Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2444

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,900,412	+				+2.8
2,900,523	+				-2.1
2,900,523	+				+2.2
2,900,550	+				+2.5
2,900,551	-				+0.4
2,900,551	-				-0.5
2,900,586	+				+1.8
2,900,633	-				-0.3
2,900,658	+				+1.6
2,900,659	-				-1.8
2,900,667	+				+1.3
2,900,731	-		Echvi_2442	0.11	-2.1
2,900,767	+		Echvi_2442	0.20	+0.3
2,900,767	+		Echvi_2442	0.20	-3.0
2,900,767	+		Echvi_2442	0.20	-1.0
2,900,768	-		Echvi_2442	0.20	-1.6
2,900,768	-		Echvi_2442	0.20	+1.9
2,900,771	+		Echvi_2442	0.21	+0.1
2,900,771	+		Echvi_2442	0.21	-0.2
2,900,771	+		Echvi_2442	0.21	-1.8
2,900,771	+		Echvi_2442	0.21	-0.2
2,900,771	+		Echvi_2442	0.21	-0.5
2,900,771	+		Echvi_2442	0.21	-1.4
2,900,771	+		Echvi_2442	0.21	-3.5
2,900,771	+		Echvi_2442	0.21	-0.4
2,900,771	+		Echvi_2442	0.21	-0.2
2,900,771	+		Echvi_2442	0.21	-1.2
2,900,771	+		Echvi_2442	0.21	-2.0
2,900,771	+		Echvi_2442	0.21	-1.0
2,900,771	+		Echvi_2442	0.21	-0.6
2,900,772	-		Echvi_2442	0.21	-3.2
2,900,772	-		Echvi_2442	0.21	+0.3
2,900,772	-		Echvi_2442	0.21	-0.4
2,900,775	+		Echvi_2442	0.22	-0.8
2,900,775	+		Echvi_2442	0.22	-2.2
2,900,775	+		Echvi_2442	0.22	-0.1
2,900,775	+		Echvi_2442	0.22	-0.7
2,900,775	+		Echvi_2442	0.22	-0.7
2,900,775	+		Echvi_2442	0.22	-0.7
2,900,775	+		Echvi_2442	0.22	+0.6
2,900,775	+		Echvi_2442	0.22	-0.7
2,900,775	+		Echvi_2442	0.22	-0.7
2,900,775	+		Echvi_2442	0.22	-2.3
2,900,775	+		Echvi_2442	0.22	-1.3
2,900,776	-		Echvi_2442	0.22	-1.9
2,900,776	-		Echvi_2442	0.22	-3.2
2,900,776	-		Echvi_2442	0.22	-1.6
2,900,807	+		Echvi_2442	0.29	+0.1
2,900,807	+		Echvi_2442	0.29	-1.5
2,900,807	+		Echvi_2442	0.29	-3.5
2,900,819	-		Echvi_2442	0.32	-0.3
2,900,848	+		Echvi_2442	0.39	-1.6
2,900,848	+		Echvi_2442	0.39	-0.4
2,900,897	+		Echvi_2442	0.51	-0.3
2,900,898	-		Echvi_2442	0.51	-1.0
2,900,902	+		Echvi_2442	0.52	-1.3
2,900,903	-		Echvi_2442	0.53	-2.1
2,900,943	+		Echvi_2442	0.62	-1.0
2,900,943	+		Echvi_2442	0.62	+0.4
2,900,943	+		Echvi_2442	0.62	-1.1
2,900,944	-		Echvi_2442	0.63	-2.5
2,900,944	-		Echvi_2442	0.63	+0.8
2,900,945	+		Echvi_2442	0.63	-1.7
2,900,945	+		Echvi_2442	0.63	-1.7
2,900,946	-		Echvi_2442	0.63	-1.8
2,901,029	+		Echvi_2442	0.83	-0.4
2,901,029	+		Echvi_2442	0.83	+0.6
2,901,029	+		Echvi_2442	0.83	+2.6
2,901,033	+		Echvi_2442	0.84	-0.3
