Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1499

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,720,185	-		Echvi_1498	0.62	-0.7
1,720,185	-		Echvi_1498	0.62	-2.7
1,720,199	-		Echvi_1498	0.63	+0.4
1,720,204	+		Echvi_1498	0.63	-0.8
1,720,205	-		Echvi_1498	0.63	+0.6
1,720,265	+		Echvi_1498	0.65	-0.1
1,720,265	+		Echvi_1498	0.65	-1.5
1,720,265	+		Echvi_1498	0.65	+0.8
1,720,265	+		Echvi_1498	0.65	+1.0
1,720,265	+		Echvi_1498	0.65	-0.2
1,720,266	-		Echvi_1498	0.65	+0.0
1,720,266	-		Echvi_1498	0.65	+0.1
1,720,266	-		Echvi_1498	0.65	-0.8
1,720,266	-		Echvi_1498	0.65	+1.3
1,720,266	-		Echvi_1498	0.65	+2.4
1,720,269	+		Echvi_1498	0.66	+0.0
1,720,269	+		Echvi_1498	0.66	-1.5
1,720,270	-		Echvi_1498	0.66	+2.0
1,720,270	-		Echvi_1498	0.66	-0.0
1,720,270	-		Echvi_1498	0.66	-0.5
1,720,502	+		Echvi_1498	0.75	+0.5
1,720,543	+		Echvi_1498	0.77	+0.8
1,720,543	+		Echvi_1498	0.77	+0.7
1,720,588	-		Echvi_1498	0.78	+0.7
1,720,604	+		Echvi_1498	0.79	+1.1
1,720,604	+		Echvi_1498	0.79	+0.8
1,720,604	+		Echvi_1498	0.79	-1.0
1,720,605	-		Echvi_1498	0.79	-0.8
1,720,619	+		Echvi_1498	0.80	+0.2
1,720,619	+		Echvi_1498	0.80	+0.3
1,720,619	+		Echvi_1498	0.80	-1.1
1,720,619	+		Echvi_1498	0.80	+1.2
1,720,619	+		Echvi_1498	0.80	+0.6
1,720,619	+		Echvi_1498	0.80	-0.8
1,720,620	-		Echvi_1498	0.80	+1.0
1,720,620	-		Echvi_1498	0.80	-0.3
1,720,620	-		Echvi_1498	0.80	-0.3
1,720,620	-		Echvi_1498	0.80	-1.8
1,720,620	-		Echvi_1498	0.80	-1.4
1,720,620	-		Echvi_1498	0.80	-0.4
1,720,639	+		Echvi_1498	0.80	+0.0
1,720,666	+		Echvi_1498	0.81	+0.6
1,720,669	+		Echvi_1498	0.82	-0.4
1,720,670	-		Echvi_1498	0.82	-0.8
1,720,857	+		Echvi_1498	0.89	+0.5
1,720,858	-		Echvi_1498	0.89	-0.6
1,720,861	+		Echvi_1498	0.89	-0.3
1,720,882	+				+0.5
1,720,882	+				-0.9
1,721,010	+				-0.2
1,721,070	+				-0.8
1,721,070	+				+0.8
1,721,070	+				-0.1
1,721,070	+				-0.6
1,721,070	+				+0.6
1,721,071	-				+0.1
1,721,071	-				-0.7
1,721,071	-				-2.2
1,721,074	+				+0.7
1,721,095	+				-0.7
1,721,096	-				+0.4
1,721,126	+				+0.3
1,721,161	+				-0.1
1,721,161	+				-1.1
1,721,162	-				+0.1
1,721,162	-				-0.4
1,721,162	-				+0.4
1,721,162	-				+1.7
1,721,162	-				+0.1
1,721,162	-				+0.4
1,721,442	-		Echvi_1499	0.31	+0.3
1,721,463	+		Echvi_1499	0.33	-0.3
1,721,463	+		Echvi_1499	0.33	-0.8
1,721,463	+		Echvi_1499	0.33	+0.2
1,721,463	+		Echvi_1499	0.33	+0.9
1,721,464	-		Echvi_1499	0.33	+0.5
1,721,532	+		Echvi_1499	0.40	+1.2
1,721,569	-		Echvi_1499	0.44	-2.1
1,721,570	+		Echvi_1499	0.44	+0.2
1,721,571	-		Echvi_1499	0.44	+0.8
1,721,571	-		Echvi_1499	0.44	-1.7
1,721,571	-		Echvi_1499	0.44	-0.3
1,721,600	-		Echvi_1499	0.47	+0.8
