Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3787

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,517,527	+		Echvi_3786	0.48	+1.7
4,517,528	-		Echvi_3786	0.48	+2.2
4,517,547	+		Echvi_3786	0.49	+2.6
4,517,584	-		Echvi_3786	0.52	+1.5
4,517,608	+		Echvi_3786	0.54	+1.5
4,517,608	+		Echvi_3786	0.54	-0.0
4,517,608	+		Echvi_3786	0.54	+1.8
4,517,609	-		Echvi_3786	0.54	+2.2
4,517,609	-		Echvi_3786	0.54	+1.9
4,517,609	-		Echvi_3786	0.54	+1.2
4,517,651	+		Echvi_3786	0.57	+1.3
4,517,653	+		Echvi_3786	0.57	+1.5
4,517,659	+		Echvi_3786	0.58	+1.8
4,517,659	+		Echvi_3786	0.58	+1.6
4,517,735	-		Echvi_3786	0.63	+2.5
4,517,743	+		Echvi_3786	0.64	+1.4
4,517,782	+		Echvi_3786	0.66	+1.8
4,517,961	-		Echvi_3786	0.79	+1.9
4,517,961	-		Echvi_3786	0.79	+1.1
4,517,961	-		Echvi_3786	0.79	+1.5
4,518,067	+		Echvi_3786	0.87	-1.2
4,518,067	+		Echvi_3786	0.87	+2.1
4,518,068	-		Echvi_3786	0.87	+2.0
4,518,089	+		Echvi_3786	0.88	+2.8
4,518,089	+		Echvi_3786	0.88	+1.7
4,518,090	-		Echvi_3786	0.88	-0.8
4,518,090	-		Echvi_3786	0.88	+1.2
4,518,090	-		Echvi_3786	0.88	+1.8
4,518,212	-				+1.8
4,518,229	-				+1.6
4,518,229	-				+1.7
4,518,229	-				+2.4
4,518,262	+				+0.6
4,518,315	+				+1.1
4,518,332	+				-1.4
4,518,353	+				+1.7
4,518,393	+				+2.0
4,518,393	+				+0.2
4,518,393	+				+1.6
4,518,393	+				+2.6
4,518,519	+				+2.1
4,518,550	+				-0.0
4,518,666	+		Echvi_3787	0.14	+1.8
4,518,744	+		Echvi_3787	0.18	+1.5
4,518,749	+		Echvi_3787	0.19	+3.5
4,518,848	+		Echvi_3787	0.24	+2.0
4,518,858	+		Echvi_3787	0.24	+2.7
4,518,902	+		Echvi_3787	0.27	-0.3
4,518,902	+		Echvi_3787	0.27	+2.4
4,518,911	+		Echvi_3787	0.27	+1.4
4,518,911	+		Echvi_3787	0.27	+3.6
4,518,911	+		Echvi_3787	0.27	+2.3
4,518,919	+		Echvi_3787	0.28	+1.8
4,518,919	+		Echvi_3787	0.28	+1.7
4,518,923	+		Echvi_3787	0.28	+0.2
4,518,923	+		Echvi_3787	0.28	+1.5
4,519,003	+		Echvi_3787	0.32	+0.2
4,519,035	+		Echvi_3787	0.34	+1.7
4,519,146	-		Echvi_3787	0.40	+0.2
4,519,239	+		Echvi_3787	0.45	+1.2
4,519,239	+		Echvi_3787	0.45	+1.0
4,519,240	-		Echvi_3787	0.45	-0.4
4,519,241	+		Echvi_3787	0.45	+1.6
4,519,469	-		Echvi_3787	0.57	-1.7
4,519,520	+		Echvi_3787	0.60	+1.5
4,519,520	+		Echvi_3787	0.60	+1.5
4,519,521	-		Echvi_3787	0.60	-3.2
4,519,546	+		Echvi_3787	0.61	+2.2
4,519,546	+		Echvi_3787	0.61	+2.9
4,519,583	-		Echvi_3787	0.63	-3.4
4,519,623	+		Echvi_3787	0.65	+2.4
4,519,623	+		Echvi_3787	0.65	+1.1
4,519,624	-		Echvi_3787	0.65	-0.4
4,519,624	-		Echvi_3787	0.65	+0.2
4,519,625	+		Echvi_3787	0.66	+1.6
4,519,626	-		Echvi_3787	0.66	-1.5
4,519,658	-		Echvi_3787	0.67	-0.2
4,519,658	-		Echvi_3787	0.67	-1.0
4,519,658	-		Echvi_3787	0.67	+0.7
