Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1267

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,450,976	-				-1.0
1,450,976	-				+1.9
1,450,976	-				-0.9
1,451,007	+				-0.4
1,451,056	-				-0.8
1,451,075	-				+0.0
1,451,075	-				-0.8
1,451,075	-				+0.6
1,451,077	-				-0.5
1,451,077	-				+2.0
1,451,089	+				-0.4
1,451,177	+				-2.0
1,451,177	+				+1.7
1,451,178	-				+0.9
1,451,178	-				-0.0
1,451,184	-				-1.1
1,451,186	+				-0.9
1,451,207	-				+0.1
1,451,207	-				-1.4
1,451,208	+				-0.3
1,451,208	+				-0.6
1,451,209	-				-0.8
1,451,209	-				+0.2
1,451,283	+				-2.1
1,451,289	-				-0.5
1,451,298	-				+0.6
1,451,339	+				+1.6
1,451,340	-				-0.5
1,451,369	+				-0.1
1,451,370	-				-1.0
1,451,370	-				-0.2
1,451,392	+				-2.0
1,451,496	-				-0.9
1,451,573	+				-0.0
1,451,574	-				-1.7
1,451,581	+				-1.2
1,451,581	+				+0.2
1,451,581	+				-1.1
1,451,581	+				-1.0
1,451,582	-				-0.1
1,451,582	-				-0.2
1,451,582	-				-0.2
1,451,582	-				-0.4
1,451,582	-				-0.3
1,451,582	-				+0.1
1,451,586	-				+0.7
1,451,592	-				-1.8
1,451,603	+				-2.1
1,451,604	-				+0.0
1,451,646	-		Echvi_1266	0.11	-0.5
1,451,695	+		Echvi_1266	0.30	+0.2
1,451,695	+		Echvi_1266	0.30	+2.2
1,451,728	-		Echvi_1266	0.43	+0.8
1,451,728	-		Echvi_1266	0.43	-0.8
1,451,737	-		Echvi_1266	0.46	-0.6
1,451,825	+		Echvi_1266	0.80	+0.5
1,451,866	-				-0.2
1,451,873	+				-0.8
1,451,917	+				-0.0
1,451,917	+				-0.1
1,451,933	+				+0.1
1,451,933	+				-1.8
1,451,933	+				-0.4
1,451,933	+				-0.4
1,451,933	+				+0.5
1,451,933	+				+0.0
1,451,933	+				-0.7
1,451,933	+				+1.0
1,451,934	-				-0.9
1,451,934	-				-1.5
1,451,934	-				-0.9
1,451,934	-				-0.2
1,451,934	-				+1.7
1,451,934	-				-1.8
1,451,934	-				-0.6
1,451,934	-				-1.8
1,451,934	-				-0.5
1,451,934	-				-0.7
1,451,934	-				-0.2
1,451,934	-				+0.7
1,451,934	-				-1.6
1,451,935	+				-0.6
1,451,935	+				+0.6
1,451,935	+				-0.6
1,451,936	-				-1.9
1,451,937	+				+1.3
1,451,937	+				-0.2
1,451,938	-				-0.4
1,451,938	-				+0.5
1,451,938	-				-0.3
1,451,938	-				-0.1
1,451,963	+				-0.3
1,451,964	-				+0.3
1,451,964	-				-1.2
1,451,964	-				+0.7
1,451,998	+				+0.4
1,452,011	+				-2.2
1,452,011	+				-0.2
1,452,012	-				-1.4
1,452,123	-		Echvi_1267	0.12	-1.0
1,452,161	+		Echvi_1267	0.15	+2.0
1,452,242	+		Echvi_1267	0.19	+0.1
1,452,246	-		Echvi_1267	0.20	-1.3
1,452,264	+		Echvi_1267	0.21	+0.0
1,452,286	-		Echvi_1267	0.22	+1.0
1,452,298	+		Echvi_1267	0.23	+0.6
1,452,327	+		Echvi_1267	0.24	-0.5
1,452,328	-		Echvi_1267	0.24	-0.5
1,452,328	-		Echvi_1267	0.24	-0.3
1,452,347	+		Echvi_1267	0.26	-0.2
1,452,347	+		Echvi_1267	0.26	+0.1
1,452,392	-		Echvi_1267	0.28	-1.2
1,452,434	-		Echvi_1267	0.31	-0.4
1,452,437	+		Echvi_1267	0.31	+0.2