2,901,033	+		Echvi_2442	0.84	-2.6
2,901,033	+		Echvi_2442	0.84	-1.3
2,901,033	+		Echvi_2442	0.84	-1.3
2,901,033	+		Echvi_2442	0.84	+0.1
2,901,033	+		Echvi_2442	0.84	-1.5
2,901,034	-		Echvi_2442	0.84	-1.9
2,901,034	-		Echvi_2442	0.84	-1.7
2,901,072	+				-1.4
2,901,073	-				-0.4
2,901,075	-				-2.4
2,901,161	+		Echvi_2443	0.28	+2.7
2,901,162	-		Echvi_2443	0.28	-0.3
2,901,162	-		Echvi_2443	0.28	-2.4
2,901,162	-		Echvi_2443	0.28	-3.7
2,901,173	+		Echvi_2443	0.33	+1.5
2,901,174	-		Echvi_2443	0.33	-0.2
2,901,200	+		Echvi_2443	0.44	+0.8
2,901,201	-		Echvi_2443	0.44	-0.6
2,901,329	-				-1.0
2,901,353	+				-0.2
2,901,353	+				+0.5
2,901,360	-				-3.0
2,901,368	+				+1.1
2,901,368	+				+1.7
2,901,374	+				+2.0
2,901,409	+				+2.1
2,901,418	+				+1.8
2,901,418	+				+2.2
2,901,438	+				+2.6
2,901,439	-				+0.8
2,901,439	-				-0.5
2,901,439	-				-1.3
2,901,439	-				+0.3
2,901,440	+				+1.8
2,901,440	+				+1.7
2,901,440	+				+1.6
2,901,441	-				-1.6
2,901,441	-				-1.6
2,901,442	+				+2.7
2,901,442	+				+1.6
2,901,442	+				+2.0
2,901,442	+				+1.1
2,901,442	+				+2.7
2,901,442	+				+1.8
2,901,442	+				-0.0
2,901,442	+				+2.6
2,901,442	+				-0.2
2,901,443	-				-1.1
2,901,445	+				+1.7
2,901,446	-				+0.9
2,901,469	+		Echvi_2444	0.11	+0.7
2,901,469	+		Echvi_2444	0.11	+3.3
2,901,542	+		Echvi_2444	0.18	+2.2
2,901,566	+		Echvi_2444	0.20	+2.4
2,901,567	-		Echvi_2444	0.20	-0.7
2,901,618	+		Echvi_2444	0.25	+2.0
2,901,618	+		Echvi_2444	0.25	+2.0
2,901,620	+		Echvi_2444	0.26	+1.5
2,901,621	-		Echvi_2444	0.26	-0.2
2,901,649	+		Echvi_2444	0.28	+2.0
2,901,649	+		Echvi_2444	0.28	+1.5
2,901,650	-		Echvi_2444	0.28	+0.6
2,901,650	-		Echvi_2444	0.28	-1.6
2,901,650	-		Echvi_2444	0.28	-0.1
2,901,667	+		Echvi_2444	0.30	-1.1
2,901,667	+		Echvi_2444	0.30	+2.5
2,901,667	+		Echvi_2444	0.30	+2.1
2,901,704	+		Echvi_2444	0.34	+1.8
2,901,705	-		Echvi_2444	0.34	-0.3
2,901,743	+		Echvi_2444	0.38	+1.9
2,901,743	+		Echvi_2444	0.38	+1.8
2,901,779	-		Echvi_2444	0.41	-2.0
2,901,795	+		Echvi_2444	0.43	+2.5
2,901,795	+		Echvi_2444	0.43	+2.0
2,901,796	-		Echvi_2444	0.43	-2.5
2,901,799	+		Echvi_2444	0.43	+2.7
2,901,853	+		Echvi_2444	0.49	+2.0
2,901,853	+		Echvi_2444	0.49	+1.8
2,901,925	+		Echvi_2444	0.56	+2.5
2,901,925	+		Echvi_2444	0.56	+2.5
2,901,925	+		Echvi_2444	0.56	+1.3
