		Echvi_3909	0.33	-1.7
4,673,126	-		Echvi_3909	0.33	-1.6
4,673,287	-		Echvi_3909	0.45	+0.1
4,673,315	+		Echvi_3909	0.47	-0.1
4,673,325	+		Echvi_3909	0.47	+1.1
4,673,326	-		Echvi_3909	0.47	-2.5
4,673,326	-		Echvi_3909	0.47	+0.2
4,673,326	-		Echvi_3909	0.47	+0.6
4,673,326	-		Echvi_3909	0.47	-0.8
4,673,326	-		Echvi_3909	0.47	+0.0
4,673,326	-		Echvi_3909	0.47	+0.5
4,673,461	+		Echvi_3909	0.57	+0.3
4,673,462	-		Echvi_3909	0.57	+0.8
4,673,465	+		Echvi_3909	0.57	+1.8
4,673,465	+		Echvi_3909	0.57	+0.5
4,673,466	-		Echvi_3909	0.57	-1.5
4,673,466	-		Echvi_3909	0.57	-0.3
4,673,466	-		Echvi_3909	0.57	-0.9
4,673,507	-		Echvi_3909	0.60	-0.6
4,673,525	+		Echvi_3909	0.62	-1.0
4,673,526	-		Echvi_3909	0.62	-0.0
4,673,534	-		Echvi_3909	0.62	+0.0
4,673,566	-		Echvi_3909	0.64	+1.1
4,673,627	+		Echvi_3909	0.69	-1.7
4,673,656	-		Echvi_3909	0.71	-0.5
4,673,825	+		Echvi_3909	0.83	+0.5
4,673,825	+		Echvi_3909	0.83	+0.5
4,673,826	-		Echvi_3909	0.83	+0.1
4,673,849	+		Echvi_3909	0.85	-1.5
4,673,849	+		Echvi_3909	0.85	-0.2
4,673,897	-		Echvi_3909	0.88	-0.7
4,673,905	+		Echvi_3909	0.89	-1.4
4,673,905	+		Echvi_3909	0.89	+2.2
4,673,905	+		Echvi_3909	0.89	-1.1
4,673,906	-		Echvi_3909	0.89	-0.1
4,673,926	+				+0.7
4,673,962	-				+0.5
4,673,976	+				-1.1
4,674,054	+				-0.2
4,674,054	+				-0.3
4,674,055	-				-0.7
4,674,072	+				+2.0
4,674,072	+				+0.7
4,674,073	-				+0.4
4,674,075	+				-0.3
4,674,075	+				+0.3
4,674,076	-				+0.2
4,674,080	+				+1.4
4,674,094	+				+1.2
4,674,112	+				-0.5
4,674,113	-				+0.6
4,674,120	-				+1.0
4,674,131	-				+0.7
4,674,133	+				+1.0
4,674,507	-		Echvi_3910	0.31	+2.1
4,674,507	-		Echvi_3910	0.31	+1.8
4,674,550	-		Echvi_3910	0.35	+1.6
4,674,550	-		Echvi_3910	0.35	+1.0
4,674,552	+		Echvi_3910	0.36	+1.8
4,674,552	+		Echvi_3910	0.36	-1.2
4,674,553	-		Echvi_3910	0.36	+1.9
4,674,575	+		Echvi_3910	0.38	-0.9
4,674,575	+		Echvi_3910	0.38	-0.2
4,674,575	+		Echvi_3910	0.38	+1.4
4,674,576	-		Echvi_3910	0.38	+2.4
4,674,618	+		Echvi_3910	0.43	+0.1
4,674,618	+		Echvi_3910	0.43	+0.5
4,674,643	+		Echvi_3910	0.46	+0.4
4,674,644	-		Echvi_3910	0.46	+1.6
4,674,760	+		Echvi_3910	0.59	+1.9
4,674,850	+		Echvi_3910	0.69	-1.2
4,674,850	+		Echvi_3910	0.69	+0.5
4,674,850	+		Echvi_3910	0.69	+1.3
4,674,850	+		Echvi_3910	0.69	+0.2
4,674,850	+		Echvi_3910	0.69	-0.8
4,674,850	+		Echvi_3910	0.69	+1.0
4,674,850	+		Echvi_3910	0.69	-1.1
4,674,850	+		Echvi_3910	0.69	+0.6
4,674,850	+		Echvi_3910	0.69	+0.2
4,674,850	+		Echvi_3910	0.69	-0.5
4,674,851	-		Echvi_3910	0.69	+1.2
4,674,851	-		Echvi_3910	0.69	+1.3
4,674,851	-		Echvi_3910	0.69	+2.5
4,674,851	-		Echvi_3910	0.69	+1.6
4,674,860	+		Echvi_3910	0.70	+0.7
4,675,033	+		Echvi_3910	0.89	+0.9
4,675,034	-		Echvi_3910	0.89	+1.3
4,675,034	-		Echvi_3910	0.89	+2.1