Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3802

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,536,119	+		Echvi_3801	0.60	+1.3
4,536,166	+		Echvi_3801	0.61	+1.0
4,536,166	+		Echvi_3801	0.61	+0.7
4,536,167	-		Echvi_3801	0.62	+0.2
4,536,168	+		Echvi_3801	0.62	+1.4
4,536,192	+		Echvi_3801	0.63	+2.1
4,536,211	+		Echvi_3801	0.63	+0.9
4,536,232	+		Echvi_3801	0.64	+0.7
4,536,239	-		Echvi_3801	0.64	+0.0
4,536,298	+		Echvi_3801	0.67	+1.9
4,536,304	+		Echvi_3801	0.67	+1.7
4,536,409	+		Echvi_3801	0.71	+1.4
4,536,409	+		Echvi_3801	0.71	+1.5
4,536,410	-		Echvi_3801	0.72	+1.0
4,536,410	-		Echvi_3801	0.72	+0.9
4,536,410	-		Echvi_3801	0.72	+2.0
4,536,410	-		Echvi_3801	0.72	+1.2
4,536,410	-		Echvi_3801	0.72	+1.0
4,536,473	-		Echvi_3801	0.74	+1.3
4,536,476	-		Echvi_3801	0.74	+0.9
4,536,595	+		Echvi_3801	0.79	+2.3
4,536,595	+		Echvi_3801	0.79	+1.3
4,536,596	-		Echvi_3801	0.79	+1.7
4,536,596	-		Echvi_3801	0.79	-0.6
4,536,596	-		Echvi_3801	0.79	+0.9
4,536,596	-		Echvi_3801	0.79	+0.6
4,536,598	-		Echvi_3801	0.79	+1.2
4,536,598	-		Echvi_3801	0.79	+2.6
4,536,598	-		Echvi_3801	0.79	-0.6
4,536,650	+		Echvi_3801	0.81	+1.8
4,536,650	+		Echvi_3801	0.81	+2.3
4,536,672	-		Echvi_3801	0.82	+1.0
4,536,692	+		Echvi_3801	0.83	+1.1
4,536,693	-		Echvi_3801	0.83	+0.7
4,536,699	-		Echvi_3801	0.83	-2.3
4,536,699	-		Echvi_3801	0.83	+0.6
4,536,720	+		Echvi_3801	0.84	+0.2
4,536,782	+		Echvi_3801	0.87	+3.4
4,536,804	+		Echvi_3801	0.88	+2.0
4,536,805	-				+0.2
4,536,822	-		Echvi_3801	0.88	-1.3
4,536,928	+				+1.2
4,536,929	-				-2.3
4,536,929	-				-2.4
4,536,930	+				+1.3
4,536,930	+				+1.4
4,536,931	-				+1.2
4,536,931	-				-1.1
4,536,931	-				+1.6
4,536,931	-				-0.7
4,536,931	-				-0.1
4,536,931	-				+1.8
4,536,931	-				+0.5
4,536,933	-				+0.9
4,536,933	-				+0.8
4,536,933	-				+2.0
4,536,933	-				+0.7
4,536,960	+				+0.8
4,536,979	+				+1.2
4,537,024	+				+3.1
4,537,025	-				+0.4
4,537,079	+				+1.3
4,537,102	+				+1.3
4,537,102	+				+1.4
4,537,103	-				+0.9
4,537,103	-				+0.1
4,537,103	-				+0.2
4,537,111	+				+0.8
4,537,112	-				-0.5
4,537,197	+		Echvi_3802	0.11	+2.8
4,537,198	-		Echvi_3802	0.11	+0.7
4,537,198	-		Echvi_3802	0.11	+0.7
4,537,207	-		Echvi_3802	0.12	+1.7
4,537,225	+		Echvi_3802	0.14	+1.2
4,537,247	+		Echvi_3802	0.17	+1.1
4,537,272	-		Echvi_3802	0.20	-0.2
4,537,272	-		Echvi_3802	0.20	+2.8
4,537,295	+		Echvi_3802	0.23	+1.5
4,537,295	+		Echvi_3802	0.23	+1.1
4,537,296	-		Echvi_3802	0.23	+0.5
4,537,300	-		Echvi_3802	0.23	+0.3
4,537,300	-		Echvi_3802	0.23	+1.4
4,537,300	-		Echvi_3802	0.23	-0.2
4,537,326	+		Echvi_3802	0.26	+1.1
4,537,326	+		Echvi_3802	0.26	+0.6
4,537,326	+		Echvi_3802	0.26	+1.3
4,537,327	-		Echvi_3802	0.26	-0.5
4,537,327	-		Echvi_3802	0.26	+2.0
4,537,358	+		Echvi_3802	0.30	+2.5
4,537,358	+		Echvi_3802	0.30	+0.8
4,537,359	-		Echvi_3802	0.30	+0.3
4,537,359	-		Echvi_3802	0.30	-0.2
4,537,361	+		Echvi_3802	0.31	+1.5
