Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3678

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,381,270	-				-0.3
4,381,297	+				+0.6
4,381,380	+				-0.2
4,381,381	-				-0.6
4,381,387	-				+0.7
4,381,426	-				+0.9
4,381,436	-				+0.1
4,381,501	-				-0.8
4,381,557	-				+1.0
4,381,579	+				+0.6
4,381,580	-				-0.6
4,381,597	+				-2.1
4,381,599	+				+0.8
4,381,599	+				-0.8
4,381,600	-				-0.0
4,381,600	-				-0.2
4,381,602	+				-1.1
4,381,602	+				-1.7
4,381,673	-		Echvi_3677	0.18	+0.5
4,381,685	+		Echvi_3677	0.22	-0.5
4,381,686	-		Echvi_3677	0.22	-0.0
4,381,750	-		Echvi_3677	0.39	-0.8
4,381,758	+		Echvi_3677	0.42	+0.3
4,381,758	+		Echvi_3677	0.42	+0.6
4,381,760	+		Echvi_3677	0.42	-0.8
4,381,760	+		Echvi_3677	0.42	+0.2
4,381,760	+		Echvi_3677	0.42	-1.0
4,381,760	+		Echvi_3677	0.42	-0.8
4,381,760	+		Echvi_3677	0.42	+2.1
4,381,761	-		Echvi_3677	0.42	+0.7
4,381,761	-		Echvi_3677	0.42	-0.4
4,381,761	-		Echvi_3677	0.42	-1.2
4,381,769	+		Echvi_3677	0.45	-0.6
4,381,769	+		Echvi_3677	0.45	+0.0
4,381,770	-		Echvi_3677	0.45	+0.4
4,381,770	-		Echvi_3677	0.45	+2.0
4,381,792	-		Echvi_3677	0.51	+0.3
4,381,919	+		Echvi_3677	0.86	-2.3
4,381,920	-		Echvi_3677	0.86	+0.3
4,381,920	-		Echvi_3677	0.86	+0.2
4,382,002	+				+0.3
4,382,002	+				-0.7
4,382,003	-				+1.0
4,382,091	+				+0.7
4,382,101	-				+0.4
4,382,105	+				-0.5
4,382,106	-				+0.7
4,382,106	-				-1.2
4,382,107	+				-1.6
4,382,110	-				+0.7
4,382,110	-				-1.2
4,382,110	-				-1.3
4,382,112	+				-1.1
4,382,112	+				+0.3
4,382,113	-				+0.7
4,382,113	-				-0.8
4,382,209	-				+1.0
4,382,210	+				+0.5
4,382,211	-				-0.4
4,382,238	+				-0.7
4,382,320	+				+0.1
4,382,320	+				-1.3
4,382,380	+		Echvi_3678	0.12	+1.7
4,382,420	-		Echvi_3678	0.16	+0.1
4,382,420	-		Echvi_3678	0.16	+0.1
4,382,420	-		Echvi_3678	0.16	-2.1
4,382,484	-		Echvi_3678	0.22	-1.8
4,382,484	-		Echvi_3678	0.22	-0.7
4,382,505	+		Echvi_3678	0.24	-2.2
4,382,505	+		Echvi_3678	0.24	-0.5
4,382,520	-		Echvi_3678	0.25	+1.1
4,382,531	-		Echvi_3678	0.26	+1.0
4,382,531	-		Echvi_3678	0.26	-0.6
4,382,624	+		Echvi_3678	0.35	-0.2
4,382,665	+		Echvi_3678	0.38	-0.6
4,382,666	-		Echvi_3678	0.39	+0.5
4,382,677	-		Echvi_3678	0.40	-0.7
4,382,677	-		Echvi_3678	0.40	-1.5
4,382,682	+		Echvi_3678	0.40	-0.1
4,382,719	+		Echvi_3678	0.44	-1.2
4,382,719	+		Echvi_3678	0.44	-0.0
4,382,720	-		Echvi_3678	0.44	+0.5
4,382,734	+		Echvi_3678	0.45	-0.2
4,382,734	+		Echvi_3678	0.45	+0.2
4,382,742	+		Echvi_3678	0.46	+0.8
4,382,743	-		Echvi_3678	0.46	+0.7
4,382,805	+		Echvi_3678	0.52	+0.8
4,382,805	+		Echvi_3678	0.52	-1.3
4,382,805	+		Echvi_3678	0.52	-0.1
4,382,805	+		Echvi_3678	0.52	-1.2
4,382,806	-		Echvi_3678	0.52	-0.2
4,382,806	-		Echvi_3678	0.52	-0.8
