Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0936

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,078,297	+				+0.1
1,078,298	-				-0.4
1,078,308	+				+0.1
1,078,308	+				-1.8
1,078,308	+				+0.0
1,078,309	-				-0.9
1,078,309	-				-1.4
1,078,318	+				+1.7
1,078,318	+				+1.0
1,078,318	+				-0.3
1,078,318	+				-1.3
1,078,318	+				+0.7
1,078,318	+				-0.2
1,078,318	+				-1.2
1,078,321	+				+1.2
1,078,321	+				-1.3
1,078,383	+				-1.1
1,078,424	+				-1.2
1,078,424	+				+0.0
1,078,424	+				+0.0
1,078,489	+				+2.0
1,078,490	-				-0.5
1,078,561	-				+0.7
1,078,578	-				+0.5
1,078,654	-				-0.3
1,078,747	-				+2.4
1,078,892	+		Echvi_0935	0.51	-1.0
1,078,892	+		Echvi_0935	0.51	+0.4
1,078,892	+		Echvi_0935	0.51	-2.6
1,078,909	+		Echvi_0935	0.56	-0.4
1,078,909	+		Echvi_0935	0.56	-0.8
1,078,910	-		Echvi_0935	0.56	+0.1
1,078,913	+		Echvi_0935	0.57	-2.2
1,079,003	+		Echvi_0935	0.84	-1.8
1,079,004	-		Echvi_0935	0.84	+0.0
1,079,004	-		Echvi_0935	0.84	-1.9
1,079,004	-		Echvi_0935	0.84	+0.2
1,079,004	-		Echvi_0935	0.84	-0.2
1,079,030	+				-1.7
1,079,053	-				+0.9
1,079,054	+				+0.5
1,079,066	+				+1.6
1,079,066	+				-1.2
1,079,066	+				-1.0
1,079,066	+				-0.5
1,079,067	-				+0.2
1,079,067	-				-0.9
1,079,067	-				-3.5
1,079,067	-				+0.9
1,079,071	+				-0.6
1,079,135	-				+0.1
1,079,141	+				+0.1
1,079,141	+				+0.2
1,079,141	+				+0.0
1,079,142	-				+1.2
1,079,142	-				-0.2
1,079,142	-				+0.4
1,079,142	-				-0.4
1,079,145	-				-2.2
1,079,181	-				+0.1
1,079,248	+				+0.2
1,079,248	+				+0.2
1,079,248	+				+0.6
1,079,248	+				-0.6
1,079,248	+				-0.2
1,079,249	-				+0.2
1,079,250	+				+0.1
1,079,250	+				-0.4
1,079,251	-				-1.9
1,079,253	-				+0.4
1,079,253	-				+0.5
1,079,253	-				-0.6
1,079,266	-				+0.3
1,079,279	+				+0.9
1,079,280	-				-0.3
1,079,310	-				+0.4
1,079,320	-				-0.5
1,079,320	-				-2.2
1,079,320	-				+0.3
1,079,364	+				+0.0
1,079,364	+				-0.5
1,079,422	+				-0.6
1,079,422	+				-0.9
1,079,423	-				-0.5
1,079,493	-		Echvi_0936	0.14	+0.9
1,079,493	-		Echvi_0936	0.14	+0.3
1,079,496	+		Echvi_0936	0.14	-1.0
1,079,496	+		Echvi_0936	0.14	-0.2
1,079,496	+		Echvi_0936	0.14	-3.0
1,079,496	+		Echvi_0936	0.14	+2.4
1,079,583	+		Echvi_0936	0.20	+2.4
1,079,584	-		Echvi_0936	0.20	+0.8
1,079,592	+		Echvi_0936	0.21	+0.1
1,079,592	+		Echvi_0936	0.21	+0.0