1,452,437	+		Echvi_1267	0.31	-0.1
1,452,438	-		Echvi_1267	0.31	-0.0
1,452,448	-		Echvi_1267	0.31	+0.4
1,452,455	+		Echvi_1267	0.32	-0.6
1,452,478	+		Echvi_1267	0.33	-1.0
1,452,479	-		Echvi_1267	0.33	-0.5
1,452,534	+		Echvi_1267	0.37	-1.6
1,452,566	+		Echvi_1267	0.38	-1.0
1,452,566	+		Echvi_1267	0.38	-1.0
1,452,566	+		Echvi_1267	0.38	-1.8
1,452,566	+		Echvi_1267	0.38	-0.2
1,452,567	-		Echvi_1267	0.38	-1.0
1,452,567	-		Echvi_1267	0.38	+1.1
1,452,570	+		Echvi_1267	0.39	-0.8
1,452,591	+		Echvi_1267	0.40	+0.1
1,452,591	+		Echvi_1267	0.40	-1.1
1,452,628	+		Echvi_1267	0.42	-0.6
1,452,629	-		Echvi_1267	0.42	-0.2
1,452,785	-		Echvi_1267	0.51	+0.3
1,452,785	-		Echvi_1267	0.51	-0.1
1,452,818	+		Echvi_1267	0.53	+0.6
1,452,819	-		Echvi_1267	0.53	-0.9
1,452,820	+		Echvi_1267	0.53	+0.8
1,452,820	+		Echvi_1267	0.53	-3.1
1,452,821	-		Echvi_1267	0.53	-0.3
1,452,828	+		Echvi_1267	0.54	+0.8
1,452,829	-		Echvi_1267	0.54	+0.0
1,452,939	-		Echvi_1267	0.60	-0.5
1,452,939	-		Echvi_1267	0.60	+0.4
1,452,939	-		Echvi_1267	0.60	-1.0
1,452,939	-		Echvi_1267	0.60	-1.4
1,453,032	+		Echvi_1267	0.66	-1.0
1,453,211	+		Echvi_1267	0.76	+1.4
1,453,340	-		Echvi_1267	0.84	-1.2
1,453,356	+		Echvi_1267	0.85	+0.4
1,453,356	+		Echvi_1267	0.85	+0.7
1,453,379	+		Echvi_1267	0.86	-2.0
1,453,379	+		Echvi_1267	0.86	-1.0
1,453,379	+		Echvi_1267	0.86	-0.5
1,453,380	-		Echvi_1267	0.86	+1.0
1,453,380	-		Echvi_1267	0.86	-0.4
1,453,380	-		Echvi_1267	0.86	+0.2
1,453,380	-		Echvi_1267	0.86	+1.5
1,453,382	-		Echvi_1267	0.86	+0.2
1,453,483	+				+0.0
1,453,483	+				+0.5
1,453,484	-				+1.6
1,453,484	-				-0.3
1,453,484	-				+1.0
1,453,485	+				-0.7
1,453,573	+				-0.9
1,453,573	+				+0.1
1,453,574	-				-2.9
1,453,633	+				-1.7
1,453,634	-				+0.4
1,453,651	-				+1.6
1,453,698	-				+0.4
1,453,728	-				-2.6
1,453,796	-				+0.1
1,453,814	-				-0.6
1,453,816	-				+0.1
1,453,860	-				-0.6
1,453,865	-				+0.5
1,453,879	-				+0.8
1,453,879	-				+0.3
1,453,884	-				+1.0
1,453,926	-				+1.4
1,453,926	-				-0.4
1,453,933	+				+3.0
1,453,939	+				+0.6
1,454,025	+				-0.3
1,454,047	-				+0.3
1,454,057	+				+0.7
1,454,058	-				-0.2
1,454,058	-				+1.1
1,454,061	-				+2.0
1,454,070	+				+0.3
1,454,070	+				-0.3
1,454,078	+				+1.2
1,454,083	-				-1.7
1,454,096	+				+0.3
1,454,131	-				-2.8
1,454,374	-		Echvi_1268	0.15	-0.6
1,454,385	+		Echvi_1268	0.16	+2.2
1,454,386	-		Echvi_1268	0.16	+0.2
1,454,431	+		Echvi_1268	0.18	+1.0
1,454,432	-		Echvi_1268	0.18	+1.1
1,454,457	+		Echvi_1268	0.19	-0.2
1,454,459	+		Echvi_1268	0.20	-1.3
1,454,460	-		Echvi_1268	0.20	-1.0
1,454,483	+		Echvi_1268	0.21	-0.4
1,454,486	-		Echvi_1268	0.21	+0.7
1,454,597	+		Echvi_1268	0.27	-1.7
1,454,597	+		Echvi_1268	0.27	+1.3
1,454,598	-		Echvi_1268	0.27	+1.6