2,901,926	-		Echvi_2444	0.56	-0.9
2,901,929	+		Echvi_2444	0.56	+2.4
2,901,996	+		Echvi_2444	0.63	+2.3
2,902,026	+		Echvi_2444	0.66	+1.8
2,902,079	-		Echvi_2444	0.71	-0.4
2,902,080	+		Echvi_2444	0.71	+2.1
2,902,080	+		Echvi_2444	0.71	+2.7
2,902,080	+		Echvi_2444	0.71	+2.5
2,902,080	+		Echvi_2444	0.71	+1.8
2,902,131	+		Echvi_2444	0.76	+1.6
2,902,161	-		Echvi_2444	0.79	-0.2
2,902,209	+		Echvi_2444	0.84	+3.5
2,902,210	-		Echvi_2444	0.84	-0.2
2,902,213	+		Echvi_2444	0.84	+3.1
2,902,214	-		Echvi_2444	0.84	-2.0
2,902,277	+				+2.4
2,902,310	+				+2.3
2,902,310	+				+2.4
2,902,311	-				-0.5
2,902,319	+				+2.0
2,902,319	+				+1.4
2,902,324	+				+2.4
2,902,349	+				+2.3
2,902,349	+				+2.2
2,902,349	+				+3.5
2,902,349	+				+2.2
2,902,350	-				-0.6
2,902,350	-				-1.5
2,902,353	+				+3.6
2,902,353	+				+0.8
2,902,421	+				-1.8
2,902,422	-				-1.3
2,902,422	-				-0.1
2,902,545	-				-0.9
2,902,573	-				-1.4
2,902,582	+				-1.7
2,902,597	+				-3.2
2,902,598	-				-1.6
2,902,601	-				-1.2
2,902,622	-				-0.9
2,902,685	-		Echvi_2445	0.11	-0.6
2,902,698	-		Echvi_2445	0.11	-1.1
2,902,701	+		Echvi_2445	0.11	-2.1
2,902,702	-		Echvi_2445	0.11	+1.7
2,902,759	+		Echvi_2445	0.13	+2.9
2,902,842	+		Echvi_2445	0.16	+0.1
2,902,843	-		Echvi_2445	0.16	+0.4
2,902,853	+		Echvi_2445	0.16	-0.5
2,902,853	+		Echvi_2445	0.16	-1.4
2,902,869	-		Echvi_2445	0.17	-2.1
2,902,907	+		Echvi_2445	0.18	-0.6
2,902,907	+		Echvi_2445	0.18	-1.7
2,902,908	-		Echvi_2445	0.18	+0.1
2,902,923	+		Echvi_2445	0.19	+0.9
2,902,937	-		Echvi_2445	0.19	-1.2
2,902,991	+		Echvi_2445	0.21	+0.9
2,903,051	-		Echvi_2445	0.23	+0.9
2,903,051	-		Echvi_2445	0.23	-1.9
2,903,100	-		Echvi_2445	0.25	-0.4
2,903,158	-		Echvi_2445	0.27	-1.0
2,903,158	-		Echvi_2445	0.27	-1.3
2,903,158	-		Echvi_2445	0.27	-1.7
2,903,194	-		Echvi_2445	0.28	-0.6
2,903,200	+		Echvi_2445	0.29	-0.4
2,903,200	+		Echvi_2445	0.29	-1.1
2,903,210	-		Echvi_2445	0.29	+0.6
2,903,210	-		Echvi_2445	0.29	-0.6
2,903,210	-		Echvi_2445	0.29	+1.9
2,903,210	-		Echvi_2445	0.29	-0.5
2,903,257	+		Echvi_2445	0.31	+1.2
2,903,258	-		Echvi_2445	0.31	-1.7
2,903,258	-		Echvi_2445	0.31	-2.5
2,903,285	+		Echvi_2445	0.31	-0.7
2,903,298	+		Echvi_2445	0.32	-2.1
2,903,298	+		Echvi_2445	0.32	-0.2
2,903,300	+		Echvi_2445	0.32	-2.4
2,903,300	+		Echvi_2445	0.32	-1.1
2,903,301	-		Echvi_2445	0.32	-1.1