4,382,838	+		Echvi_3678	0.55	-0.9
4,382,862	+		Echvi_3678	0.57	-0.3
4,382,863	-		Echvi_3678	0.57	+0.8
4,382,863	-		Echvi_3678	0.57	+0.6
4,382,964	+		Echvi_3678	0.66	-0.3
4,382,973	+		Echvi_3678	0.67	-2.0
4,382,974	-		Echvi_3678	0.67	-0.3
4,383,003	+		Echvi_3678	0.70	-1.2
4,383,004	-		Echvi_3678	0.70	-1.2
4,383,004	-		Echvi_3678	0.70	-0.2
4,383,018	-		Echvi_3678	0.72	+0.1
4,383,018	-		Echvi_3678	0.72	+0.1
4,383,031	-		Echvi_3678	0.73	+0.0
4,383,054	+		Echvi_3678	0.75	+0.6
4,383,054	+		Echvi_3678	0.75	-0.0
4,383,055	-		Echvi_3678	0.75	-0.2
4,383,108	-		Echvi_3678	0.80	-1.6
4,383,108	-		Echvi_3678	0.80	-1.3
4,383,149	+		Echvi_3678	0.84	-1.5
4,383,176	+		Echvi_3678	0.86	+1.8
4,383,176	+		Echvi_3678	0.86	+0.0
4,383,176	+		Echvi_3678	0.86	+0.3
4,383,176	+		Echvi_3678	0.86	-0.5
4,383,176	+		Echvi_3678	0.86	-0.5
4,383,176	+		Echvi_3678	0.86	+0.3
4,383,177	-		Echvi_3678	0.86	-0.1
4,383,239	+				+1.3
4,383,246	-				+0.2
4,383,253	+				+0.3
4,383,275	+				+0.8
4,383,275	+				+0.6
4,383,276	-				+0.4
4,383,276	-				+0.6
4,383,337	+				+0.3
4,383,349	+				-0.8
4,383,407	+				+0.8
4,383,431	+				+0.8
4,383,432	-				-0.7
4,383,432	-				+1.6
4,383,509	+				+0.2
4,383,509	+				-0.3
4,383,520	+				+0.2
4,383,520	+				-0.2
4,383,520	+				-0.5
4,383,520	+				-0.4
4,383,521	-				-0.1
4,383,529	+				+0.5
4,383,529	+				+0.4
4,383,530	-				+1.3
4,383,530	-				-0.5
4,383,530	-				-0.2
4,383,575	+				-1.0
4,383,617	+				+0.5
4,383,618	-				-0.1
4,383,695	+		Echvi_3679	0.18	+0.2
4,383,698	+		Echvi_3679	0.19	-0.5
4,383,698	+		Echvi_3679	0.19	+0.4
4,383,698	+		Echvi_3679	0.19	+0.2
4,383,699	-		Echvi_3679	0.19	-0.3
4,383,699	-		Echvi_3679	0.19	+0.7
4,383,700	+		Echvi_3679	0.19	-0.2
4,383,700	+		Echvi_3679	0.19	-0.2
4,383,701	-		Echvi_3679	0.19	-1.0
4,383,786	-		Echvi_3679	0.34	-2.1
4,383,786	-		Echvi_3679	0.34	-2.6
4,383,796	+		Echvi_3679	0.36	-1.8
4,383,796	+		Echvi_3679	0.36	-0.8
4,383,797	-		Echvi_3679	0.36	-1.2
4,383,838	+		Echvi_3679	0.44	-2.3
4,383,838	+		Echvi_3679	0.44	-0.3
4,383,898	+		Echvi_3679	0.54	+0.2
4,383,898	+		Echvi_3679	0.54	+0.2
4,383,898	+		Echvi_3679	0.54	-1.8
4,383,899	-		Echvi_3679	0.54	-0.8
4,383,899	-		Echvi_3679	0.54	-2.1
4,383,899	-		Echvi_3679	0.54	-1.6
4,383,899	-		Echvi_3679	0.54	-0.9
4,383,903	-		Echvi_3679	0.55	+1.2
4,383,903	-		Echvi_3679	0.55	+2.1
4,383,904	+		Echvi_3679	0.55	-0.1
4,383,905	-		Echvi_3679	0.55	-0.1
4,384,041	+		Echvi_3679	0.79	-2.1
4,384,042	-		Echvi_3679	0.79	+1.2
4,384,148	+				-0.0
4,384,148	+				+0.6
4,384,148	+				-0.5
4,384,157	+				-0.7
4,384,158	-				+0.6
4,384,160	+				-0.6
4,384,160	+				+0.2
4,384,160	+				-0.2
4,384,214	-				+0.2
4,384,214	-				-0.4
4,384,214	-				-0.6