1,079,593	+		Echvi_0936	0.21	-1.9
1,079,622	+		Echvi_0936	0.23	+0.4
1,079,650	+		Echvi_0936	0.25	+2.1
1,079,650	+		Echvi_0936	0.25	-0.2
1,079,650	+		Echvi_0936	0.25	-1.2
1,079,650	+		Echvi_0936	0.25	+0.6
1,079,651	-		Echvi_0936	0.25	-0.4
1,079,651	-		Echvi_0936	0.25	+1.3
1,079,692	+		Echvi_0936	0.28	+0.4
1,079,692	+		Echvi_0936	0.28	+0.4
1,079,692	+		Echvi_0936	0.28	+0.6
1,079,693	-		Echvi_0936	0.28	+0.4
1,079,693	-		Echvi_0936	0.28	-0.6
1,079,696	+		Echvi_0936	0.28	-0.5
1,079,696	+		Echvi_0936	0.28	+1.5
1,079,696	+		Echvi_0936	0.28	-1.3
1,079,696	+		Echvi_0936	0.28	-0.3
1,079,696	+		Echvi_0936	0.28	+0.9
1,079,696	+		Echvi_0936	0.28	-2.5
1,079,696	+		Echvi_0936	0.28	+0.2
1,079,696	+		Echvi_0936	0.28	-2.1
1,079,696	+		Echvi_0936	0.28	+1.0
1,079,696	+		Echvi_0936	0.28	+0.3
1,079,696	+		Echvi_0936	0.28	+0.2
1,079,696	+		Echvi_0936	0.28	-1.2
1,079,696	+		Echvi_0936	0.28	-0.8
1,079,696	+		Echvi_0936	0.28	-0.1
1,079,697	-		Echvi_0936	0.28	+0.8
1,079,697	-		Echvi_0936	0.28	+0.1
1,079,697	-		Echvi_0936	0.28	+0.4
1,079,697	-		Echvi_0936	0.28	+0.5
1,079,697	-		Echvi_0936	0.28	-0.8
1,079,697	-		Echvi_0936	0.28	-1.0
1,079,697	-		Echvi_0936	0.28	+0.4
1,079,697	-		Echvi_0936	0.28	+2.0
1,079,697	-		Echvi_0936	0.28	+1.0
1,079,697	-		Echvi_0936	0.28	-2.0
1,079,697	-		Echvi_0936	0.28	+1.7
1,079,697	-		Echvi_0936	0.28	-0.2
1,079,697	-		Echvi_0936	0.28	-2.2
1,079,697	-		Echvi_0936	0.28	+2.4
1,079,697	-		Echvi_0936	0.28	+0.7
1,079,697	-		Echvi_0936	0.28	-1.0
1,079,697	-		Echvi_0936	0.28	-0.2
1,079,697	-		Echvi_0936	0.28	+0.8
1,079,697	-		Echvi_0936	0.28	-0.3
1,079,698	+		Echvi_0936	0.28	+3.0
1,079,698	+		Echvi_0936	0.28	-0.2
1,079,699	-		Echvi_0936	0.28	-0.7
1,079,772	+		Echvi_0936	0.33	-1.4
1,079,806	+		Echvi_0936	0.36	-1.0
1,079,854	+		Echvi_0936	0.39	-0.6
1,079,898	+		Echvi_0936	0.42	+0.1
1,079,977	-		Echvi_0936	0.47	+0.6
1,080,022	+		Echvi_0936	0.50	+0.6
1,080,023	-		Echvi_0936	0.50	-0.8
1,080,023	-		Echvi_0936	0.50	+1.0
1,080,032	+		Echvi_0936	0.51	-2.2
1,080,032	+		Echvi_0936	0.51	+0.1
1,080,107	+		Echvi_0936	0.56	-0.3
1,080,138	+		Echvi_0936	0.58	+0.4
1,080,166	+		Echvi_0936	0.60	+0.8
1,080,166	+		Echvi_0936	0.60	+0.9
1,080,167	-		Echvi_0936	0.60	-0.2
1,080,167	-		Echvi_0936	0.60	-2.3
1,080,167	-		Echvi_0936	0.60	+2.0
1,080,191	-		Echvi_0936	0.62	+0.1
