Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2309

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,742,516	-				+1.6
2,742,516	-				-0.3
2,742,559	-				-1.2
2,742,559	-				-2.4
2,742,707	-		Echvi_2308	0.20	+0.2
2,742,712	+		Echvi_2308	0.21	-0.9
2,742,713	-		Echvi_2308	0.21	+0.7
2,742,713	-		Echvi_2308	0.21	+0.2
2,742,713	-		Echvi_2308	0.21	-2.3
2,742,714	+		Echvi_2308	0.21	+0.9
2,742,715	-		Echvi_2308	0.21	-0.7
2,742,715	-		Echvi_2308	0.21	-0.1
2,742,747	-		Echvi_2308	0.25	-0.7
2,742,815	+		Echvi_2308	0.33	-1.9
2,742,831	+		Echvi_2308	0.35	-0.1
2,742,831	+		Echvi_2308	0.35	-1.0
2,742,874	-		Echvi_2308	0.40	-0.1
2,742,892	+		Echvi_2308	0.43	-0.5
2,742,965	-		Echvi_2308	0.51	+0.2
2,742,974	+		Echvi_2308	0.53	+0.3
2,742,978	+		Echvi_2308	0.53	+0.6
2,742,979	-		Echvi_2308	0.53	+0.0
2,742,979	-		Echvi_2308	0.53	-1.7
2,743,029	-		Echvi_2308	0.59	+0.7
2,743,052	+		Echvi_2308	0.62	+1.2
2,743,074	-		Echvi_2308	0.65	-1.4
2,743,180	+		Echvi_2308	0.77	-0.1
2,743,183	+		Echvi_2308	0.78	-0.5
2,743,184	-		Echvi_2308	0.78	-0.7
2,743,219	+		Echvi_2308	0.82	-0.4
2,743,219	+		Echvi_2308	0.82	-0.8
2,743,235	+		Echvi_2308	0.84	-0.1
2,743,236	-		Echvi_2308	0.84	-1.3
2,743,309	-				+0.2
2,743,429	+				-1.0
2,743,430	-				+0.4
2,743,527	-				-0.9
2,743,544	-				+1.5
2,743,563	-				+2.0
2,743,563	-				+2.1
2,743,568	+				+1.0
2,743,568	+				+0.5
2,743,642	+		Echvi_2309	0.13	+1.6
2,743,643	-		Echvi_2309	0.13	+1.3
2,743,643	-		Echvi_2309	0.13	+2.4
2,743,643	-		Echvi_2309	0.13	+1.9
2,743,643	-		Echvi_2309	0.13	+1.6
2,743,643	-		Echvi_2309	0.13	+0.3
2,743,644	+		Echvi_2309	0.13	+0.9
2,743,645	-		Echvi_2309	0.14	+1.3
2,743,645	-		Echvi_2309	0.14	+2.2
2,743,646	+		Echvi_2309	0.14	+1.0
2,743,647	-		Echvi_2309	0.14	+2.4
2,743,647	-		Echvi_2309	0.14	+1.2
2,743,666	-		Echvi_2309	0.15	+1.7
2,743,693	-		Echvi_2309	0.17	+0.3
2,743,693	-		Echvi_2309	0.17	+1.0
2,743,703	+		Echvi_2309	0.17	+2.1
2,743,703	+		Echvi_2309	0.17	+2.3
2,743,703	+		Echvi_2309	0.17	+0.2
2,743,704	-		Echvi_2309	0.18	+1.9
2,743,708	+		Echvi_2309	0.18	+2.6
2,743,708	+		Echvi_2309	0.18	+2.4
2,743,708	+		Echvi_2309	0.18	+0.3
2,743,722	+		Echvi_2309	0.19	+2.7
2,743,723	-		Echvi_2309	0.19	+2.2
2,743,724	+		Echvi_2309	0.19	-0.4
2,743,769	-		Echvi_2309	0.22	+1.8
2,743,782	-		Echvi_2309	0.23	+0.1
2,743,790	-		Echvi_2309	0.23	+1.9
2,743,791	+		Echvi_2309	0.23	+1.7
2,743,827	+		Echvi_2309	0.26	+1.8
2,743,827	+		Echvi_2309	0.26	+2.2
2,743,827	+		Echvi_2309	0.26	+2.8
2,743,827	+		Echvi_2309	0.26	+2.0
2,743,827	+		Echvi_2309	0.26	+2.6
2,743,827	+		Echvi_2309	0.26	+0.9
2,743,828	-		Echvi_2309	0.26	+2.7
