Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3652

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,338,797	-		Echvi_3650	0.28	-2.8
4,338,821	+		Echvi_3650	0.31	-1.6
4,338,822	-		Echvi_3650	0.31	+0.2
4,338,822	-		Echvi_3650	0.31	-2.3
4,338,839	+		Echvi_3650	0.34	-3.1
4,338,875	+		Echvi_3650	0.38	-3.1
4,338,875	+		Echvi_3650	0.38	-3.0
4,338,876	-		Echvi_3650	0.38	-0.5
4,338,876	-		Echvi_3650	0.38	-2.6
4,338,878	-		Echvi_3650	0.39	-0.2
4,338,964	-		Echvi_3650	0.50	-2.2
4,338,964	-		Echvi_3650	0.50	-2.3
4,338,969	+		Echvi_3650	0.51	-1.8
4,338,970	-		Echvi_3650	0.51	-2.4
4,339,093	+		Echvi_3650	0.67	-3.8
4,339,094	-		Echvi_3650	0.67	-0.5
4,339,094	-		Echvi_3650	0.67	-0.7
4,339,095	+		Echvi_3650	0.67	-2.3
4,339,095	+		Echvi_3650	0.67	-3.5
4,339,095	+		Echvi_3650	0.67	+0.1
4,339,095	+		Echvi_3650	0.67	-3.9
4,339,095	+		Echvi_3650	0.67	-1.9
4,339,096	-		Echvi_3650	0.67	-3.0
4,339,096	-		Echvi_3650	0.67	-1.0
4,339,096	-		Echvi_3650	0.67	-1.5
4,339,096	-		Echvi_3650	0.67	-2.8
4,339,100	+		Echvi_3650	0.68	-2.9
4,339,125	+		Echvi_3650	0.71	-2.4
4,339,126	-		Echvi_3650	0.71	-3.7
4,339,201	-		Echvi_3650	0.81	-2.1
4,339,224	-		Echvi_3650	0.84	-2.3
4,339,224	-		Echvi_3650	0.84	-1.9
4,339,271	-				-2.3
4,339,316	-				-2.1
4,339,316	-				-2.9
4,339,346	-				-0.6
4,339,346	-				-0.8
4,339,385	-				-1.9
4,339,405	+				-0.3
4,339,405	+				+0.3
4,339,406	-				-2.2
4,339,418	-				-3.2
4,339,449	+		Echvi_3651	0.16	-0.8
4,339,450	-		Echvi_3651	0.16	-0.4
4,339,450	-		Echvi_3651	0.16	-2.5
4,339,471	+		Echvi_3651	0.21	+0.7
4,339,486	+		Echvi_3651	0.25	-0.2
4,339,498	+		Echvi_3651	0.28	-0.8
4,339,498	+		Echvi_3651	0.28	-0.5
4,339,498	+		Echvi_3651	0.28	+0.2
4,339,501	+		Echvi_3651	0.29	-0.2
4,339,502	-		Echvi_3651	0.29	-0.6
4,339,511	+		Echvi_3651	0.31	-1.0
4,339,511	+		Echvi_3651	0.31	+0.6
4,339,565	-		Echvi_3651	0.44	+0.8
4,339,567	-		Echvi_3651	0.45	-2.6
4,339,567	-		Echvi_3651	0.45	-0.5
4,339,606	+		Echvi_3651	0.55	-0.6
4,339,618	+		Echvi_3651	0.58	+2.8
4,339,619	-		Echvi_3651	0.58	+0.7
4,339,620	+		Echvi_3651	0.58	+0.4
4,339,620	+		Echvi_3651	0.58	-0.0
4,339,620	+		Echvi_3651	0.58	-1.9
4,339,620	+		Echvi_3651	0.58	+0.0
4,339,621	-		Echvi_3651	0.58	-2.4
4,339,621	-		Echvi_3651	0.58	+0.2
4,339,621	-		Echvi_3651	0.58	-3.0
4,339,621	-		Echvi_3651	0.58	-1.5
4,339,621	-		Echvi_3651	0.58	-4.0
4,339,651	+		Echvi_3651	0.66	+0.6
4,339,680	+		Echvi_3651	0.73	-0.0
4,339,776	+				-0.2
4,339,776	+				-0.2
4,339,776	+				+0.6
4,339,805	+				-1.2
4,339,806	-				-1.9
4,339,815	-				-2.8
4,339,853	+				-2.7
4,339,854	-		Echvi_3652	0.10	-1.9
4,339,854	-		Echvi_3652	0.10	-0.8
4,339,870	+		Echvi_3652	0.12	-4.1
4,339,871	-		Echvi_3652	0.13	-2.0
4,339,964	-		Echvi_3652	0.26	-3.4
4,340,036	+		Echvi_3652	0.37	-2.4
4,340,040	+		Echvi_3652	0.38	-2.6
4,340,060	+		Echvi_3652	0.41	-2.8