4,519,692	-		Echvi_3787	0.69	+0.6
4,519,695	+		Echvi_3787	0.69	+0.9
4,519,695	+		Echvi_3787	0.69	+1.2
4,519,696	-		Echvi_3787	0.69	-0.9
4,519,696	-		Echvi_3787	0.69	-0.4
4,519,710	-		Echvi_3787	0.70	-0.3
4,519,747	+		Echvi_3787	0.72	+1.6
4,519,747	+		Echvi_3787	0.72	+1.4
4,519,747	+		Echvi_3787	0.72	+3.0
4,519,747	+		Echvi_3787	0.72	+2.2
4,519,747	+		Echvi_3787	0.72	+2.0
4,519,748	-		Echvi_3787	0.72	-0.6
4,519,758	+		Echvi_3787	0.73	+2.2
4,519,759	-		Echvi_3787	0.73	+0.5
4,519,759	-		Echvi_3787	0.73	-0.5
4,519,832	-		Echvi_3787	0.77	-0.7
4,519,911	+		Echvi_3787	0.81	+2.0
4,519,912	-		Echvi_3787	0.81	+0.8
4,519,912	-		Echvi_3787	0.81	-2.0
4,519,914	+		Echvi_3787	0.81	+1.4
4,519,964	-		Echvi_3787	0.84	-0.9
4,519,969	+		Echvi_3787	0.84	+1.9
4,519,969	+		Echvi_3787	0.84	+2.3
4,519,969	+		Echvi_3787	0.84	+2.4
4,519,969	+		Echvi_3787	0.84	+1.8
4,519,969	+		Echvi_3787	0.84	+1.5
4,519,969	+		Echvi_3787	0.84	+1.7
4,519,969	+		Echvi_3787	0.84	+1.9
4,519,970	-		Echvi_3787	0.84	-2.0
4,519,970	-		Echvi_3787	0.84	-1.1
4,519,973	+		Echvi_3787	0.84	+2.9
4,519,973	+		Echvi_3787	0.84	+3.2
4,519,973	+		Echvi_3787	0.84	+1.7
4,519,974	-		Echvi_3787	0.84	-0.4
4,520,218	+				+1.9
4,520,218	+				+1.0
4,520,219	-				+0.1
4,520,219	-				-0.2
4,520,219	-				+0.8
4,520,220	+				+2.1
4,520,220	+				+1.8
4,520,221	-				-1.4
4,520,221	-				-1.5
4,520,278	-				-2.4
4,520,352	+				+0.8
4,520,364	+				+0.7
4,520,364	+				+1.1
4,520,364	+				+1.1
4,520,560	+		Echvi_3788	0.27	+2.0
4,520,560	+		Echvi_3788	0.27	+1.7
4,520,561	-		Echvi_3788	0.27	-2.0
4,520,597	-		Echvi_3788	0.31	-0.8
4,520,674	-		Echvi_3788	0.40	-1.0
4,520,674	-		Echvi_3788	0.40	-1.9
4,520,764	+		Echvi_3788	0.50	+1.4
4,520,764	+		Echvi_3788	0.50	-0.5
4,520,765	-		Echvi_3788	0.50	+1.1
4,520,786	-		Echvi_3788	0.52	-0.8
4,520,786	-		Echvi_3788	0.52	+0.9
4,520,786	-		Echvi_3788	0.52	+0.4
4,520,804	+		Echvi_3788	0.55	+1.7
4,520,833	-		Echvi_3788	0.58	+0.1
4,520,883	-		Echvi_3788	0.63	+0.6
4,520,921	+		Echvi_3788	0.68	+1.6
4,520,921	+		Echvi_3788	0.68	+1.6
4,520,958	+		Echvi_3788	0.72	+1.5
4,520,959	-		Echvi_3788	0.72	+0.1
4,520,976	-		Echvi_3788	0.74	+0.6
4,520,998	-		Echvi_3788	0.76	-1.1
4,521,117	-		Echvi_3788	0.90	+0.2
4,521,117	-		Echvi_3788	0.90	+0.4
4,521,117	-		Echvi_3788	0.90	-2.0
4,521,119	+				+2.4
4,521,119	+				-0.2
4,521,119	+				+3.4
4,521,119	+				+1.3
4,521,119	+				+1.9
4,521,120	-				+0.0
4,521,120	-				+0.8
4,521,120	-				-0.7
4,521,120	-				+0.8
4,521,120	-				+2.0
4,521,120	-				+0.4
4,521,120	-				+0.6
4,521,120	-				+0.4
4,521,120	-				+0.0
4,521,173	-				+1.1
4,521,215	+				+2.5