1,721,603	+		Echvi_1499	0.47	-2.2
1,721,603	+		Echvi_1499	0.47	-0.4
1,721,604	-		Echvi_1499	0.47	+0.6
1,721,604	-		Echvi_1499	0.47	+0.2
1,721,604	-		Echvi_1499	0.47	+0.0
1,721,604	-		Echvi_1499	0.47	+0.4
1,721,655	+		Echvi_1499	0.52	-0.2
1,721,655	+		Echvi_1499	0.52	-0.5
1,721,655	+		Echvi_1499	0.52	-0.7
1,721,655	+		Echvi_1499	0.52	-2.0
1,721,655	+		Echvi_1499	0.52	+1.2
1,721,655	+		Echvi_1499	0.52	-0.2
1,721,656	-		Echvi_1499	0.53	+1.4
1,721,656	-		Echvi_1499	0.53	-0.6
1,721,666	+		Echvi_1499	0.54	-2.9
1,721,666	+		Echvi_1499	0.54	+0.2
1,721,667	-		Echvi_1499	0.54	-0.2
1,721,667	-		Echvi_1499	0.54	+0.4
1,721,724	+		Echvi_1499	0.60	+2.5
1,721,724	+		Echvi_1499	0.60	+0.2
1,721,733	-		Echvi_1499	0.60	-0.7
1,721,733	-		Echvi_1499	0.60	+0.8
1,721,740	-		Echvi_1499	0.61	-0.7
1,721,740	-		Echvi_1499	0.61	+1.7
1,721,768	+		Echvi_1499	0.64	-0.2
1,721,836	-		Echvi_1499	0.71	-0.5
1,721,840	+		Echvi_1499	0.71	+1.0
1,721,854	+		Echvi_1499	0.73	+1.2
1,721,890	-		Echvi_1499	0.76	+1.1
1,721,939	+		Echvi_1499	0.81	+0.5
1,721,981	+		Echvi_1499	0.86	-0.6
1,721,982	-		Echvi_1499	0.86	+0.1
1,721,991	-		Echvi_1499	0.87	-1.5
1,721,991	-		Echvi_1499	0.87	-0.4
1,722,014	+		Echvi_1499	0.89	+0.5
1,722,015	-		Echvi_1499	0.89	-0.2
1,722,037	+				+1.2
1,722,072	+				+0.7
1,722,073	-				-0.5
1,722,073	-				+0.2
1,722,074	+				+0.2
1,722,075	-				-1.1
1,722,092	+				-0.4
1,722,097	+				-0.3
1,722,097	+				-0.5
1,722,098	-				-0.5
1,722,102	-				+0.1
1,722,102	-				-0.6
1,722,121	+				+0.1
1,722,186	-				+2.1
1,722,225	-				-2.0
1,722,232	-				-0.6
1,722,234	+				+1.8
1,722,234	+				+3.0
1,722,234	+				+1.0
1,722,235	-				+0.5
1,722,235	-				+0.0
1,722,235	-				+0.6
1,722,235	-				-0.4
1,722,235	-				+0.1
1,722,261	-				+1.1
1,722,261	-				+0.1
1,722,402	-		Echvi_1500	0.11	+1.0
1,722,428	+		Echvi_1500	0.12	-0.6
1,722,428	+		Echvi_1500	0.12	+0.5
1,722,428	+		Echvi_1500	0.12	+0.3
1,722,429	-		Echvi_1500	0.12	-0.4
1,722,505	-		Echvi_1500	0.15	-1.7
1,722,707	+		Echvi_1500	0.22	-0.6
1,722,707	+		Echvi_1500	0.22	+1.3
1,722,741	-		Echvi_1500	0.23	+0.4
1,722,836	-		Echvi_1500	0.27	-1.9
1,722,845	+		Echvi_1500	0.27	-2.3
1,722,846	-		Echvi_1500	0.27	-1.2
1,722,854	-		Echvi_1500	0.28	+1.0
1,722,944	+		Echvi_1500	0.31	+0.2
1,722,945	-		Echvi_1500	0.31	-0.1
1,722,945	-		Echvi_1500	0.31	+0.6
1,722,945	-		Echvi_1500	0.31	+0.1
1,722,973	+		Echvi_1500	0.32	-0.0
1,722,973	+		Echvi_1500	0.32	+1.4
1,722,974	-		Echvi_1500	0.32	-0.4
1,723,046	-		Echvi_1500	0.35	-1.4
1,723,084	-		Echvi_1500	0.36	+1.2
1,723,084	-		Echvi_1500	0.36	+1.9
1,723,084	-		Echvi_1500	0.36	+0.9
1,723,086	-		Echvi_1500	0.36	+2.1