4,340,074	+		Echvi_3652	0.43	-1.3
4,340,075	-		Echvi_3652	0.43	+0.8
4,340,076	+		Echvi_3652	0.43	-1.6
4,340,076	+		Echvi_3652	0.43	-3.9
4,340,076	+		Echvi_3652	0.43	+1.8
4,340,122	-		Echvi_3652	0.50	-2.8
4,340,128	-		Echvi_3652	0.51	-3.9
4,340,161	-		Echvi_3652	0.56	-2.5
4,340,190	-		Echvi_3652	0.60	-1.0
4,340,202	+		Echvi_3652	0.62	-1.6
4,340,203	-		Echvi_3652	0.62	-0.8
4,340,203	-		Echvi_3652	0.62	-3.2
4,340,203	-		Echvi_3652	0.62	-2.6
4,340,204	+		Echvi_3652	0.62	-3.0
4,340,204	+		Echvi_3652	0.62	-3.4
4,340,204	+		Echvi_3652	0.62	-1.0
4,340,205	-		Echvi_3652	0.62	-2.6
4,340,205	-		Echvi_3652	0.62	-1.2
4,340,205	-		Echvi_3652	0.62	-2.6
4,340,205	-		Echvi_3652	0.62	-2.0
4,340,205	-		Echvi_3652	0.62	-4.0
4,340,247	+		Echvi_3652	0.69	-2.2
4,340,248	-		Echvi_3652	0.69	-0.5
4,340,267	+		Echvi_3652	0.72	-2.1
4,340,267	+		Echvi_3652	0.72	+0.2
4,340,268	-		Echvi_3652	0.72	-2.6
4,340,268	-		Echvi_3652	0.72	-3.8
4,340,350	+		Echvi_3652	0.84	-1.2
4,340,350	+		Echvi_3652	0.84	+0.1
4,340,351	-		Echvi_3652	0.84	+0.2
4,340,368	+		Echvi_3652	0.87	-2.0
4,340,369	-		Echvi_3652	0.87	-2.6
4,340,374	-		Echvi_3652	0.88	-3.7
4,340,374	-		Echvi_3652	0.88	-2.3
4,340,381	+		Echvi_3652	0.89	-1.9
4,340,398	-				+0.2
4,340,434	+				-1.6
4,340,435	-				-2.7
4,340,435	-				-1.2
4,340,463	-				-2.8
4,340,463	-				-2.3
4,340,463	-				-2.0
4,340,464	+				-1.0
4,340,464	+				-3.3
4,340,465	-				-0.2
4,340,465	-				-2.1
4,340,465	-				-3.3
4,340,465	-				-3.7
4,340,465	-				-0.5
4,340,482	+				-3.2
4,340,703	+		Echvi_3653	0.29	-3.9
4,340,719	-		Echvi_3653	0.30	-1.8
4,340,783	+		Echvi_3653	0.38	-2.6
4,340,791	-		Echvi_3653	0.39	-1.9
4,340,945	-		Echvi_3653	0.56	-3.2
4,340,976	+		Echvi_3653	0.60	-1.5
4,340,976	+		Echvi_3653	0.60	-4.2
4,340,976	+		Echvi_3653	0.60	-2.0
4,340,976	+		Echvi_3653	0.60	-3.0
4,340,977	-		Echvi_3653	0.60	-1.9
4,340,977	-		Echvi_3653	0.60	-2.9
4,341,131	+		Echvi_3653	0.78	-3.0
4,341,131	+		Echvi_3653	0.78	-1.5
4,341,131	+		Echvi_3653	0.78	-2.0
4,341,132	-		Echvi_3653	0.78	-1.2
4,341,172	+		Echvi_3653	0.82	-2.0
4,341,172	+		Echvi_3653	0.82	-0.8
4,341,172	+		Echvi_3653	0.82	-2.4
4,341,172	+		Echvi_3653	0.82	-3.4
4,341,173	-		Echvi_3653	0.82	-1.6
4,341,173	-		Echvi_3653	0.82	+0.2
4,341,194	+		Echvi_3653	0.85	-2.6
4,341,226	+		Echvi_3653	0.88	+0.1
4,341,226	+		Echvi_3653	0.88	-3.2
4,341,227	-		Echvi_3653	0.89	-3.3
4,341,242	+				-1.8
4,341,262	+				-1.3
4,341,262	+				-2.2
4,341,263	-				-3.0
4,341,263	-				-0.5
4,341,269	-				-0.8
4,341,269	-				-1.6
4,341,275	+				-1.4
4,341,286	+				-0.5
4,341,287	-				-1.0
4,341,421	-		Echvi_3654	0.18	+0.6
4,341,421	-		Echvi_3654	0.18	+0.7
4,341,424	+		Echvi_3654	0.19	+1.3
4,341,427	-		Echvi_3654	0.20	-0.2
4,341,427	-		Echvi_3654	0.20	+0.1
4,341,457	-		Echvi_3654	0.27	-1.2
4,341,457	-		Echvi_3654	0.27	+1.2