4,537,361	+		Echvi_3802	0.31	+1.8
4,537,382	+		Echvi_3802	0.33	+1.2
4,537,420	+		Echvi_3802	0.38	+1.4
4,537,421	-		Echvi_3802	0.38	+0.1
4,537,421	-		Echvi_3802	0.38	+1.0
4,537,530	+		Echvi_3802	0.51	+1.3
4,537,546	-		Echvi_3802	0.53	-0.3
4,537,546	-		Echvi_3802	0.53	+0.2
4,537,627	+		Echvi_3802	0.63	+1.0
4,537,627	+		Echvi_3802	0.63	+1.4
4,537,627	+		Echvi_3802	0.63	+1.8
4,537,628	-		Echvi_3802	0.63	+1.1
4,537,628	-		Echvi_3802	0.63	-0.2
4,537,630	+		Echvi_3802	0.63	+1.7
4,537,631	-		Echvi_3802	0.63	+2.1
4,537,631	-		Echvi_3802	0.63	+0.6
4,537,632	+		Echvi_3802	0.64	-0.5
4,537,632	+		Echvi_3802	0.64	+1.9
4,537,632	+		Echvi_3802	0.64	+1.2
4,537,632	+		Echvi_3802	0.64	+2.2
4,537,632	+		Echvi_3802	0.64	+0.1
4,537,632	+		Echvi_3802	0.64	+1.1
4,537,632	+		Echvi_3802	0.64	+1.7
4,537,633	-		Echvi_3802	0.64	-0.3
4,537,633	-		Echvi_3802	0.64	+0.8
4,537,633	-		Echvi_3802	0.64	+1.3
4,537,633	-		Echvi_3802	0.64	+0.7
4,537,633	-		Echvi_3802	0.64	+0.6
4,537,633	-		Echvi_3802	0.64	-2.3
4,537,670	+		Echvi_3802	0.68	+0.3
4,537,670	+		Echvi_3802	0.68	+2.4
4,537,670	+		Echvi_3802	0.68	+1.7
4,537,670	+		Echvi_3802	0.68	+1.3
4,537,670	+		Echvi_3802	0.68	+0.5
4,537,671	-		Echvi_3802	0.68	+1.8
4,537,671	-		Echvi_3802	0.68	-0.2
4,537,679	+		Echvi_3802	0.69	+2.2
4,537,680	-		Echvi_3802	0.69	-0.3
4,537,742	+		Echvi_3802	0.77	-0.4
4,537,743	-		Echvi_3802	0.77	-1.3
4,537,743	-		Echvi_3802	0.77	+1.4
4,537,743	-		Echvi_3802	0.77	+1.8
4,537,743	-		Echvi_3802	0.77	+0.2
4,537,746	+		Echvi_3802	0.77	+1.7
4,537,746	+		Echvi_3802	0.77	+1.1
4,537,746	+		Echvi_3802	0.77	+1.8
4,537,746	+		Echvi_3802	0.77	+0.4
4,537,746	+		Echvi_3802	0.77	+0.5
4,537,746	+		Echvi_3802	0.77	+1.7
4,537,747	-		Echvi_3802	0.77	-1.0
4,537,747	-		Echvi_3802	0.77	+0.7
4,537,751	+		Echvi_3802	0.78	+2.8
4,537,751	+		Echvi_3802	0.78	+1.2
4,537,752	-		Echvi_3802	0.78	+1.7
4,537,752	-		Echvi_3802	0.78	-0.8
4,537,752	-		Echvi_3802	0.78	+1.2
4,537,759	+		Echvi_3802	0.79	+1.9
4,537,760	-		Echvi_3802	0.79	-3.1
4,537,786	+		Echvi_3802	0.82	+3.6
4,537,787	-		Echvi_3802	0.82	+0.1
4,537,893	+				+1.3
4,537,894	-				-0.8
4,537,894	-				+2.0
4,537,935	-				+0.4
4,537,938	+				+2.2
4,537,942	+				+1.0
4,537,943	-				-1.0
4,537,954	-				+1.8
4,537,971	+				+2.2
4,537,972	-				-0.8
4,537,972	-				+0.2
4,537,976	+				+0.6
4,538,006	-				-0.9
4,538,020	+				+3.2
4,538,020	+				+0.4
4,538,026	-				-0.3
4,538,078	-				-0.0
4,538,133	-				-0.8
4,538,133	-				-1.9
4,538,133	-				-0.4
4,538,137	+				+0.8
4,538,137	+				+1.4
4,538,138	-				+0.8
4,538,173	-				+0.2
4,538,262	+				+1.5
4,538,263	-				+0.3
4,538,263	-				+1.1
4,538,287	-				-0.4
4,538,537	-				+0.2
4,538,579	+				-0.0
4,538,635	-				-0.1
4,538,703	-				-0.1
4,538,703	-				-0.7
4,538,706	+				-0.8
4,538,707	-				+1.6
4,538,707	-				+0.5
4,538,707	-				+0.8
4,538,715	+				-0.3
4,538,726	-				+1.0
4,538,740	-				+1.1