1,080,203	+		Echvi_0936	0.63	-0.9
1,080,204	-		Echvi_0936	0.63	+0.1
1,080,208	+		Echvi_0936	0.63	+1.4
1,080,208	+		Echvi_0936	0.63	+0.3
1,080,208	+		Echvi_0936	0.63	+2.3
1,080,209	-		Echvi_0936	0.63	+0.8
1,080,209	-		Echvi_0936	0.63	+0.0
1,080,234	-		Echvi_0936	0.65	+0.2
1,080,246	-		Echvi_0936	0.66	+1.0
1,080,267	+		Echvi_0936	0.67	-1.2
1,080,271	-		Echvi_0936	0.67	+0.2
1,080,275	+		Echvi_0936	0.68	-1.2
1,080,275	+		Echvi_0936	0.68	+0.1
1,080,275	+		Echvi_0936	0.68	+0.2
1,080,275	+		Echvi_0936	0.68	-1.4
1,080,275	+		Echvi_0936	0.68	-2.1
1,080,275	+		Echvi_0936	0.68	-0.4
1,080,276	-		Echvi_0936	0.68	+0.4
1,080,276	-		Echvi_0936	0.68	-0.1
1,080,276	-		Echvi_0936	0.68	+1.2
1,080,276	-		Echvi_0936	0.68	+0.5
1,080,279	-		Echvi_0936	0.68	+0.6
1,080,279	-		Echvi_0936	0.68	+0.0
1,080,337	-		Echvi_0936	0.72	-0.2
1,080,431	+		Echvi_0936	0.78	+0.1
1,080,434	-		Echvi_0936	0.78	+2.6
1,080,434	-		Echvi_0936	0.78	-0.4
1,080,434	-		Echvi_0936	0.78	+0.1
1,080,492	+		Echvi_0936	0.82	-0.9
1,080,492	+		Echvi_0936	0.82	-0.3
1,080,493	-		Echvi_0936	0.82	-1.0
1,080,493	-		Echvi_0936	0.82	+1.0
1,080,493	-		Echvi_0936	0.82	+0.7
1,080,493	-		Echvi_0936	0.82	-1.0
1,080,544	+		Echvi_0936	0.86	+1.0
1,080,545	-		Echvi_0936	0.86	+0.8
1,080,545	-		Echvi_0936	0.86	-0.5
1,080,545	-		Echvi_0936	0.86	-0.1
1,080,586	+		Echvi_0936	0.89	-1.2
1,080,587	-		Echvi_0936	0.89	+0.6
1,080,587	-		Echvi_0936	0.89	-1.5
1,080,588	+		Echvi_0936	0.89	+2.0
1,080,588	+		Echvi_0936	0.89	-0.1
1,080,589	-		Echvi_0936	0.89	+0.4
1,080,589	-		Echvi_0936	0.89	+0.1
1,080,589	-		Echvi_0936	0.89	+1.5
1,080,589	-		Echvi_0936	0.89	-1.6
1,080,589	-		Echvi_0936	0.89	-0.8
1,080,632	+				+1.2
1,080,632	+				-1.7
1,080,633	-				-0.6
1,080,633	-				-0.2
1,080,634	+				-2.8
1,080,635	-				+0.4
1,080,645	-				-0.7
1,080,645	-				-1.2
1,080,695	+				-1.5
1,080,696	-				-0.6
1,080,696	-				-1.3
1,080,706	-				-0.6
1,080,730	-				+0.7
1,080,748	+				+0.6
1,080,796	+				-0.1
1,080,825	+				-0.6
1,080,887	-				+0.8
1,080,887	-				+1.4
1,080,890	-				+0.5
1,080,912	-				+1.1
1,081,061	+				+0.4
1,081,065	+				+1.1
1,081,454	+				-0.9
1,081,465	+				-0.6
1,081,465	+				+1.3
1,081,465	+				-0.3
1,081,471	+				-0.4
1,081,478	+				-0.3
1,081,482	+				+0.4
1,081,482	+				-0.3
1,081,517	-				-1.5
1,081,517	-				-0.8
1,081,517	-				-1.0
1,081,517	-				-0.5