2,743,828	-		Echvi_2309	0.26	+1.3
2,743,828	-		Echvi_2309	0.26	+1.9
2,743,829	+		Echvi_2309	0.26	+2.7
2,743,830	-		Echvi_2309	0.26	+2.1
2,743,839	+		Echvi_2309	0.27	+2.1
2,743,845	+		Echvi_2309	0.27	+1.8
2,743,850	+		Echvi_2309	0.27	+2.4
2,743,850	+		Echvi_2309	0.27	+1.7
2,743,905	-		Echvi_2309	0.31	+1.3
2,743,978	+		Echvi_2309	0.36	+1.6
2,743,978	+		Echvi_2309	0.36	+1.4
2,744,007	-		Echvi_2309	0.38	+1.5
2,744,007	-		Echvi_2309	0.38	+1.3
2,744,011	+		Echvi_2309	0.38	+0.3
2,744,011	+		Echvi_2309	0.38	-0.2
2,744,011	+		Echvi_2309	0.38	+2.7
2,744,012	-		Echvi_2309	0.38	+0.8
2,744,012	-		Echvi_2309	0.38	+1.3
2,744,012	-		Echvi_2309	0.38	+0.1
2,744,012	-		Echvi_2309	0.38	+2.7
2,744,012	-		Echvi_2309	0.38	-0.4
2,744,012	-		Echvi_2309	0.38	+1.4
2,744,039	+		Echvi_2309	0.40	+0.7
2,744,058	-		Echvi_2309	0.41	+2.1
2,744,107	+		Echvi_2309	0.45	+1.8
2,744,108	-		Echvi_2309	0.45	+0.9
2,744,108	-		Echvi_2309	0.45	+4.4
2,744,151	-		Echvi_2309	0.48	+1.5
2,744,162	+		Echvi_2309	0.48	+0.5
2,744,184	-		Echvi_2309	0.50	+2.1
2,744,232	+		Echvi_2309	0.53	+1.8
2,744,237	+		Echvi_2309	0.53	+2.3
2,744,237	+		Echvi_2309	0.53	+2.6
2,744,242	+		Echvi_2309	0.54	+3.3
2,744,253	+		Echvi_2309	0.54	+2.7
2,744,254	-		Echvi_2309	0.55	+1.2
2,744,256	-		Echvi_2309	0.55	+1.1
2,744,286	+		Echvi_2309	0.57	+2.1
2,744,289	+		Echvi_2309	0.57	+1.5
2,744,289	+		Echvi_2309	0.57	+2.0
2,744,335	-		Echvi_2309	0.60	+1.5
2,744,335	-		Echvi_2309	0.60	+1.4
2,744,335	-		Echvi_2309	0.60	+2.0
2,744,336	+		Echvi_2309	0.60	+1.4
2,744,336	+		Echvi_2309	0.60	+1.7
2,744,336	+		Echvi_2309	0.60	+2.5
2,744,348	+		Echvi_2309	0.61	+3.3
2,744,349	-		Echvi_2309	0.61	+0.8
2,744,349	-		Echvi_2309	0.61	+2.0
2,744,425	-		Echvi_2309	0.66	+0.6
2,744,444	+		Echvi_2309	0.67	+1.7
2,744,530	+		Echvi_2309	0.73	+1.6
2,744,530	+		Echvi_2309	0.73	+2.2
2,744,531	-		Echvi_2309	0.73	+1.3
2,744,531	-		Echvi_2309	0.73	+3.1
2,744,534	+		Echvi_2309	0.73	-0.7
2,744,534	+		Echvi_2309	0.73	+2.6
2,744,535	-		Echvi_2309	0.73	-0.7
2,744,566	+		Echvi_2309	0.76	+2.2
2,744,811	+				+1.1
2,744,811	+				+0.1
2,744,812	-				+2.6
2,744,812	-				+0.8
2,744,812	-				+1.5
2,744,870	-				+1.0
2,744,870	-				+1.3
2,744,872	+				+0.3
2,744,873	-				+2.2
2,744,876	-				+2.3
2,744,895	-				+1.2
2,744,989	+				-0.9
2,745,026	+		Echvi_2310	0.20	+1.9
2,745,032	+		Echvi_2310	0.23	+0.6
2,745,064	+		Echvi_2310	0.37	-1.4
2,745,064	+		Echvi_2310	0.37	+1.0
2,745,065	-		Echvi_2310	0.38	-0.4
2,745,065	-		Echvi_2310	0.38	+1.0
2,745,068	+		Echvi_2310	0.39	+0.4
2,745,069	-		Echvi_2310	0.40	-1.9
2,745,090	-		Echvi_2310	0.49	-1.9